RNA–Protein interactions for RNA: ENST00000446204.6

VPS8-210, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 4,721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-210ENST00000446204 PRPF40AO75400 957 aaKnown RBP9.74□□□□□ -0.85
VPS8-210ENST00000446204 ZKSCAN1P17029 563 aaPredicted RBP9.74□□□□□ -0.85
VPS8-210ENST00000446204 KIF21AQ7Z4S6 1674 aa9.74□□□□□ -0.85
VPS8-210ENST00000446204 TRIM27P14373 513 aa9.74□□□□□ -0.85
VPS8-210ENST00000446204 GNAI3P08754 354 aa9.74□□□□□ -0.85
VPS8-210ENST00000446204 TEFQ10587 303 aa9.74□□□□□ -0.85
VPS8-210ENST00000446204 NFE2L2Q16236 605 aa9.74□□□□□ -0.85
VPS8-210ENST00000446204 FAM13BQ9NYF5 915 aa9.73□□□□□ -0.85
VPS8-210ENST00000446204 SMC3Q9UQE7 1217 aa9.73□□□□□ -0.85
VPS8-210ENST00000446204 KIF3AQ9Y496 699 aa9.73□□□□□ -0.85
VPS8-210ENST00000446204 COL17A1Q9UMD9 1497 aaPredicted RBP9.73□□□□□ -0.85
VPS8-210ENST00000446204 ESPNB1AK53 854 aa9.73□□□□□ -0.85
VPS8-210ENST00000446204 GNL2Q13823 731 aaKnown RBP9.73□□□□□ -0.85
VPS8-210ENST00000446204 C9orf78Q9NZ63 289 aaPredicted RBP9.73□□□□□ -0.85
VPS8-210ENST00000446204 PCDHB15Q9Y5E8 787 aa9.73□□□□□ -0.85
VPS8-210ENST00000446204 HSP90AB4PQ58FF6 505 aa9.73□□□□□ -0.85
VPS8-210ENST00000446204 PIK3C2GO75747 1445 aa9.72□□□□□ -0.85
VPS8-210ENST00000446204 CCDC39Q9UFE4 941 aa9.72□□□□□ -0.85
VPS8-210ENST00000446204 ERC2O15083 957 aa9.72□□□□□ -0.85
VPS8-210ENST00000446204 TPM2P07951 284 aa9.72□□□□□ -0.85
VPS8-210ENST00000446204 IFIT2P09913 472 aaKnown RBP9.72□□□□□ -0.85
VPS8-210ENST00000446204 UBTFL1P0CB47 393 aaPredicted RBP9.72□□□□□ -0.85
VPS8-210ENST00000446204 RNF214Q8ND24 703 aa9.72□□□□□ -0.85
VPS8-210ENST00000446204 CHMP3Q9Y3E7 222 aa9.72□□□□□ -0.85
VPS8-210ENST00000446204 DUOX2Q9NRD8 1548 aa9.72□□□□□ -0.85
VPS8-210ENST00000446204 INSRP06213 1382 aa9.72□□□□□ -0.85
VPS8-210ENST00000446204 SLC4A2P04920 1241 aa9.71□□□□□ -0.85
VPS8-210ENST00000446204 TPM4P67936 248 aa9.71□□□□□ -0.85
VPS8-210ENST00000446204 SULT6B1Q6IMI4 303 aa9.71□□□□□ -0.85
VPS8-210ENST00000446204 C14orf93Q9H972 538 aaKnown RBP9.71□□□□□ -0.85
VPS8-210ENST00000446204 NSD2O96028 1365 aa9.71□□□□□ -0.85
VPS8-210ENST00000446204 EIF2AK4Q9P2K8 1649 aaKnown RBP9.71□□□□□ -0.85
VPS8-210ENST00000446204 H3BQV1 296 aa9.71□□□□□ -0.85
VPS8-210ENST00000446204 GNAI2P04899 355 aa9.71□□□□□ -0.85
VPS8-210ENST00000446204 CSB-PGBD3P0DP91 1061 aa9.71□□□□□ -0.85
VPS8-210ENST00000446204 IFFO2Q5TF58 517 aa9.71□□□□□ -0.85
VPS8-210ENST00000446204 RPAP2Q8IXW5 612 aaPredicted RBP9.71□□□□□ -0.85
VPS8-210ENST00000446204 R3HCC1Q9Y3T6 440 aaKnown RBP9.71□□□□□ -0.85
VPS8-210ENST00000446204 ABCA5Q8WWZ7 1642 aa9.71□□□□□ -0.86
VPS8-210ENST00000446204 DISP1Q96F81 1524 aa9.71□□□□□ -0.86
VPS8-210ENST00000446204 CCDC30Q5VVM6 783 aa9.71□□□□□ -0.86
VPS8-210ENST00000446204 NOS1P29475 1434 aa9.71□□□□□ -0.86
VPS8-210ENST00000446204 SYCP2Q9BX26 1530 aa9.71□□□□□ -0.86
VPS8-210ENST00000446204 C1orf141Q5JVX7 400 aa9.7□□□□□ -0.86
VPS8-210ENST00000446204 KDM2BQ8NHM5 1336 aa9.7□□□□□ -0.86
VPS8-210ENST00000446204 POLR3AO14802 1390 aaPredicted RBP9.7□□□□□ -0.86
VPS8-210ENST00000446204 GORABQ5T7V8 394 aa9.7□□□□□ -0.86
VPS8-210ENST00000446204 FAM184AQ8NB25 1140 aa9.7□□□□□ -0.86
VPS8-210ENST00000446204 GAS2L2Q8NHY3 880 aa9.7□□□□□ -0.86
VPS8-210ENST00000446204 THUMPD2Q9BTF0 503 aaKnown RBP9.7□□□□□ -0.86
VPS8-210ENST00000446204 ZNF692Q9BU19 519 aaPredicted RBP9.7□□□□□ -0.86
VPS8-210ENST00000446204 RTEL1-TNFRSF6BF6WH68 1400 aa9.7□□□□□ -0.86
VPS8-210ENST00000446204 VPS37CA5D8V6 355 aaPredicted RBP9.7□□□□□ -0.86
VPS8-210ENST00000446204 CCT4P50991 539 aaKnown RBP9.7□□□□□ -0.86
VPS8-210ENST00000446204 HDAC1Q13547 482 aaPredicted RBP9.7□□□□□ -0.86
VPS8-210ENST00000446204 CCDC27Q2M243 656 aa9.7□□□□□ -0.86
VPS8-210ENST00000446204 GOLGA6L19H0YKK7 550 aa9.7□□□□□ -0.86
VPS8-210ENST00000446204 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.7□□□□□ -0.86
VPS8-210ENST00000446204 RNF20Q5VTR2 975 aa9.69□□□□□ -0.86
VPS8-210ENST00000446204 CYB5RLQ6IPT4 315 aa9.69□□□□□ -0.86
VPS8-210ENST00000446204 IFT57Q9NWB7 429 aa9.69□□□□□ -0.86
VPS8-210ENST00000446204 ADGRL1O94910 1474 aa9.69□□□□□ -0.86
VPS8-210ENST00000446204 RAPGEF3O95398 923 aa9.69□□□□□ -0.86
VPS8-210ENST00000446204 IL16Q14005 1332 aa9.69□□□□□ -0.86
VPS8-210ENST00000446204 SURF6O75683 361 aaKnown RBP9.69□□□□□ -0.86
VPS8-210ENST00000446204 TXNDC2Q86VQ3 553 aa9.69□□□□□ -0.86
VPS8-210ENST00000446204 A2MP01023 1474 aa9.68□□□□□ -0.86
VPS8-210ENST00000446204 BMP2KLQ5H9B9 411 aa9.68□□□□□ -0.86
VPS8-210ENST00000446204 CNTROBQ8N137 903 aa9.68□□□□□ -0.86
VPS8-210ENST00000446204 TNPO1Q92973 898 aaKnown RBP9.68□□□□□ -0.86
VPS8-210ENST00000446204 TSPY26PQ9H489 355 aa9.68□□□□□ -0.86
VPS8-210ENST00000446204 SPINK5Q9NQ38 1064 aaPredicted RBP9.68□□□□□ -0.86
VPS8-210ENST00000446204 PLCH2O75038 1416 aa9.68□□□□□ -0.86
VPS8-210ENST00000446204 ZMYM4Q5VZL5 1548 aa9.68□□□□□ -0.86
VPS8-210ENST00000446204 KDM6BO15054 1643 aa9.68□□□□□ -0.86
VPS8-210ENST00000446204 NEXNQ0ZGT2 675 aa9.68□□□□□ -0.86
VPS8-210ENST00000446204 SF3A1Q15459 793 aaKnown RBP9.68□□□□□ -0.86
VPS8-210ENST00000446204 BLMP54132 1417 aaPredicted RBP9.68□□□□□ -0.86
VPS8-210ENST00000446204 BECN2A8MW95 431 aa9.68□□□□□ -0.86
VPS8-210ENST00000446204 G3BP1Q13283 466 aaKnown RBP eCLIP9.68□□□□□ -0.86
VPS8-210ENST00000446204 LRRCC1Q9C099 1032 aa9.68□□□□□ -0.86
VPS8-210ENST00000446204 CHMP4CQ96CF2 233 aa9.68□□□□□ -0.86
VPS8-210ENST00000446204 MAP7D2Q96T17 732 aa9.68□□□□□ -0.86
VPS8-210ENST00000446204 RRS1Q15050 365 aaKnown RBP9.67□□□□□ -0.86
VPS8-210ENST00000446204 LETM1O95202 739 aaPredicted RBP9.67□□□□□ -0.86
VPS8-210ENST00000446204 DDX58O95786 925 aaKnown RBP9.67□□□□□ -0.86
VPS8-210ENST00000446204 FAM69CQ0P6D2 419 aa9.67□□□□□ -0.86
VPS8-210ENST00000446204 CARD14Q9BXL6 1004 aa9.67□□□□□ -0.86
VPS8-210ENST00000446204 NPC1L1Q9UHC9 1359 aa9.67□□□□□ -0.86
VPS8-210ENST00000446204 RLBP1P12271 317 aa9.67□□□□□ -0.86
VPS8-210ENST00000446204 CDK11BP21127 795 aaKnown RBP9.67□□□□□ -0.86
VPS8-210ENST00000446204 CLASRPQ8N2M8 674 aaKnown RBP9.67□□□□□ -0.86
VPS8-210ENST00000446204 NLRP6P59044 892 aa9.66□□□□□ -0.86
VPS8-210ENST00000446204 BICD2Q8TD16 824 aa9.66□□□□□ -0.86
VPS8-210ENST00000446204 ZNF330Q9Y3S2 320 aaPredicted RBP9.66□□□□□ -0.86
VPS8-210ENST00000446204 SEC24BO95487 1268 aa9.66□□□□□ -0.86
VPS8-210ENST00000446204 TAF7LQ5H9L4 462 aa9.66□□□□□ -0.86
VPS8-210ENST00000446204 MTERF4Q7Z6M4 381 aaKnown RBP9.66□□□□□ -0.86
VPS8-210ENST00000446204 NUCB1Q02818 461 aa9.65□□□□□ -0.86
VPS8-210ENST00000446204 SRCIN1Q9C0H9 1055 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms