RNA–Protein interactions for RNA: ENST00000447079.4

CDK12-202, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK12, Length 8,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-202ENST00000447079 GOLGA6L19H0YKK7 550 aa8.52□□□□□ -1.05
CDK12-202ENST00000447079 ELL2O00472 640 aaPredicted RBP8.52□□□□□ -1.05
CDK12-202ENST00000447079 PSMA5P28066 241 aa8.52□□□□□ -1.05
CDK12-202ENST00000447079 CTDP1Q9Y5B0 961 aaPredicted RBP8.52□□□□□ -1.05
CDK12-202ENST00000447079 PDE4AP27815 886 aa8.52□□□□□ -1.05
CDK12-202ENST00000447079 CNTROBQ8N137 903 aa8.52□□□□□ -1.05
CDK12-202ENST00000447079 PDE3AQ14432 1141 aa8.52□□□□□ -1.05
CDK12-202ENST00000447079 ZNF518AQ6AHZ1 1483 aa8.52□□□□□ -1.05
CDK12-202ENST00000447079 WDR62O43379 1518 aa8.52□□□□□ -1.05
CDK12-202ENST00000447079 CCT4P50991 539 aaKnown RBP8.51□□□□□ -1.05
CDK12-202ENST00000447079 TPD52L1Q16890 204 aaPredicted RBP8.51□□□□□ -1.05
CDK12-202ENST00000447079 FAM43AQ8N2R8 423 aa8.51□□□□□ -1.05
CDK12-202ENST00000447079 KCNH5Q8NCM2 988 aa8.51□□□□□ -1.05
CDK12-202ENST00000447079 ANKRD20A12PQ8NF67 263 aa8.51□□□□□ -1.05
CDK12-202ENST00000447079 CPLX1O14810 134 aa8.51□□□□□ -1.05
CDK12-202ENST00000447079 GGNBP2Q9H3C7 697 aa8.51□□□□□ -1.05
CDK12-202ENST00000447079 HMOX1P09601 288 aa8.51□□□□□ -1.05
CDK12-202ENST00000447079 CEP89Q96ST8 783 aa8.51□□□□□ -1.05
CDK12-202ENST00000447079 NUCB2P80303 420 aa8.51□□□□□ -1.05
CDK12-202ENST00000447079 LRPPRCP42704 1394 aaKnown RBP8.51□□□□□ -1.05
CDK12-202ENST00000447079 MCM2P49736 904 aa8.51□□□□□ -1.05
CDK12-202ENST00000447079 KDM5BQ9UGL1 1544 aa8.5□□□□□ -1.05
CDK12-202ENST00000447079 MSH5O43196 834 aa8.5□□□□□ -1.05
CDK12-202ENST00000447079 FAM13BQ9NYF5 915 aa8.5□□□□□ -1.05
CDK12-202ENST00000447079 ANO2Q9NQ90 1003 aa8.5□□□□□ -1.05
CDK12-202ENST00000447079 VPS53Q5VIR6 699 aa8.5□□□□□ -1.05
CDK12-202ENST00000447079 APPP05067 770 aa8.5□□□□□ -1.05
CDK12-202ENST00000447079 GCC1Q96CN9 775 aa8.5□□□□□ -1.05
CDK12-202ENST00000447079 XBP1P17861 261 aa8.5□□□□□ -1.05
CDK12-202ENST00000447079 SAFBQ15424 915 aaKnown RBP eCLIP8.5□□□□□ -1.05
CDK12-202ENST00000447079 BRMS1Q9HCU9 246 aa8.5□□□□□ -1.05
CDK12-202ENST00000447079 RPRD2Q5VT52 1461 aaKnown RBP8.5□□□□□ -1.05
CDK12-202ENST00000447079 A0A0U1RQG5 324 aaPredicted RBP8.5□□□□□ -1.05
CDK12-202ENST00000447079 SLC3A2P08195 630 aaKnown RBP8.5□□□□□ -1.05
CDK12-202ENST00000447079 SCAF11Q99590 1463 aaKnown RBP8.49□□□□□ -1.05
CDK12-202ENST00000447079 RALYLQ86SE5 291 aaKnown RBP8.49□□□□□ -1.05
CDK12-202ENST00000447079 SHANK2Q9UPX8 1470 aa8.49□□□□□ -1.05
CDK12-202ENST00000447079 KIF1BO60333 1816 aa8.49□□□□□ -1.05
CDK12-202ENST00000447079 TBC1D2BQ9UPU7 963 aa8.49□□□□□ -1.05
CDK12-202ENST00000447079 DNMT1P26358 1616 aaKnown RBP8.49□□□□□ -1.05
CDK12-202ENST00000447079 EXOC6Q8TAG9 804 aa8.49□□□□□ -1.05
CDK12-202ENST00000447079 CDC45O75419 566 aa8.49□□□□□ -1.05
CDK12-202ENST00000447079 CLASRPQ8N2M8 674 aaKnown RBP8.49□□□□□ -1.05
CDK12-202ENST00000447079 WDR7Q9Y4E6 1490 aa8.49□□□□□ -1.05
CDK12-202ENST00000447079 ABCC11Q96J66 1382 aa8.49□□□□□ -1.05
CDK12-202ENST00000447079 GNL3LQ9NVN8 582 aaKnown RBP8.49□□□□□ -1.05
CDK12-202ENST00000447079 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.49□□□□□ -1.05
CDK12-202ENST00000447079 GPS2Q13227 327 aa8.48□□□□□ -1.05
CDK12-202ENST00000447079 SART3Q15020 963 aaKnown RBP8.48□□□□□ -1.05
CDK12-202ENST00000447079 TCP11L2Q8N4U5 519 aa8.48□□□□□ -1.05
CDK12-202ENST00000447079 GNAI2P04899 355 aa8.48□□□□□ -1.05
CDK12-202ENST00000447079 TEX35Q5T0J7 233 aa8.48□□□□□ -1.05
CDK12-202ENST00000447079 GCC2Q8IWJ2 1684 aa8.48□□□□□ -1.05
CDK12-202ENST00000447079 ZNF608Q9ULD9 1512 aaPredicted RBP8.48□□□□□ -1.05
CDK12-202ENST00000447079 SRCIN1Q9C0H9 1055 aa8.48□□□□□ -1.05
CDK12-202ENST00000447079 NUP160Q12769 1436 aa8.48□□□□□ -1.05
CDK12-202ENST00000447079 NSD3Q9BZ95 1437 aa8.48□□□□□ -1.05
CDK12-202ENST00000447079 CALRP27797 417 aaKnown RBP8.48□□□□□ -1.05
CDK12-202ENST00000447079 PRKAR2BP31323 418 aa8.48□□□□□ -1.05
CDK12-202ENST00000447079 PLIN1O60240 522 aa8.48□□□□□ -1.05
CDK12-202ENST00000447079 FCHSD2O94868 740 aa8.48□□□□□ -1.05
CDK12-202ENST00000447079 GPATCH8Q9UKJ3 1502 aaKnown RBP8.48□□□□□ -1.05
CDK12-202ENST00000447079 CCDC61Q9Y6R9 512 aa8.48□□□□□ -1.05
CDK12-202ENST00000447079 RAPGEF3O95398 923 aa8.47□□□□□ -1.05
CDK12-202ENST00000447079 CCDC70Q6NSX1 233 aa8.47□□□□□ -1.05
CDK12-202ENST00000447079 BECN2A8MW95 431 aa8.47□□□□□ -1.05
CDK12-202ENST00000447079 ADAMTS8Q9UP79 889 aa8.47□□□□□ -1.05
CDK12-202ENST00000447079 PDIA4P13667 645 aaKnown RBP8.47□□□□□ -1.05
CDK12-202ENST00000447079 NFXL1Q6ZNB6 911 aa8.47□□□□□ -1.05
CDK12-202ENST00000447079 SYCP2Q9BX26 1530 aa8.47□□□□□ -1.05
CDK12-202ENST00000447079 DHX29Q7Z478 1369 aaKnown RBP8.47□□□□□ -1.05
CDK12-202ENST00000447079 DHX16O60231 1041 aaKnown RBP8.47□□□□□ -1.05
CDK12-202ENST00000447079 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.47□□□□□ -1.058e-8■■■■□ 25
CDK12-202ENST00000447079 PDCP20941 246 aa8.47□□□□□ -1.05
CDK12-202ENST00000447079 NOM1Q5C9Z4 860 aaKnown RBP8.46□□□□□ -1.05
CDK12-202ENST00000447079 CHMP5Q9NZZ3 219 aa8.46□□□□□ -1.05
CDK12-202ENST00000447079 TWISTNBQ3B726 338 aaPredicted RBP8.46□□□□□ -1.05
CDK12-202ENST00000447079 MCTP1Q6DN14 999 aa8.46□□□□□ -1.05
CDK12-202ENST00000447079 NOL8Q76FK4 1167 aaKnown RBP8.46□□□□□ -1.05
CDK12-202ENST00000447079 RRP9O43818 475 aaKnown RBP8.46□□□□□ -1.05
CDK12-202ENST00000447079 DDX49Q9Y6V7 483 aaKnown RBP8.46□□□□□ -1.05
CDK12-202ENST00000447079 CABP1Q9NZU7 370 aa8.46□□□□□ -1.06
CDK12-202ENST00000447079 SMC3Q9UQE7 1217 aa8.46□□□□□ -1.06
CDK12-202ENST00000447079 PLCH2O75038 1416 aa8.46□□□□□ -1.06
CDK12-202ENST00000447079 CCDC66A2RUB6 948 aa8.46□□□□□ -1.06
CDK12-202ENST00000447079 CABP4P57796 275 aa8.46□□□□□ -1.06
CDK12-202ENST00000447079 ABCC10Q5T3U5 1492 aa8.45□□□□□ -1.06
CDK12-202ENST00000447079 ZSCAN25Q6NSZ9 544 aa8.45□□□□□ -1.06
CDK12-202ENST00000447079 NECTIN2Q92692 538 aa8.45□□□□□ -1.06
CDK12-202ENST00000447079 DCAF8L1A6NGE4 600 aa8.45□□□□□ -1.06
CDK12-202ENST00000447079 IPO7O95373 1038 aaKnown RBP8.45□□□□□ -1.06
CDK12-202ENST00000447079 DMRT2Q9Y5R5 561 aa8.45□□□□□ -1.06
CDK12-202ENST00000447079 NAT10Q9H0A0 1025 aaKnown RBP8.45□□□□□ -1.06
CDK12-202ENST00000447079 MAST1Q9Y2H9 1570 aa8.45□□□□□ -1.06
CDK12-202ENST00000447079 LETM1O95202 739 aaPredicted RBP8.44□□□□□ -1.06
CDK12-202ENST00000447079 ANKRD1Q15327 319 aa8.44□□□□□ -1.06
CDK12-202ENST00000447079 A2MP01023 1474 aa8.44□□□□□ -1.06
CDK12-202ENST00000447079 RALGAPBQ86X10 1494 aa8.44□□□□□ -1.06
CDK12-202ENST00000447079 AMOTQ4VCS5 1084 aa8.44□□□□□ -1.06
CDK12-202ENST00000447079 NBPF1Q3BBV0 1214 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms