RNA–Protein interactions for RNA: ENST00000446668.5

MANF-201, Transcript of mesencephalic astrocyte derived neurotrophic factor, humanhuman

TSL 3

Gene MANF, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MANF-201ENST00000446668 POLR3AO14802 1390 aaPredicted RBP29.71■■■□□ 2.35
MANF-201ENST00000446668 ATAD2Q6PL18 1390 aa29.69■■■□□ 2.34
MANF-201ENST00000446668 PLEKHG3A1L390 1219 aa29.69■■■□□ 2.34
MANF-201ENST00000446668 UPF1Q92900 1129 aaKnown RBP eCLIP29.69■■■□□ 2.34
MANF-201ENST00000446668 EVC2Q86UK5 1308 aa29.69■■■□□ 2.34
MANF-201ENST00000446668 PLCH1Q4KWH8 1693 aa29.68■■■□□ 2.34
MANF-201ENST00000446668 ACEP12821 1306 aa29.68■■■□□ 2.34
MANF-201ENST00000446668 PPIP5K1Q6PFW1 1433 aa29.66■■■□□ 2.34
MANF-201ENST00000446668 NBPF8Q3BBV2 869 aa29.65■■■□□ 2.34
MANF-201ENST00000446668 BRD4O60885 1362 aaPredicted RBP29.64■■■□□ 2.34
MANF-201ENST00000446668 COL14A1Q05707 1796 aaKnown RBP29.63■■■□□ 2.33
MANF-201ENST00000446668 CABP2Q9NPB3 220 aa29.63■■■□□ 2.33
MANF-201ENST00000446668 CCDC9Q9Y3X0 531 aaKnown RBP29.63■■■□□ 2.33
MANF-201ENST00000446668 RALGAPBQ86X10 1494 aa29.62■■■□□ 2.33
MANF-201ENST00000446668 VPS72Q15906 364 aa29.62■■■□□ 2.33
MANF-201ENST00000446668 CARD11Q9BXL7 1154 aa29.59■■■□□ 2.33
MANF-201ENST00000446668 CRYBG1Q9Y4K1 1723 aa29.59■■■□□ 2.33
MANF-201ENST00000446668 FAM83GA6ND36 823 aa29.58■■■□□ 2.33
MANF-201ENST00000446668 PRDM11Q9NQV5 511 aa29.58■■■□□ 2.33
MANF-201ENST00000446668 ABTB2Q8N961 1025 aa29.57■■■□□ 2.32
MANF-201ENST00000446668 GLI3P10071 1580 aa29.56■■■□□ 2.32
MANF-201ENST00000446668 BTG4Q9NY30 223 aa29.56■■■□□ 2.32
MANF-201ENST00000446668 PHRF1Q9P1Y6 1649 aaKnown RBP29.55■■■□□ 2.32
MANF-201ENST00000446668 SBNO2Q9Y2G9 1366 aa29.54■■■□□ 2.32
MANF-201ENST00000446668 NLRP13Q86W25 1043 aa29.53■■■□□ 2.32
MANF-201ENST00000446668 CABP1Q9NZU7 370 aa29.53■■■□□ 2.32
MANF-201ENST00000446668 NRAPQ86VF7 1730 aa29.52■■■□□ 2.32
MANF-201ENST00000446668 CCDC125Q86Z20 511 aa29.5■■■□□ 2.31
MANF-201ENST00000446668 ZNF692Q9BU19 519 aaPredicted RBP29.5■■■□□ 2.31
MANF-201ENST00000446668 USP6P35125 1406 aa29.5■■■□□ 2.31
MANF-201ENST00000446668 NUTM2GQ5VZR2 741 aa29.49■■■□□ 2.31
MANF-201ENST00000446668 KIAA0232Q92628 1395 aa29.49■■■□□ 2.31
MANF-201ENST00000446668 A0A0G2JS52 829 aa29.48■■■□□ 2.31
MANF-201ENST00000446668 MYT1Q01538 1121 aa29.48■■■□□ 2.31
MANF-201ENST00000446668 SEPT12Q8IYM1 358 aa29.47■■■□□ 2.31
MANF-201ENST00000446668 SLC24A1O60721 1099 aa29.46■■■□□ 2.31
MANF-201ENST00000446668 USP19O94966 1318 aa29.45■■■□□ 2.31
MANF-201ENST00000446668 NRKQ7Z2Y5 1582 aa29.45■■■□□ 2.31
MANF-201ENST00000446668 ONECUT3O60422 494 aaPredicted RBP29.44■■■□□ 2.3
MANF-201ENST00000446668 ZC3H6P61129 1189 aaKnown RBP29.44■■■□□ 2.3
MANF-201ENST00000446668 CPDO75976 1380 aa29.43■■■□□ 2.3
MANF-201ENST00000446668 SPATA31A5Q5VU36 1347 aa29.41■■■□□ 2.3
MANF-201ENST00000446668 SPATA31A7Q8IWB4 1347 aa29.41■■■□□ 2.3
MANF-201ENST00000446668 EVA1CP58658 441 aa29.4■■■□□ 2.3
MANF-201ENST00000446668 NLRP6P59044 892 aa29.4■■■□□ 2.3
MANF-201ENST00000446668 AKAP12Q02952 1782 aa29.39■■■□□ 2.3
MANF-201ENST00000446668 GCP02774 474 aa29.39■■■□□ 2.3
MANF-201ENST00000446668 CHRNA2Q15822 529 aa29.39■■■□□ 2.3
MANF-201ENST00000446668 FAM98CQ17RN3 349 aaKnown RBP29.39■■■□□ 2.3
MANF-201ENST00000446668 KRT27Q7Z3Y8 459 aa29.39■■■□□ 2.3
MANF-201ENST00000446668 TTC21AQ8NDW8 1320 aa29.39■■■□□ 2.3
MANF-201ENST00000446668 CLSPNQ9HAW4 1339 aa29.39■■■□□ 2.3
MANF-201ENST00000446668 BRWD3Q6RI45 1802 aa29.38■■■□□ 2.29
MANF-201ENST00000446668 SF3B2Q13435 895 aaKnown RBP29.38■■■□□ 2.29
MANF-201ENST00000446668 STRN4Q9NRL3 753 aa29.38■■■□□ 2.29
MANF-201ENST00000446668 KTN1Q86UP2 1357 aaKnown RBP29.36■■■□□ 2.29
MANF-201ENST00000446668 BLMP54132 1417 aaPredicted RBP29.36■■■□□ 2.29
MANF-201ENST00000446668 PUS7Q96PZ0 661 aaKnown RBP29.35■■■□□ 2.29
MANF-201ENST00000446668 TIMELESSQ9UNS1 1208 aa29.35■■■□□ 2.29
MANF-201ENST00000446668 SSH2Q76I76 1423 aa29.35■■■□□ 2.29
MANF-201ENST00000446668 EP400Q96L91 3159 aa29.35■■■□□ 2.29
MANF-201ENST00000446668 HDGFL2Q7Z4V5 671 aaPredicted RBP29.33■■■□□ 2.29
MANF-201ENST00000446668 KCNH5Q8NCM2 988 aa29.33■■■□□ 2.29
MANF-201ENST00000446668 SPATA31A1Q5TZJ5 1347 aa29.33■■■□□ 2.29
MANF-201ENST00000446668 TTC21BQ7Z4L5 1316 aa29.33■■■□□ 2.29
MANF-201ENST00000446668 CPSF1Q10570 1443 aaKnown RBP29.33■■■□□ 2.29
MANF-201ENST00000446668 SLIT3O75094 1523 aa29.33■■■□□ 2.29
MANF-201ENST00000446668 PIK3C2AO00443 1686 aa29.33■■■□□ 2.29
MANF-201ENST00000446668 TMC1Q8TDI8 760 aa29.31■■■□□ 2.28
MANF-201ENST00000446668 NINLQ9Y2I6 1382 aa29.3■■■□□ 2.28
MANF-201ENST00000446668 TERF2IPQ9NYB0 399 aa29.3■■■□□ 2.28
MANF-201ENST00000446668 MON2Q7Z3U7 1717 aa29.3■■■□□ 2.28
MANF-201ENST00000446668 LMO7Q8WWI1 1683 aa29.3■■■□□ 2.28
MANF-201ENST00000446668 THSD7AQ9UPZ6 1657 aa29.28■■■□□ 2.28
MANF-201ENST00000446668 ZBTB7CA1YPR0 619 aa29.28■■■□□ 2.28
MANF-201ENST00000446668 PCGF6Q9BYE7 350 aa29.28■■■□□ 2.28
MANF-201ENST00000446668 CAMTA1Q9Y6Y1 1673 aa29.27■■■□□ 2.28
MANF-201ENST00000446668 AATKQ6ZMQ8 1374 aa29.26■■■□□ 2.28
MANF-201ENST00000446668 THRAP3Q9Y2W1 955 aaKnown RBP29.26■■■□□ 2.27
MANF-201ENST00000446668 ST20-MTHFSA0A0A6YYL1 179 aa29.25■■■□□ 2.27
MANF-201ENST00000446668 BARGINQ6ZT62 677 aa29.25■■■□□ 2.27
MANF-201ENST00000446668 USP35Q9P2H5 1018 aa29.25■■■□□ 2.27
MANF-201ENST00000446668 TCP11L2Q8N4U5 519 aa29.24■■■□□ 2.27
MANF-201ENST00000446668 COL5A2P05997 1499 aaPredicted RBP29.23■■■□□ 2.27
MANF-201ENST00000446668 ZRANB1Q9UGI0 708 aa29.22■■■□□ 2.27
MANF-201ENST00000446668 EDC4Q6P2E9 1401 aaKnown RBP29.21■■■□□ 2.27
MANF-201ENST00000446668 LARP1Q6PKG0 1096 aaKnown RBP29.21■■■□□ 2.27
MANF-201ENST00000446668 USP47Q96K76 1375 aa29.21■■■□□ 2.27
MANF-201ENST00000446668 CRB1P82279 1406 aa29.2■■■□□ 2.27
MANF-201ENST00000446668 TMF1P82094 1093 aa29.2■■■□□ 2.26
MANF-201ENST00000446668 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.2■■■□□ 2.26
MANF-201ENST00000446668 CDCA8Q53HL2 280 aa29.19■■■□□ 2.26
MANF-201ENST00000446668 TESK2Q96S53 571 aa29.19■■■□□ 2.26
MANF-201ENST00000446668 BAG6P46379 1132 aa29.18■■■□□ 2.26
MANF-201ENST00000446668 PDE3BQ13370 1112 aa29.18■■■□□ 2.26
MANF-201ENST00000446668 SLC12A5Q9H2X9 1139 aa29.18■■■□□ 2.26
MANF-201ENST00000446668 ABCC6O95255 1503 aa29.18■■■□□ 2.26
MANF-201ENST00000446668 CD163L1Q9NR16 1453 aa29.17■■■□□ 2.26
MANF-201ENST00000446668 USP31Q70CQ4 1352 aa29.17■■■□□ 2.26
MANF-201ENST00000446668 RGPD1P0DJD0 1748 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms