RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 FEZ1Q99689 392 aa10.55□□□□□ -0.72
MCF2L2-203ENST00000447025 SUGT1Q9Y2Z0 365 aa10.55□□□□□ -0.72
MCF2L2-203ENST00000447025 RPGRIP1LQ68CZ1 1315 aa10.55□□□□□ -0.72
MCF2L2-203ENST00000447025 CADPS2Q86UW7 1296 aa10.54□□□□□ -0.72
MCF2L2-203ENST00000447025 FAM184AQ8NB25 1140 aa10.54□□□□□ -0.72
MCF2L2-203ENST00000447025 TBC1D22AQ8WUA7 517 aa10.54□□□□□ -0.72
MCF2L2-203ENST00000447025 TEX13AQ9BXU3 409 aaPredicted RBP10.54□□□□□ -0.72
MCF2L2-203ENST00000447025 PAX3P23760 479 aa10.54□□□□□ -0.72
MCF2L2-203ENST00000447025 PUS10Q3MIT2 529 aaKnown RBP10.54□□□□□ -0.72
MCF2L2-203ENST00000447025 LONRF3Q496Y0 759 aa10.54□□□□□ -0.72
MCF2L2-203ENST00000447025 CCDC91Q7Z6B0 441 aa10.54□□□□□ -0.72
MCF2L2-203ENST00000447025 RPAINQ86UA6 219 aa10.54□□□□□ -0.72
MCF2L2-203ENST00000447025 RASSF4Q9H2L5 321 aa10.54□□□□□ -0.72
MCF2L2-203ENST00000447025 GRPEL1Q9HAV7 217 aa10.54□□□□□ -0.72
MCF2L2-203ENST00000447025 SKILP12757 684 aa10.53□□□□□ -0.72
MCF2L2-203ENST00000447025 MAP9Q49MG5 647 aa10.53□□□□□ -0.72
MCF2L2-203ENST00000447025 NAT1P18440 290 aa10.53□□□□□ -0.72
MCF2L2-203ENST00000447025 ZSCAN26Q16670 478 aa10.53□□□□□ -0.72
MCF2L2-203ENST00000447025 SNRNP27Q8WVK2 155 aaKnown RBP10.53□□□□□ -0.72
MCF2L2-203ENST00000447025 ARPC5LQ9BPX5 153 aa10.53□□□□□ -0.72
MCF2L2-203ENST00000447025 PPFIA4O75335 1185 aa10.52□□□□□ -0.73
MCF2L2-203ENST00000447025 ANKRD18BA2A2Z9 1011 aa10.52□□□□□ -0.73
MCF2L2-203ENST00000447025 FAM163BP0C2L3 166 aa10.52□□□□□ -0.73
MCF2L2-203ENST00000447025 INHBEP58166 350 aa10.52□□□□□ -0.73
MCF2L2-203ENST00000447025 HS1BP3Q53T59 392 aa10.52□□□□□ -0.73
MCF2L2-203ENST00000447025 NUTM2GQ5VZR2 741 aa10.52□□□□□ -0.73
MCF2L2-203ENST00000447025 ANKRD13AQ8IZ07 590 aa10.52□□□□□ -0.73
MCF2L2-203ENST00000447025 PPP2R5AQ15172 486 aa10.51□□□□□ -0.73
MCF2L2-203ENST00000447025 MORC1Q86VD1 984 aa10.51□□□□□ -0.73
MCF2L2-203ENST00000447025 ZNF710Q8N1W2 664 aa10.51□□□□□ -0.73
MCF2L2-203ENST00000447025 ARAP1Q96P48 1450 aa10.51□□□□□ -0.73
MCF2L2-203ENST00000447025 SYNRGQ9UMZ2 1314 aa10.51□□□□□ -0.73
MCF2L2-203ENST00000447025 SMAPO00193 183 aa10.51□□□□□ -0.73
MCF2L2-203ENST00000447025 EXOC5O00471 708 aa10.51□□□□□ -0.73
MCF2L2-203ENST00000447025 MYRIPQ8NFW9 859 aa10.51□□□□□ -0.73
MCF2L2-203ENST00000447025 UPF2Q9HAU5 1272 aaKnown RBP10.51□□□□□ -0.73
MCF2L2-203ENST00000447025 OGFRQ9NZT2 677 aa10.51□□□□□ -0.73
MCF2L2-203ENST00000447025 PES1O00541 588 aaKnown RBP10.5□□□□□ -0.73
MCF2L2-203ENST00000447025 GTF2F1P35269 517 aaKnown RBP eCLIP10.5□□□□□ -0.73
MCF2L2-203ENST00000447025 NAP1L1P55209 391 aaKnown RBP10.5□□□□□ -0.73
MCF2L2-203ENST00000447025 MAMSTRQ6ZN01 415 aa10.5□□□□□ -0.73
MCF2L2-203ENST00000447025 PPP1R9BQ96SB3 815 aa10.5□□□□□ -0.73
MCF2L2-203ENST00000447025 LARP6Q9BRS8 491 aaKnown RBP10.5□□□□□ -0.73
MCF2L2-203ENST00000447025 WRNQ14191 1432 aaPredicted RBP eCLIP10.5□□□□□ -0.73
MCF2L2-203ENST00000447025 SYNJ1O43426 1573 aa10.5□□□□□ -0.73
MCF2L2-203ENST00000447025 CCDC173Q0VFZ6 552 aa10.5□□□□□ -0.73
MCF2L2-203ENST00000447025 BECN1Q14457 450 aa10.5□□□□□ -0.73
MCF2L2-203ENST00000447025 MFSD4BQ5TF39 518 aa10.5□□□□□ -0.73
MCF2L2-203ENST00000447025 SUN2Q9UH99 717 aa10.5□□□□□ -0.73
MCF2L2-203ENST00000447025 JAKMIP3Q5VZ66 844 aa10.49□□□□□ -0.73
MCF2L2-203ENST00000447025 FAM212AQ96EL1 285 aa10.49□□□□□ -0.73
MCF2L2-203ENST00000447025 CAND2O75155 1236 aa10.48□□□□□ -0.73
MCF2L2-203ENST00000447025 MAGEA8P43361 318 aa10.48□□□□□ -0.73
MCF2L2-203ENST00000447025 WDR78Q5VTH9 848 aa10.48□□□□□ -0.73
MCF2L2-203ENST00000447025 DZIP3Q86Y13 1208 aaKnown RBP10.48□□□□□ -0.73
MCF2L2-203ENST00000447025 ZNF232Q9UNY5 417 aa10.48□□□□□ -0.73
MCF2L2-203ENST00000447025 IL16Q14005 1332 aa10.48□□□□□ -0.73
MCF2L2-203ENST00000447025 RIOK3O14730 519 aaKnown RBP10.48□□□□□ -0.73
MCF2L2-203ENST00000447025 KIF4AO95239 1232 aa10.48□□□□□ -0.73
MCF2L2-203ENST00000447025 ATP6V1AP38606 617 aa10.48□□□□□ -0.73
MCF2L2-203ENST00000447025 AMOTQ4VCS5 1084 aa10.48□□□□□ -0.73
MCF2L2-203ENST00000447025 FANCD2Q9BXW9 1451 aa10.48□□□□□ -0.73
MCF2L2-203ENST00000447025 CCP110O43303 1012 aa10.47□□□□□ -0.73
MCF2L2-203ENST00000447025 HSPA5P11021 654 aaKnown RBP10.47□□□□□ -0.73
MCF2L2-203ENST00000447025 CASQ1P31415 396 aa10.47□□□□□ -0.73
MCF2L2-203ENST00000447025 HMGN5P82970 282 aaKnown RBP10.47□□□□□ -0.73
MCF2L2-203ENST00000447025 ZNF396Q96N95 335 aaPredicted RBP10.47□□□□□ -0.73
MCF2L2-203ENST00000447025 STK24Q9Y6E0 443 aa10.47□□□□□ -0.73
MCF2L2-203ENST00000447025 APBB1O00213 710 aa10.47□□□□□ -0.73
MCF2L2-203ENST00000447025 FAM200BP0CF97 657 aa10.47□□□□□ -0.73
MCF2L2-203ENST00000447025 SETSIPP0DME0 302 aa10.47□□□□□ -0.73
MCF2L2-203ENST00000447025 RAD51AP2Q09MP3 1159 aa10.47□□□□□ -0.73
MCF2L2-203ENST00000447025 TERF2Q15554 542 aa10.47□□□□□ -0.73
MCF2L2-203ENST00000447025 NEUROD2Q15784 382 aa10.47□□□□□ -0.73
MCF2L2-203ENST00000447025 CYB5RLQ6IPT4 315 aa10.47□□□□□ -0.73
MCF2L2-203ENST00000447025 MICALL1Q8N3F8 863 aa10.47□□□□□ -0.73
MCF2L2-203ENST00000447025 TOMM22Q9NS69 142 aa10.47□□□□□ -0.73
MCF2L2-203ENST00000447025 CHCHD3Q9NX63 227 aaKnown RBP10.47□□□□□ -0.73
MCF2L2-203ENST00000447025 CWC25Q9NXE8 425 aaPredicted RBP10.47□□□□□ -0.73
MCF2L2-203ENST00000447025 JRKLQ9Y4A0 524 aa10.47□□□□□ -0.73
MCF2L2-203ENST00000447025 PPFIA2O75334 1257 aa10.46□□□□□ -0.73
MCF2L2-203ENST00000447025 PNMA2Q9UL42 364 aa10.46□□□□□ -0.73
MCF2L2-203ENST00000447025 RUSC2Q8N2Y8 1516 aa10.46□□□□□ -0.74
MCF2L2-203ENST00000447025 SPDYE4A6NLX3 237 aa10.46□□□□□ -0.74
MCF2L2-203ENST00000447025 TMX1Q9H3N1 280 aa10.46□□□□□ -0.74
MCF2L2-203ENST00000447025 ARHGEF10LQ9HCE6 1279 aa10.46□□□□□ -0.74
MCF2L2-203ENST00000447025 SLC4A3P48751 1232 aa10.45□□□□□ -0.74
MCF2L2-203ENST00000447025 TMX4Q9H1E5 349 aaPredicted RBP10.45□□□□□ -0.74
MCF2L2-203ENST00000447025 IRAK4Q9NWZ3 460 aa10.45□□□□□ -0.74
MCF2L2-203ENST00000447025 CUX1P39880 1505 aa10.45□□□□□ -0.74
MCF2L2-203ENST00000447025 SOGA1O94964 1423 aa10.45□□□□□ -0.74
MCF2L2-203ENST00000447025 ATP2B1P20020 1258 aa10.45□□□□□ -0.74
MCF2L2-203ENST00000447025 HSP90AB2PQ58FF8 381 aa10.45□□□□□ -0.74
MCF2L2-203ENST00000447025 PDCL2Q8N4E4 241 aa10.45□□□□□ -0.74
MCF2L2-203ENST00000447025 OGFOD1Q8N543 542 aa10.45□□□□□ -0.74
MCF2L2-203ENST00000447025 UBA5Q9GZZ9 404 aa10.45□□□□□ -0.74
MCF2L2-203ENST00000447025 ETAA1Q9NY74 926 aa10.45□□□□□ -0.74
MCF2L2-203ENST00000447025 EIF3JO75822 258 aaKnown RBP10.44□□□□□ -0.74
MCF2L2-203ENST00000447025 MCM5P33992 734 aa10.44□□□□□ -0.74
MCF2L2-203ENST00000447025 IRX1P78414 480 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms