RNA–Protein interactions for RNA: ENST00000446764.5

GARNL3-209, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-209ENST00000446764 SLC24A1O60721 1099 aa29.34■■■□□ 2.29
GARNL3-209ENST00000446764 FNBP4Q8N3X1 1017 aaPredicted RBP29.34■■■□□ 2.29
GARNL3-209ENST00000446764 PUS7Q96PZ0 661 aaKnown RBP29.33■■■□□ 2.29
GARNL3-209ENST00000446764 ALS2Q96Q42 1657 aa29.32■■■□□ 2.28
GARNL3-209ENST00000446764 USP6P35125 1406 aa29.31■■■□□ 2.28
GARNL3-209ENST00000446764 BRD4O60885 1362 aaPredicted RBP29.3■■■□□ 2.28
GARNL3-209ENST00000446764 ZNF692Q9BU19 519 aaPredicted RBP29.3■■■□□ 2.28
GARNL3-209ENST00000446764 USP21Q9UK80 565 aa29.3■■■□□ 2.28
GARNL3-209ENST00000446764 NUTM2GQ5VZR2 741 aa29.29■■■□□ 2.28
GARNL3-209ENST00000446764 ABTB2Q8N961 1025 aa29.29■■■□□ 2.28
GARNL3-209ENST00000446764 QTRT2Q9H974 415 aaKnown RBP29.28■■■□□ 2.28
GARNL3-209ENST00000446764 TMC1Q8TDI8 760 aa29.27■■■□□ 2.28
GARNL3-209ENST00000446764 SSH2Q76I76 1423 aa29.27■■■□□ 2.28
GARNL3-209ENST00000446764 TMF1P82094 1093 aa29.26■■■□□ 2.27
GARNL3-209ENST00000446764 SLC12A5Q9H2X9 1139 aa29.26■■■□□ 2.27
GARNL3-209ENST00000446764 CPSF1Q10570 1443 aaKnown RBP29.26■■■□□ 2.27
GARNL3-209ENST00000446764 SOCS7O14512 581 aa29.24■■■□□ 2.27
GARNL3-209ENST00000446764 RXRBP28702 533 aa29.24■■■□□ 2.27
GARNL3-209ENST00000446764 BCL9LQ86UU0 1499 aa29.23■■■□□ 2.27
GARNL3-209ENST00000446764 FAM83GA6ND36 823 aa29.23■■■□□ 2.27
GARNL3-209ENST00000446764 TRPC5Q9UL62 973 aaPredicted RBP29.22■■■□□ 2.27
GARNL3-209ENST00000446764 TTC21BQ7Z4L5 1316 aa29.21■■■□□ 2.27
GARNL3-209ENST00000446764 SLIT2O94813 1529 aa29.21■■■□□ 2.27
GARNL3-209ENST00000446764 NLRP13Q86W25 1043 aa29.21■■■□□ 2.27
GARNL3-209ENST00000446764 KTN1Q86UP2 1357 aaKnown RBP29.21■■■□□ 2.27
GARNL3-209ENST00000446764 CD163L1Q9NR16 1453 aa29.2■■■□□ 2.26
GARNL3-209ENST00000446764 ABCA3Q99758 1704 aa29.2■■■□□ 2.26
GARNL3-209ENST00000446764 RBM6P78332 1123 aaKnown RBP29.19■■■□□ 2.26
GARNL3-209ENST00000446764 UNC5CLQ8IV45 518 aa29.19■■■□□ 2.26
GARNL3-209ENST00000446764 USP19O94966 1318 aa29.19■■■□□ 2.26
GARNL3-209ENST00000446764 NLRP6P59044 892 aa29.18■■■□□ 2.26
GARNL3-209ENST00000446764 EIF4G2P78344 907 aaKnown RBP eCLIP29.18■■■□□ 2.26
GARNL3-209ENST00000446764 HDGFL2Q7Z4V5 671 aaPredicted RBP29.18■■■□□ 2.26
GARNL3-209ENST00000446764 ATRNO75882 1429 aa29.18■■■□□ 2.26
GARNL3-209ENST00000446764 MARF1Q9Y4F3 1742 aaKnown RBP29.17■■■□□ 2.26
GARNL3-209ENST00000446764 TTC21AQ8NDW8 1320 aa29.17■■■□□ 2.26
GARNL3-209ENST00000446764 NINLQ9Y2I6 1382 aa29.16■■■□□ 2.26
GARNL3-209ENST00000446764 TERF2IPQ9NYB0 399 aa29.16■■■□□ 2.26
GARNL3-209ENST00000446764 HSPA5P11021 654 aaKnown RBP29.15■■■□□ 2.26
GARNL3-209ENST00000446764 CDCA8Q53HL2 280 aa29.15■■■□□ 2.26
GARNL3-209ENST00000446764 CRYBG1Q9Y4K1 1723 aa29.14■■■□□ 2.26
GARNL3-209ENST00000446764 GCP02774 474 aa29.14■■■□□ 2.26
GARNL3-209ENST00000446764 ZC3H6P61129 1189 aaKnown RBP29.14■■■□□ 2.26
GARNL3-209ENST00000446764 PRDM11Q9NQV5 511 aa29.14■■■□□ 2.26
GARNL3-209ENST00000446764 A0A1W2PP64 1363 aa29.13■■■□□ 2.25
GARNL3-209ENST00000446764 KIAA0232Q92628 1395 aa29.13■■■□□ 2.25
GARNL3-209ENST00000446764 AKAP12Q02952 1782 aa29.11■■■□□ 2.25
GARNL3-209ENST00000446764 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.11■■■□□ 2.25
GARNL3-209ENST00000446764 BTG4Q9NY30 223 aa29.11■■■□□ 2.25
GARNL3-209ENST00000446764 CHRNA2Q15822 529 aa29.1■■■□□ 2.25
GARNL3-209ENST00000446764 GJD4Q96KN9 370 aaPredicted RBP29.1■■■□□ 2.25
GARNL3-209ENST00000446764 CDK12Q9NYV4 1490 aaPredicted RBP29.1■■■□□ 2.25
GARNL3-209ENST00000446764 PHRF1Q9P1Y6 1649 aaKnown RBP29.09■■■□□ 2.25
GARNL3-209ENST00000446764 VPS72Q15906 364 aa29.08■■■□□ 2.25
GARNL3-209ENST00000446764 EDC4Q6P2E9 1401 aaKnown RBP29.08■■■□□ 2.25
GARNL3-209ENST00000446764 NRKQ7Z2Y5 1582 aa29.08■■■□□ 2.25
GARNL3-209ENST00000446764 PIK3C2AO00443 1686 aa29.07■■■□□ 2.24
GARNL3-209ENST00000446764 CPDO75976 1380 aa29.07■■■□□ 2.24
GARNL3-209ENST00000446764 NME9Q86XW9 330 aa29.06■■■□□ 2.24
GARNL3-209ENST00000446764 ZRANB1Q9UGI0 708 aa29.06■■■□□ 2.24
GARNL3-209ENST00000446764 MON2Q7Z3U7 1717 aa29.06■■■□□ 2.24
GARNL3-209ENST00000446764 SLIT3O75094 1523 aa29.05■■■□□ 2.24
GARNL3-209ENST00000446764 RGS12O14924 1447 aa29.05■■■□□ 2.24
GARNL3-209ENST00000446764 ANKRD36BQ8N2N9 1353 aa29.05■■■□□ 2.24
GARNL3-209ENST00000446764 COL14A1Q05707 1796 aaKnown RBP29.05■■■□□ 2.24
GARNL3-209ENST00000446764 USP31Q70CQ4 1352 aa29.04■■■□□ 2.24
GARNL3-209ENST00000446764 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.03■■■□□ 2.24
GARNL3-209ENST00000446764 PLCH1Q4KWH8 1693 aa29.03■■■□□ 2.24
GARNL3-209ENST00000446764 KCNH5Q8NCM2 988 aa29.02■■■□□ 2.24
GARNL3-209ENST00000446764 CCDC9Q9Y3X0 531 aaKnown RBP29.02■■■□□ 2.24
GARNL3-209ENST00000446764 NWD2Q9ULI1 1742 aa29.01■■■□□ 2.23
GARNL3-209ENST00000446764 SOX12O15370 315 aa28.99■■■□□ 2.23
GARNL3-209ENST00000446764 ZBTB7CA1YPR0 619 aa28.98■■■□□ 2.23
GARNL3-209ENST00000446764 POLR3GLQ9BT43 218 aa28.97■■■□□ 2.23
GARNL3-209ENST00000446764 GLI3P10071 1580 aa28.96■■■□□ 2.23
GARNL3-209ENST00000446764 ARHGEF25Q86VW2 580 aa28.96■■■□□ 2.23
GARNL3-209ENST00000446764 STRN4Q9NRL3 753 aa28.96■■■□□ 2.23
GARNL3-209ENST00000446764 NRAPQ86VF7 1730 aa28.96■■■□□ 2.23
GARNL3-209ENST00000446764 AATKQ6ZMQ8 1374 aa28.95■■■□□ 2.22
GARNL3-209ENST00000446764 CAMTA1Q9Y6Y1 1673 aa28.94■■■□□ 2.22
GARNL3-209ENST00000446764 C11orf95C9JLR9 678 aaPredicted RBP28.94■■■□□ 2.22
GARNL3-209ENST00000446764 EVA1CP58658 441 aa28.94■■■□□ 2.22
GARNL3-209ENST00000446764 SPATA31A5Q5VU36 1347 aa28.94■■■□□ 2.22
GARNL3-209ENST00000446764 SPATA31A7Q8IWB4 1347 aa28.94■■■□□ 2.22
GARNL3-209ENST00000446764 ONECUT3O60422 494 aaPredicted RBP28.93■■■□□ 2.22
GARNL3-209ENST00000446764 CARD14Q9BXL6 1004 aa28.92■■■□□ 2.22
GARNL3-209ENST00000446764 OVOS2A0A0J9YW53 1432 aa28.92■■■□□ 2.22
GARNL3-209ENST00000446764 OVOS2Q6IE36 1432 aa28.92■■■□□ 2.22
GARNL3-209ENST00000446764 NFAT5O94916 1531 aa28.9■■■□□ 2.22
GARNL3-209ENST00000446764 LMO7Q8WWI1 1683 aa28.9■■■□□ 2.22
GARNL3-209ENST00000446764 FYB1O15117 783 aa28.89■■■□□ 2.22
GARNL3-209ENST00000446764 LARP1Q6PKG0 1096 aaKnown RBP28.89■■■□□ 2.22
GARNL3-209ENST00000446764 SEPT12Q8IYM1 358 aa28.89■■■□□ 2.22
GARNL3-209ENST00000446764 COG3Q96JB2 828 aa28.89■■■□□ 2.22
GARNL3-209ENST00000446764 AXIN2Q9Y2T1 843 aa28.89■■■□□ 2.22
GARNL3-209ENST00000446764 SPATA31A1Q5TZJ5 1347 aa28.89■■■□□ 2.21
GARNL3-209ENST00000446764 FAM98CQ17RN3 349 aaKnown RBP28.88■■■□□ 2.21
GARNL3-209ENST00000446764 MYOM1P52179 1685 aa28.87■■■□□ 2.21
GARNL3-209ENST00000446764 USP54Q70EL1 1684 aa28.87■■■□□ 2.21
GARNL3-209ENST00000446764 COL5A2P05997 1499 aaPredicted RBP28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms