RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 RAB3GAP2Q9H2M9 1393 aa3.49□□□□□ -1.85
CHD9-203ENST00000447540 ZRANB2O95218 330 aaKnown RBP eCLIP3.49□□□□□ -1.85
CHD9-203ENST00000447540 OTUD6BQ8N6M0 293 aa3.49□□□□□ -1.85
CHD9-203ENST00000447540 ZNF397Q8NF99 534 aaPredicted RBP3.49□□□□□ -1.85
CHD9-203ENST00000447540 PIBF1Q8WXW3 757 aa3.49□□□□□ -1.85
CHD9-203ENST00000447540 ERLIN1O75477 346 aa3.49□□□□□ -1.85
CHD9-203ENST00000447540 EIF5P55010 431 aaKnown RBP3.49□□□□□ -1.85
CHD9-203ENST00000447540 MICALCLQ6ZW33 695 aa3.49□□□□□ -1.85
CHD9-203ENST00000447540 RAD50Q92878 1312 aa3.49□□□□□ -1.85
CHD9-203ENST00000447540 DCTN1Q14203 1278 aa3.49□□□□□ -1.85
CHD9-203ENST00000447540 SH2D4BQ5SQS7 431 aa3.49□□□□□ -1.85
CHD9-203ENST00000447540 POTEDQ86YR6 584 aa3.49□□□□□ -1.85
CHD9-203ENST00000447540 KIF18AQ8NI77 898 aa3.49□□□□□ -1.85
CHD9-203ENST00000447540 CEP89Q96ST8 783 aa3.49□□□□□ -1.85
CHD9-203ENST00000447540 ROCK1Q13464 1354 aa3.49□□□□□ -1.85
CHD9-203ENST00000447540 CCDC88BA6NC98 1476 aa3.49□□□□□ -1.85
CHD9-203ENST00000447540 GUCY2CP25092 1073 aa3.49□□□□□ -1.85
CHD9-203ENST00000447540 TMCO3Q6UWJ1 677 aa3.48□□□□□ -1.85
CHD9-203ENST00000447540 RNF216Q9NWF9 866 aaPredicted RBP3.48□□□□□ -1.85
CHD9-203ENST00000447540 ANKRD18AQ8IVF6 992 aa3.48□□□□□ -1.85
CHD9-203ENST00000447540 YEATS2Q9ULM3 1422 aa3.48□□□□□ -1.85
CHD9-203ENST00000447540 CCDC171Q6TFL3 1326 aa3.48□□□□□ -1.85
CHD9-203ENST00000447540 SMTNL1A8MU46 457 aa3.48□□□□□ -1.85
CHD9-203ENST00000447540 GBP2P32456 591 aaPredicted RBP3.48□□□□□ -1.85
CHD9-203ENST00000447540 ERICH3Q5RHP9 1530 aa3.48□□□□□ -1.85
CHD9-203ENST00000447540 TMEM51Q9NW97 253 aa3.48□□□□□ -1.85
CHD9-203ENST00000447540 MYBBP1AQ9BQG0 1328 aaKnown RBP3.48□□□□□ -1.85
CHD9-203ENST00000447540 CT47B1P0C2W7 299 aaPredicted RBP3.48□□□□□ -1.85
CHD9-203ENST00000447540 SAMD1Q6SPF0 538 aaPredicted RBP3.48□□□□□ -1.85
CHD9-203ENST00000447540 JRKLQ9Y4A0 524 aa3.48□□□□□ -1.85
CHD9-203ENST00000447540 KIF27Q86VH2 1401 aa3.48□□□□□ -1.85
CHD9-203ENST00000447540 KIF7Q2M1P5 1343 aa3.48□□□□□ -1.85
CHD9-203ENST00000447540 FILIP1LQ4L180 1135 aa3.48□□□□□ -1.85
CHD9-203ENST00000447540 ARID4AP29374 1257 aaPredicted RBP3.48□□□□□ -1.85
CHD9-203ENST00000447540 CT47A1Q5JQC4 288 aaPredicted RBP3.48□□□□□ -1.85
CHD9-203ENST00000447540 TCP11Q8WWU5 503 aa3.48□□□□□ -1.85
CHD9-203ENST00000447540 CCDC34Q96HJ3 373 aa3.48□□□□□ -1.85
CHD9-203ENST00000447540 SPATS2LQ9NUQ6 558 aaKnown RBP3.48□□□□□ -1.85
CHD9-203ENST00000447540 UHRF1BP1LA0JNW5 1464 aa3.48□□□□□ -1.85
CHD9-203ENST00000447540 GOLGA6L10A0A0M3HER8 536 aa3.48□□□□□ -1.85
CHD9-203ENST00000447540 GOLGA6L7A0A1B0GV03 622 aa3.48□□□□□ -1.85
CHD9-203ENST00000447540 GOLGA2Q08379 1002 aa3.48□□□□□ -1.85
CHD9-203ENST00000447540 RWDD2BP57060 319 aa3.47□□□□□ -1.85
CHD9-203ENST00000447540 SWT1Q5T5J6 900 aaKnown RBP3.47□□□□□ -1.85
CHD9-203ENST00000447540 STAG1Q8WVM7 1258 aa3.47□□□□□ -1.85
CHD9-203ENST00000447540 NOL10Q9BSC4 688 aaKnown RBP3.47□□□□□ -1.85
CHD9-203ENST00000447540 FMN1Q68DA7 1419 aa3.47□□□□□ -1.85
CHD9-203ENST00000447540 GBP7Q8N8V2 638 aaPredicted RBP3.47□□□□□ -1.85
CHD9-203ENST00000447540 GOLGA5Q8TBA6 731 aa3.47□□□□□ -1.85
CHD9-203ENST00000447540 ZNF592Q92610 1267 aa3.47□□□□□ -1.85
CHD9-203ENST00000447540 IPO8O15397 1037 aaKnown RBP3.47□□□□□ -1.85
CHD9-203ENST00000447540 CCDC30Q5VVM6 783 aa3.47□□□□□ -1.85
CHD9-203ENST00000447540 NAP1L3Q99457 506 aaPredicted RBP3.47□□□□□ -1.85
CHD9-203ENST00000447540 RSPH14Q9UHP6 348 aa3.47□□□□□ -1.85
CHD9-203ENST00000447540 CCDC70Q6NSX1 233 aa3.47□□□□□ -1.85
CHD9-203ENST00000447540 KIAA1107Q9UPP5 1409 aa3.47□□□□□ -1.85
CHD9-203ENST00000447540 GZF1Q9H116 711 aaPredicted RBP3.47□□□□□ -1.85
CHD9-203ENST00000447540 BATF3Q9NR55 127 aa3.47□□□□□ -1.85
CHD9-203ENST00000447540 ERO1AQ96HE7 468 aa3.47□□□□□ -1.85
CHD9-203ENST00000447540 C22orf23Q9BZE7 217 aa3.47□□□□□ -1.85
CHD9-203ENST00000447540 EZRP15311 586 aaKnown RBP3.47□□□□□ -1.85
CHD9-203ENST00000447540 NF2P35240 595 aa3.47□□□□□ -1.85
CHD9-203ENST00000447540 MNAT1P51948 309 aa3.47□□□□□ -1.85
CHD9-203ENST00000447540 ZRSR2Q15696 482 aaKnown RBP3.47□□□□□ -1.85
CHD9-203ENST00000447540 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.47□□□□□ -1.85
CHD9-203ENST00000447540 TRAF1Q13077 416 aa3.47□□□□□ -1.85
CHD9-203ENST00000447540 TUBB2AQ13885 445 aa3.47□□□□□ -1.85
CHD9-203ENST00000447540 EFCAB13Q8IY85 973 aa3.47□□□□□ -1.85
CHD9-203ENST00000447540 EXOC4Q96A65 974 aa3.47□□□□□ -1.85
CHD9-203ENST00000447540 TUBB2BQ9BVA1 445 aa3.47□□□□□ -1.85
CHD9-203ENST00000447540 AKAP17AQ02040 695 aaKnown RBP3.47□□□□□ -1.85
CHD9-203ENST00000447540 SETD1BQ9UPS6 1966 aaKnown RBP3.47□□□□□ -1.85
CHD9-203ENST00000447540 WDR78Q5VTH9 848 aa3.46□□□□□ -1.85
CHD9-203ENST00000447540 GBP6Q6ZN66 633 aa3.46□□□□□ -1.85
CHD9-203ENST00000447540 CLEC17AQ6ZS10 378 aa3.46□□□□□ -1.85
CHD9-203ENST00000447540 DTNBP1Q96EV8 351 aa3.46□□□□□ -1.85
CHD9-203ENST00000447540 PDLIM2Q96JY6 352 aa3.46□□□□□ -1.85
CHD9-203ENST00000447540 SCRIBQ14160 1630 aa3.46□□□□□ -1.85
CHD9-203ENST00000447540 KIAA0754O94854 1291 aa3.46□□□□□ -1.85
CHD9-203ENST00000447540 PSMD7P51665 324 aa3.46□□□□□ -1.85
CHD9-203ENST00000447540 RNF168Q8IYW5 571 aaPredicted RBP3.46□□□□□ -1.85
CHD9-203ENST00000447540 UBXN4Q92575 508 aa3.46□□□□□ -1.85
CHD9-203ENST00000447540 BRPF1P55201 1214 aaPredicted RBP3.46□□□□□ -1.86
CHD9-203ENST00000447540 NEDD9Q14511 834 aa3.46□□□□□ -1.86
CHD9-203ENST00000447540 TERF2Q15554 542 aa3.46□□□□□ -1.86
CHD9-203ENST00000447540 SMC5Q8IY18 1101 aa3.46□□□□□ -1.86
CHD9-203ENST00000447540 RNF214Q8ND24 703 aa3.46□□□□□ -1.86
CHD9-203ENST00000447540 DCAF11Q8TEB1 546 aa3.46□□□□□ -1.86
CHD9-203ENST00000447540 TBC1D32Q96NH3 1257 aa3.46□□□□□ -1.86
CHD9-203ENST00000447540 UACAQ9BZF9 1416 aa3.46□□□□□ -1.86
CHD9-203ENST00000447540 MCM6Q14566 821 aa3.46□□□□□ -1.86
CHD9-203ENST00000447540 SMC2O95347 1197 aa3.46□□□□□ -1.86
CHD9-203ENST00000447540 FKBP5Q13451 457 aaPredicted RBP3.46□□□□□ -1.86
CHD9-203ENST00000447540 GSDMDP57764 484 aa3.46□□□□□ -1.86
CHD9-203ENST00000447540 CBX1P83916 185 aa3.46□□□□□ -1.86
CHD9-203ENST00000447540 NOLC1Q14978 699 aaKnown RBP eCLIP3.46□□□□□ -1.86
CHD9-203ENST00000447540 TSPY26PQ9H489 355 aa3.46□□□□□ -1.86
CHD9-203ENST00000447540 MAGEA9P43362 315 aa3.46□□□□□ -1.86
CHD9-203ENST00000447540 MMS22LQ6ZRQ5 1243 aa3.46□□□□□ -1.86
CHD9-203ENST00000447540 CARD10Q9BWT7 1032 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms