RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 WWC1Q8IX03 1113 aa22.94■■□□□ 1.26
SMC6-206ENST00000446852 TCP11L2Q8N4U5 519 aa22.94■■□□□ 1.26
SMC6-206ENST00000446852 U2AF1L5P0DN76 240 aaPredicted RBP22.93■■□□□ 1.26
SMC6-206ENST00000446852 U2AF1Q01081 240 aaKnown RBP eCLIP22.93■■□□□ 1.26
SMC6-206ENST00000446852 EXOC6Q8TAG9 804 aa22.93■■□□□ 1.26
SMC6-206ENST00000446852 TBX22Q9Y458 520 aa22.93■■□□□ 1.26
SMC6-206ENST00000446852 ADAMTSL3P82987 1691 aa22.93■■□□□ 1.26
SMC6-206ENST00000446852 RRP7AQ9Y3A4 280 aaKnown RBP22.93■■□□□ 1.26
SMC6-206ENST00000446852 NKTRP30414 1462 aaKnown RBP22.93■■□□□ 1.26
SMC6-206ENST00000446852 XRN1Q8IZH2 1706 aaKnown RBP22.92■■□□□ 1.26
SMC6-206ENST00000446852 PNPLA6Q8IY17 1366 aa22.92■■□□□ 1.26
SMC6-206ENST00000446852 E9PSI1 815 aa22.92■■□□□ 1.26
SMC6-206ENST00000446852 CCDC136Q96JN2 1154 aa22.92■■□□□ 1.26
SMC6-206ENST00000446852 NEUROD2Q15784 382 aa22.91■■□□□ 1.26
SMC6-206ENST00000446852 PHF23Q9BUL5 403 aaPredicted RBP22.91■■□□□ 1.26
SMC6-206ENST00000446852 AMOTL2Q9Y2J4 779 aa22.91■■□□□ 1.26
SMC6-206ENST00000446852 PTCH1Q13635 1447 aa22.91■■□□□ 1.26
SMC6-206ENST00000446852 NRKQ7Z2Y5 1582 aa22.91■■□□□ 1.26
SMC6-206ENST00000446852 ZNF142P52746 1687 aaPredicted RBP22.9■■□□□ 1.26
SMC6-206ENST00000446852 NME9Q86XW9 330 aa22.9■■□□□ 1.26
SMC6-206ENST00000446852 FBLN1P23142 703 aa22.89■■□□□ 1.26
SMC6-206ENST00000446852 U2SURPO15042 1029 aaKnown RBP22.88■■□□□ 1.25
SMC6-206ENST00000446852 ZRANB1Q9UGI0 708 aa22.87■■□□□ 1.25
SMC6-206ENST00000446852 POLKQ9UBT6 870 aa22.87■■□□□ 1.25
SMC6-206ENST00000446852 RGPD8O14715 1765 aaPredicted RBP22.86■■□□□ 1.25
SMC6-206ENST00000446852 PLEKHF1Q96S99 279 aa22.85■■□□□ 1.25
SMC6-206ENST00000446852 NUTM2FA1L443 756 aa22.85■■□□□ 1.25
SMC6-206ENST00000446852 DIAPH1O60610 1272 aaKnown RBP22.85■■□□□ 1.25
SMC6-206ENST00000446852 CCDC27Q2M243 656 aa22.85■■□□□ 1.25
SMC6-206ENST00000446852 C20orf194Q5TEA3 1177 aa22.84■■□□□ 1.25
SMC6-206ENST00000446852 ZNF692Q9BU19 519 aaPredicted RBP22.83■■□□□ 1.25
SMC6-206ENST00000446852 CRBNQ96SW2 442 aa22.82■■□□□ 1.24
SMC6-206ENST00000446852 DNAJC5Q9H3Z4 198 aa22.82■■□□□ 1.24
SMC6-206ENST00000446852 LRRC7Q96NW7 1537 aa22.82■■□□□ 1.24
SMC6-206ENST00000446852 NCBP3Q53F19 620 aaKnown RBP22.82■■□□□ 1.24
SMC6-206ENST00000446852 SETD1BQ9UPS6 1966 aaKnown RBP22.81■■□□□ 1.24
SMC6-206ENST00000446852 ACEP12821 1306 aa22.81■■□□□ 1.24
SMC6-206ENST00000446852 PPM1GO15355 546 aaPredicted RBP22.81■■□□□ 1.24
SMC6-206ENST00000446852 WDR63Q8IWG1 891 aa22.81■■□□□ 1.24
SMC6-206ENST00000446852 PLEKHG3A1L390 1219 aa22.81■■□□□ 1.24
SMC6-206ENST00000446852 EMILIN1Q9Y6C2 1016 aa22.81■■□□□ 1.24
SMC6-206ENST00000446852 AATKQ6ZMQ8 1374 aa22.8■■□□□ 1.24
SMC6-206ENST00000446852 CDK12Q9NYV4 1490 aaPredicted RBP22.8■■□□□ 1.24
SMC6-206ENST00000446852 COG3Q96JB2 828 aa22.8■■□□□ 1.24
SMC6-206ENST00000446852 CHD2O14647 1828 aaKnown RBP22.79■■□□□ 1.24
SMC6-206ENST00000446852 USP6P35125 1406 aa22.79■■□□□ 1.24
SMC6-206ENST00000446852 RBM19Q9Y4C8 960 aaKnown RBP22.79■■□□□ 1.24
SMC6-206ENST00000446852 NALCNQ8IZF0 1738 aa22.78■■□□□ 1.24
SMC6-206ENST00000446852 PIK3R4Q99570 1358 aa22.78■■□□□ 1.24
SMC6-206ENST00000446852 KCNA6P17658 529 aa22.77■■□□□ 1.24
SMC6-206ENST00000446852 TTC21BQ7Z4L5 1316 aa22.77■■□□□ 1.24
SMC6-206ENST00000446852 BCAR3O75815 825 aa22.77■■□□□ 1.24
SMC6-206ENST00000446852 TMPOP42166 694 aaKnown RBP22.76■■□□□ 1.23
SMC6-206ENST00000446852 MAPK8IP3Q9UPT6 1336 aa22.76■■□□□ 1.23
SMC6-206ENST00000446852 OVOS2A0A0J9YW53 1432 aa22.75■■□□□ 1.23
SMC6-206ENST00000446852 OVOS2Q6IE36 1432 aa22.75■■□□□ 1.23
SMC6-206ENST00000446852 FMN2Q9NZ56 1722 aa22.75■■□□□ 1.23
SMC6-206ENST00000446852 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.75■■□□□ 1.23
SMC6-206ENST00000446852 SSH2Q76I76 1423 aa22.74■■□□□ 1.23
SMC6-206ENST00000446852 RRS1Q15050 365 aaKnown RBP22.74■■□□□ 1.23
SMC6-206ENST00000446852 TRIM35Q9UPQ4 493 aa22.74■■□□□ 1.23
SMC6-206ENST00000446852 ANKLE2Q86XL3 938 aa22.73■■□□□ 1.23
SMC6-206ENST00000446852 RSPH6AQ9H0K4 717 aa22.73■■□□□ 1.23
SMC6-206ENST00000446852 FCHSD2O94868 740 aa22.72■■□□□ 1.23
SMC6-206ENST00000446852 IL13P35225 146 aa22.71■■□□□ 1.23
SMC6-206ENST00000446852 PMFBP1Q8TBY8 1022 aa22.71■■□□□ 1.23
SMC6-206ENST00000446852 PRKAR2BP31323 418 aa22.7■■□□□ 1.22
SMC6-206ENST00000446852 PNNQ9H307 717 aaKnown RBP22.7■■□□□ 1.22
SMC6-206ENST00000446852 MYH16Q9H6N6 1097 aa22.69■■□□□ 1.22
SMC6-206ENST00000446852 PEAK1Q9H792 1746 aa22.69■■□□□ 1.22
SMC6-206ENST00000446852 ANKARQ7Z5J8 1434 aa22.68■■□□□ 1.22
SMC6-206ENST00000446852 HMOX1P09601 288 aa22.68■■□□□ 1.22
SMC6-206ENST00000446852 RIPK4P57078 832 aa22.68■■□□□ 1.22
SMC6-206ENST00000446852 PIK3C2AO00443 1686 aa22.68■■□□□ 1.22
SMC6-206ENST00000446852 DLG5Q8TDM6 1919 aa22.66■■□□□ 1.22
SMC6-206ENST00000446852 RARSP54136 660 aaKnown RBP22.66■■□□□ 1.22
SMC6-206ENST00000446852 FANCIQ9NVI1 1328 aa22.66■■□□□ 1.22
SMC6-206ENST00000446852 USP31Q70CQ4 1352 aa22.65■■□□□ 1.22
SMC6-206ENST00000446852 TSR2Q969E8 191 aaKnown RBP22.65■■□□□ 1.22
SMC6-206ENST00000446852 PHACTR3Q96KR7 559 aa22.65■■□□□ 1.22
SMC6-206ENST00000446852 TTC21AQ8NDW8 1320 aa22.64■■□□□ 1.22
SMC6-206ENST00000446852 NGDNQ8NEJ9 315 aaKnown RBP22.64■■□□□ 1.21
SMC6-206ENST00000446852 IL16Q14005 1332 aa22.63■■□□□ 1.21
SMC6-206ENST00000446852 MARF1Q9Y4F3 1742 aaKnown RBP22.63■■□□□ 1.21
SMC6-206ENST00000446852 NPHP4O75161 1426 aaPredicted RBP22.61■■□□□ 1.21
SMC6-206ENST00000446852 RGPD1P0DJD0 1748 aa22.61■■□□□ 1.21
SMC6-206ENST00000446852 PDE3AQ14432 1141 aa22.6■■□□□ 1.21
SMC6-206ENST00000446852 NEFMP07197 916 aa22.59■■□□□ 1.21
SMC6-206ENST00000446852 NFE2L2Q16236 605 aa22.59■■□□□ 1.21
SMC6-206ENST00000446852 RBM33Q96EV2 1170 aaKnown RBP22.59■■□□□ 1.21
SMC6-206ENST00000446852 BCL2L13Q9BXK5 485 aa22.59■■□□□ 1.21
SMC6-206ENST00000446852 EIF4A2Q14240 407 aaKnown RBP22.59■■□□□ 1.21
SMC6-206ENST00000446852 KDM2BQ8NHM5 1336 aa22.58■■□□□ 1.21
SMC6-206ENST00000446852 FRAT1Q92837 279 aaPredicted RBP22.58■■□□□ 1.21
SMC6-206ENST00000446852 USP54Q70EL1 1684 aa22.58■■□□□ 1.21
SMC6-206ENST00000446852 CANXP27824 592 aaKnown RBP22.58■■□□□ 1.21
SMC6-206ENST00000446852 EXOSC9Q06265 439 aaKnown RBP22.58■■□□□ 1.21
SMC6-206ENST00000446852 SOX12O15370 315 aa22.57■■□□□ 1.2
SMC6-206ENST00000446852 PANK1Q8TE04 598 aa22.57■■□□□ 1.2
SMC6-206ENST00000446852 ADGRL3Q9HAR2 1447 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms