RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 RGPD8O14715 1765 aaPredicted RBP16.1■□□□□ 0.17
LINC00408-201ENST00000447784 PUS7Q96PZ0 661 aaKnown RBP16.1■□□□□ 0.17
LINC00408-201ENST00000447784 QTRT2Q9H974 415 aaKnown RBP16.1■□□□□ 0.17
LINC00408-201ENST00000447784 USP21Q9UK80 565 aa16.1■□□□□ 0.17
LINC00408-201ENST00000447784 LMOD2Q6P5Q4 547 aa16.09■□□□□ 0.17
LINC00408-201ENST00000447784 ACEP12821 1306 aa16.09■□□□□ 0.17
LINC00408-201ENST00000447784 RBM6P78332 1123 aaKnown RBP16.08■□□□□ 0.16
LINC00408-201ENST00000447784 TMC1Q8TDI8 760 aa16.08■□□□□ 0.16
LINC00408-201ENST00000447784 CDK12Q9NYV4 1490 aaPredicted RBP16.08■□□□□ 0.16
LINC00408-201ENST00000447784 HAP1P54257 671 aaPredicted RBP16.07■□□□□ 0.16
LINC00408-201ENST00000447784 TRPC5Q9UL62 973 aaPredicted RBP16.07■□□□□ 0.16
LINC00408-201ENST00000447784 ATAD2Q6PL18 1390 aa16.07■□□□□ 0.16
LINC00408-201ENST00000447784 CABLES1Q8TDN4 633 aa16.06■□□□□ 0.16
LINC00408-201ENST00000447784 PPIP5K1Q6PFW1 1433 aa16.05■□□□□ 0.16
LINC00408-201ENST00000447784 BRD4O60885 1362 aaPredicted RBP16.05■□□□□ 0.16
LINC00408-201ENST00000447784 PAK3O75914 559 aaPredicted RBP16.05■□□□□ 0.16
LINC00408-201ENST00000447784 ITSN1Q15811 1721 aa16.05■□□□□ 0.16
LINC00408-201ENST00000447784 TRPM3Q9HCF6 1732 aaPredicted RBP16.05■□□□□ 0.16
LINC00408-201ENST00000447784 BCL9LQ86UU0 1499 aa16.04■□□□□ 0.16
LINC00408-201ENST00000447784 CABP1Q9NZU7 370 aa16.04■□□□□ 0.16
LINC00408-201ENST00000447784 TOPAZ1Q8N9V7 1692 aa16.04■□□□□ 0.16
LINC00408-201ENST00000447784 QRICH2Q9H0J4 1663 aa16.04■□□□□ 0.16
LINC00408-201ENST00000447784 SLIT2O94813 1529 aa16.04■□□□□ 0.16
LINC00408-201ENST00000447784 ATRNO75882 1429 aa16.03■□□□□ 0.16
LINC00408-201ENST00000447784 UNC5CLQ8IV45 518 aa16.03■□□□□ 0.16
LINC00408-201ENST00000447784 ALS2Q96Q42 1657 aa16.02■□□□□ 0.15
LINC00408-201ENST00000447784 HDGFL2Q7Z4V5 671 aaPredicted RBP16.01■□□□□ 0.15
LINC00408-201ENST00000447784 TERF2IPQ9NYB0 399 aa16.01■□□□□ 0.15
LINC00408-201ENST00000447784 KIF7Q2M1P5 1343 aa16■□□□□ 0.15
LINC00408-201ENST00000447784 FAM83GA6ND36 823 aa16■□□□□ 0.15
LINC00408-201ENST00000447784 C11orf95C9JLR9 678 aaPredicted RBP16■□□□□ 0.15
LINC00408-201ENST00000447784 PLEKHG5O94827 1062 aa16■□□□□ 0.15
LINC00408-201ENST00000447784 GJD4Q96KN9 370 aaPredicted RBP16■□□□□ 0.15
LINC00408-201ENST00000447784 ZNF692Q9BU19 519 aaPredicted RBP16■□□□□ 0.15
LINC00408-201ENST00000447784 SLC12A5Q9H2X9 1139 aa16■□□□□ 0.15
LINC00408-201ENST00000447784 NINLQ9Y2I6 1382 aa16■□□□□ 0.15
LINC00408-201ENST00000447784 ABTB2Q8N961 1025 aa15.99■□□□□ 0.15
LINC00408-201ENST00000447784 ZNF316A6NFI3 1004 aaPredicted RBP15.98■□□□□ 0.15
LINC00408-201ENST00000447784 RGS12O14924 1447 aa15.98■□□□□ 0.15
LINC00408-201ENST00000447784 USP6P35125 1406 aa15.98■□□□□ 0.15
LINC00408-201ENST00000447784 MARF1Q9Y4F3 1742 aaKnown RBP15.97■□□□□ 0.15
LINC00408-201ENST00000447784 VPS72Q15906 364 aa15.97■□□□□ 0.15
LINC00408-201ENST00000447784 NLRP13Q86W25 1043 aa15.97■□□□□ 0.15
LINC00408-201ENST00000447784 CCDC7Q96M83 1385 aa15.97■□□□□ 0.15
LINC00408-201ENST00000447784 USP19O94966 1318 aa15.96■□□□□ 0.15
LINC00408-201ENST00000447784 WASHC2AQ641Q2 1341 aa15.96■□□□□ 0.15
LINC00408-201ENST00000447784 SSH2Q76I76 1423 aa15.96■□□□□ 0.15
LINC00408-201ENST00000447784 ABCA3Q99758 1704 aa15.95■□□□□ 0.14
LINC00408-201ENST00000447784 NUTM2GQ5VZR2 741 aa15.95■□□□□ 0.14
LINC00408-201ENST00000447784 CPSF1Q10570 1443 aaKnown RBP15.94■□□□□ 0.14
LINC00408-201ENST00000447784 PRDM11Q9NQV5 511 aa15.94■□□□□ 0.14
LINC00408-201ENST00000447784 BTG4Q9NY30 223 aa15.94■□□□□ 0.14
LINC00408-201ENST00000447784 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.94■□□□□ 0.14
LINC00408-201ENST00000447784 KTN1Q86UP2 1357 aaKnown RBP15.93■□□□□ 0.14
LINC00408-201ENST00000447784 KIAA0232Q92628 1395 aa15.93■□□□□ 0.14
LINC00408-201ENST00000447784 CPDO75976 1380 aa15.92■□□□□ 0.14
LINC00408-201ENST00000447784 GCP02774 474 aa15.92■□□□□ 0.14
LINC00408-201ENST00000447784 UPF1Q92900 1129 aaKnown RBP eCLIP15.92■□□□□ 0.14
LINC00408-201ENST00000447784 PANK3Q9H999 370 aa15.92■□□□□ 0.14
LINC00408-201ENST00000447784 TTC21BQ7Z4L5 1316 aa15.92■□□□□ 0.14
LINC00408-201ENST00000447784 TTC21AQ8NDW8 1320 aa15.92■□□□□ 0.14
LINC00408-201ENST00000447784 CRYBG1Q9Y4K1 1723 aa15.91■□□□□ 0.14
LINC00408-201ENST00000447784 ANKRD36BQ8N2N9 1353 aa15.91■□□□□ 0.14
LINC00408-201ENST00000447784 ONECUT3O60422 494 aaPredicted RBP15.91■□□□□ 0.14
LINC00408-201ENST00000447784 NLRP6P59044 892 aa15.91■□□□□ 0.14
LINC00408-201ENST00000447784 ZC3H6P61129 1189 aaKnown RBP15.91■□□□□ 0.14
LINC00408-201ENST00000447784 NWD2Q9ULI1 1742 aa15.91■□□□□ 0.14
LINC00408-201ENST00000447784 CCDC9Q9Y3X0 531 aaKnown RBP15.9■□□□□ 0.14
LINC00408-201ENST00000447784 COL14A1Q05707 1796 aaKnown RBP15.9■□□□□ 0.14
LINC00408-201ENST00000447784 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.89■□□□□ 0.13
LINC00408-201ENST00000447784 A0A1W2PP64 1363 aa15.88■□□□□ 0.13
LINC00408-201ENST00000447784 GLI3P10071 1580 aa15.88■□□□□ 0.13
LINC00408-201ENST00000447784 PHRF1Q9P1Y6 1649 aaKnown RBP15.88■□□□□ 0.13
LINC00408-201ENST00000447784 CHRNA2Q15822 529 aa15.88■□□□□ 0.13
LINC00408-201ENST00000447784 KNSTRNQ9Y448 316 aa15.88■□□□□ 0.13
LINC00408-201ENST00000447784 PLCH1Q4KWH8 1693 aa15.88■□□□□ 0.13
LINC00408-201ENST00000447784 CD163L1Q9NR16 1453 aa15.87■□□□□ 0.13
LINC00408-201ENST00000447784 DDX10Q13206 875 aaKnown RBP15.87■□□□□ 0.13
LINC00408-201ENST00000447784 SPATA31A5Q5VU36 1347 aa15.87■□□□□ 0.13
LINC00408-201ENST00000447784 SPATA31A7Q8IWB4 1347 aa15.87■□□□□ 0.13
LINC00408-201ENST00000447784 NRKQ7Z2Y5 1582 aa15.87■□□□□ 0.13
LINC00408-201ENST00000447784 SLIT3O75094 1523 aa15.86■□□□□ 0.13
LINC00408-201ENST00000447784 SEPT12Q8IYM1 358 aa15.86■□□□□ 0.13
LINC00408-201ENST00000447784 KCNH5Q8NCM2 988 aa15.86■□□□□ 0.13
LINC00408-201ENST00000447784 CARD14Q9BXL6 1004 aa15.86■□□□□ 0.13
LINC00408-201ENST00000447784 USP31Q70CQ4 1352 aa15.85■□□□□ 0.13
LINC00408-201ENST00000447784 EDC4Q6P2E9 1401 aaKnown RBP15.85■□□□□ 0.13
LINC00408-201ENST00000447784 NRAPQ86VF7 1730 aa15.84■□□□□ 0.13
LINC00408-201ENST00000447784 CGNL1Q0VF96 1302 aa15.84■□□□□ 0.13
LINC00408-201ENST00000447784 AATKQ6ZMQ8 1374 aa15.84■□□□□ 0.13
LINC00408-201ENST00000447784 EVA1CP58658 441 aa15.83■□□□□ 0.12
LINC00408-201ENST00000447784 MAPK8IP2Q13387 824 aaPredicted RBP15.83■□□□□ 0.12
LINC00408-201ENST00000447784 STRN4Q9NRL3 753 aa15.83■□□□□ 0.12
LINC00408-201ENST00000447784 SPATA31A1Q5TZJ5 1347 aa15.83■□□□□ 0.12
LINC00408-201ENST00000447784 NSD3Q9BZ95 1437 aa15.83■□□□□ 0.12
LINC00408-201ENST00000447784 PIK3C2AO00443 1686 aa15.83■□□□□ 0.12
LINC00408-201ENST00000447784 AKAP12Q02952 1782 aa15.82■□□□□ 0.12
LINC00408-201ENST00000447784 FAM98CQ17RN3 349 aaKnown RBP15.82■□□□□ 0.12
LINC00408-201ENST00000447784 ARHGEF25Q86VW2 580 aa15.82■□□□□ 0.12
LINC00408-201ENST00000447784 NME9Q86XW9 330 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms