RNA–Protein interactions for RNA: ENST00000447431.6

SRRM1-203, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SRRM1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-203ENST00000447431 NRDCO43847 1150 aa6□□□□□ -1.45
SRRM1-203ENST00000447431 BCL2L13Q9BXK5 485 aa6□□□□□ -1.45
SRRM1-203ENST00000447431 POLR1AO95602 1720 aaPredicted RBP5.99□□□□□ -1.45
SRRM1-203ENST00000447431 SNAPC4Q5SXM2 1469 aa5.99□□□□□ -1.45
SRRM1-203ENST00000447431 CDC45O75419 566 aa5.99□□□□□ -1.45
SRRM1-203ENST00000447431 REC8O95072 547 aa5.99□□□□□ -1.45
SRRM1-203ENST00000447431 MYRIPQ8NFW9 859 aa5.99□□□□□ -1.45
SRRM1-203ENST00000447431 ZNF428Q96B54 188 aa5.99□□□□□ -1.45
SRRM1-203ENST00000447431 FEZ1Q99689 392 aa5.99□□□□□ -1.45
SRRM1-203ENST00000447431 ABCC5O15440 1437 aa5.99□□□□□ -1.45
SRRM1-203ENST00000447431 PLEKHH1Q9ULM0 1364 aa5.99□□□□□ -1.45
SRRM1-203ENST00000447431 RARSP54136 660 aaKnown RBP5.99□□□□□ -1.45
SRRM1-203ENST00000447431 ZSCAN23Q3MJ62 389 aa5.99□□□□□ -1.45
SRRM1-203ENST00000447431 ANKRD45Q5TZF3 282 aa5.99□□□□□ -1.45
SRRM1-203ENST00000447431 GRIN2BQ13224 1484 aa5.99□□□□□ -1.45
SRRM1-203ENST00000447431 MCM2P49736 904 aa5.98□□□□□ -1.45
SRRM1-203ENST00000447431 RIPK4P57078 832 aa5.98□□□□□ -1.45
SRRM1-203ENST00000447431 CACNB1Q02641 598 aaPredicted RBP5.98□□□□□ -1.45
SRRM1-203ENST00000447431 FLIIQ13045 1269 aa5.98□□□□□ -1.45
SRRM1-203ENST00000447431 LRSAM1Q6UWE0 723 aa5.98□□□□□ -1.45
SRRM1-203ENST00000447431 GPIHBP1Q8IV16 184 aa5.98□□□□□ -1.45
SRRM1-203ENST00000447431 RNF214Q8ND24 703 aa5.98□□□□□ -1.45
SRRM1-203ENST00000447431 GCC1Q96CN9 775 aa5.98□□□□□ -1.45
SRRM1-203ENST00000447431 LNPKQ9C0E8 428 aa5.98□□□□□ -1.45
SRRM1-203ENST00000447431 PRDM4Q9UKN5 801 aa5.98□□□□□ -1.45
SRRM1-203ENST00000447431 ATP6V1DQ9Y5K8 247 aa5.98□□□□□ -1.45
SRRM1-203ENST00000447431 GPRASP1Q5JY77 1395 aa5.98□□□□□ -1.45
SRRM1-203ENST00000447431 CUL7Q14999 1698 aa5.98□□□□□ -1.45
SRRM1-203ENST00000447431 TESPA1A2RU30 521 aaPredicted RBP5.98□□□□□ -1.45
SRRM1-203ENST00000447431 SSFA2P28290 1259 aa5.98□□□□□ -1.45
SRRM1-203ENST00000447431 UVSSAQ2YD98 709 aa5.98□□□□□ -1.45
SRRM1-203ENST00000447431 GAS2L3Q86XJ1 694 aa5.98□□□□□ -1.45
SRRM1-203ENST00000447431 WWC1Q8IX03 1113 aa5.98□□□□□ -1.45
SRRM1-203ENST00000447431 DRC7Q8IY82 874 aa5.98□□□□□ -1.45
SRRM1-203ENST00000447431 CALCOCO1Q9P1Z2 691 aa5.98□□□□□ -1.45
SRRM1-203ENST00000447431 CAMSAP2Q08AD1 1489 aa5.98□□□□□ -1.45
SRRM1-203ENST00000447431 ZNF644Q9H582 1327 aaPredicted RBP5.98□□□□□ -1.45
SRRM1-203ENST00000447431 HDAC1Q13547 482 aaPredicted RBP5.98□□□□□ -1.45
SRRM1-203ENST00000447431 CGNQ9P2M7 1197 aaKnown RBP5.98□□□□□ -1.45
SRRM1-203ENST00000447431 EPRSP07814 1512 aaKnown RBP5.98□□□□□ -1.45
SRRM1-203ENST00000447431 CC2D2AQ9P2K1 1620 aa5.98□□□□□ -1.45
SRRM1-203ENST00000447431 BMP2KLQ5H9B9 411 aa5.97□□□□□ -1.45
SRRM1-203ENST00000447431 INTS3Q68E01 1043 aaKnown RBP5.97□□□□□ -1.45
SRRM1-203ENST00000447431 BARGINQ6ZT62 677 aa5.97□□□□□ -1.45
SRRM1-203ENST00000447431 PCDHB15Q9Y5E8 787 aa5.97□□□□□ -1.45
SRRM1-203ENST00000447431 U2AF1L5P0DN76 240 aaPredicted RBP5.97□□□□□ -1.45
SRRM1-203ENST00000447431 PYGBP11216 843 aa5.97□□□□□ -1.45
SRRM1-203ENST00000447431 U2AF1Q01081 240 aaKnown RBP eCLIP5.97□□□□□ -1.451e-8■■■□□ 14.8
SRRM1-203ENST00000447431 TAF7LQ5H9L4 462 aa5.97□□□□□ -1.45
SRRM1-203ENST00000447431 TEX35Q5T0J7 233 aa5.97□□□□□ -1.45
SRRM1-203ENST00000447431 DNAJC2Q99543 621 aaKnown RBP5.97□□□□□ -1.45
SRRM1-203ENST00000447431 KDM5CP41229 1560 aa5.97□□□□□ -1.45
SRRM1-203ENST00000447431 NAP1L2Q9ULW6 460 aaPredicted RBP5.97□□□□□ -1.45
SRRM1-203ENST00000447431 POLA1P09884 1462 aaPredicted RBP5.96□□□□□ -1.45
SRRM1-203ENST00000447431 SYCE3A1L190 88 aa5.96□□□□□ -1.45
SRRM1-203ENST00000447431 NOLC1Q14978 699 aaKnown RBP eCLIP5.96□□□□□ -1.45
SRRM1-203ENST00000447431 CHD1LQ86WJ1 897 aa5.96□□□□□ -1.45
SRRM1-203ENST00000447431 TCP11L2Q8N4U5 519 aa5.96□□□□□ -1.45
SRRM1-203ENST00000447431 PIK3C2GO75747 1445 aa5.96□□□□□ -1.45
SRRM1-203ENST00000447431 ZNF521Q96K83 1311 aa5.96□□□□□ -1.45
SRRM1-203ENST00000447431 ABCA10Q8WWZ4 1543 aa5.96□□□□□ -1.46
SRRM1-203ENST00000447431 PDE4DQ08499 809 aa5.96□□□□□ -1.46
SRRM1-203ENST00000447431 TRMT2AQ8IZ69 625 aaKnown RBP5.96□□□□□ -1.46
SRRM1-203ENST00000447431 RRP7AQ9Y3A4 280 aaKnown RBP5.96□□□□□ -1.46
SRRM1-203ENST00000447431 SPDYE2BA6NHP3 402 aa5.96□□□□□ -1.46
SRRM1-203ENST00000447431 SPDYE6P0CI01 402 aa5.96□□□□□ -1.46
SRRM1-203ENST00000447431 HSP90B1P14625 803 aaKnown RBP5.96□□□□□ -1.46
SRRM1-203ENST00000447431 GABPB1Q06547 395 aaPredicted RBP5.96□□□□□ -1.46
SRRM1-203ENST00000447431 GPS2Q13227 327 aa5.96□□□□□ -1.46
SRRM1-203ENST00000447431 SPDYE2Q495Y8 402 aa5.96□□□□□ -1.46
SRRM1-203ENST00000447431 ATF7IPQ6VMQ6 1270 aa5.96□□□□□ -1.46
SRRM1-203ENST00000447431 TIGD1Q96MW7 591 aa5.96□□□□□ -1.46
SRRM1-203ENST00000447431 FAM117AQ9C073 453 aa5.96□□□□□ -1.46
SRRM1-203ENST00000447431 TDRD9Q8NDG6 1382 aaKnown RBP5.95□□□□□ -1.46
SRRM1-203ENST00000447431 GOLGA6L4A6NEF3 574 aa5.95□□□□□ -1.46
SRRM1-203ENST00000447431 PRIM1P49642 420 aaKnown RBP5.95□□□□□ -1.46
SRRM1-203ENST00000447431 CREBRFQ8IUR6 639 aa5.95□□□□□ -1.46
SRRM1-203ENST00000447431 GOLGA6L1Q8N7Z2 621 aa5.95□□□□□ -1.46
SRRM1-203ENST00000447431 OGFRQ9NZT2 677 aa5.95□□□□□ -1.46
SRRM1-203ENST00000447431 FANCD2Q9BXW9 1451 aa5.95□□□□□ -1.46
SRRM1-203ENST00000447431 RBM26Q5T8P6 1007 aaKnown RBP5.95□□□□□ -1.46
SRRM1-203ENST00000447431 PIBF1Q8WXW3 757 aa5.95□□□□□ -1.46
SRRM1-203ENST00000447431 U2SURPO15042 1029 aaKnown RBP5.94□□□□□ -1.46
SRRM1-203ENST00000447431 CCDC112Q8NEF3 446 aa5.94□□□□□ -1.46
SRRM1-203ENST00000447431 PDLIM2Q96JY6 352 aa5.94□□□□□ -1.46
SRRM1-203ENST00000447431 RBSNQ9H1K0 784 aa5.94□□□□□ -1.46
SRRM1-203ENST00000447431 PZPP20742 1482 aa5.94□□□□□ -1.46
SRRM1-203ENST00000447431 MBD5Q9P267 1494 aa5.94□□□□□ -1.46
SRRM1-203ENST00000447431 COL17A1Q9UMD9 1497 aaPredicted RBP5.94□□□□□ -1.46
SRRM1-203ENST00000447431 RAD54L2Q9Y4B4 1467 aa5.94□□□□□ -1.46
SRRM1-203ENST00000447431 IPO4Q8TEX9 1081 aaKnown RBP5.94□□□□□ -1.46
SRRM1-203ENST00000447431 DENND4BO75064 1496 aaPredicted RBP5.94□□□□□ -1.46
SRRM1-203ENST00000447431 NPC1L1Q9UHC9 1359 aa5.94□□□□□ -1.46
SRRM1-203ENST00000447431 GAPVD1Q14C86 1478 aa5.93□□□□□ -1.46
SRRM1-203ENST00000447431 KCNJ4P48050 445 aa5.93□□□□□ -1.46
SRRM1-203ENST00000447431 FAM193AP78312 1265 aa5.93□□□□□ -1.46
SRRM1-203ENST00000447431 CLEC17AQ6ZS10 378 aa5.93□□□□□ -1.46
SRRM1-203ENST00000447431 IFT57Q9NWB7 429 aa5.93□□□□□ -1.46
SRRM1-203ENST00000447431 CWC15Q9P013 229 aaKnown RBP5.93□□□□□ -1.46
SRRM1-203ENST00000447431 HMMRO75330 724 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms