RNA–Protein interactions for RNA: ENST00000445371.1

SDHCP3-201, Transcript of succinate dehydrogenase complex subunit C pseudogene 3, humanhuman

BASIC

Gene SDHCP3, Length 506 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCP3-201ENST00000445371 MED1Q15648 1581 aaPredicted RBP9.5□□□□□ -0.89
SDHCP3-201ENST00000445371 PPP2R1AP30153 589 aa9.5□□□□□ -0.89
SDHCP3-201ENST00000445371 CFAP53Q96M91 514 aa9.5□□□□□ -0.89
SDHCP3-201ENST00000445371 SLAIN2Q9P270 581 aa9.5□□□□□ -0.89
SDHCP3-201ENST00000445371 C1orf167Q5SNV9 1468 aa9.5□□□□□ -0.89
SDHCP3-201ENST00000445371 USP6P35125 1406 aa9.49□□□□□ -0.89
SDHCP3-201ENST00000445371 NALCNQ8IZF0 1738 aa9.49□□□□□ -0.89
SDHCP3-201ENST00000445371 FOXO3O43524 673 aa9.49□□□□□ -0.89
SDHCP3-201ENST00000445371 LMOD2Q6P5Q4 547 aa9.49□□□□□ -0.89
SDHCP3-201ENST00000445371 NME9Q86XW9 330 aa9.49□□□□□ -0.89
SDHCP3-201ENST00000445371 FAM9BQ8IZU0 186 aa9.49□□□□□ -0.89
SDHCP3-201ENST00000445371 WDR43Q15061 677 aaKnown RBP eCLIP9.48□□□□□ -0.89
SDHCP3-201ENST00000445371 KRT28Q7Z3Y7 464 aa9.48□□□□□ -0.89
SDHCP3-201ENST00000445371 ABTB2Q8N961 1025 aa9.48□□□□□ -0.89
SDHCP3-201ENST00000445371 NPHP3Q7Z494 1330 aa9.48□□□□□ -0.89
SDHCP3-201ENST00000445371 FMN2Q9NZ56 1722 aa9.48□□□□□ -0.89
SDHCP3-201ENST00000445371 MST1RQ04912 1400 aa9.48□□□□□ -0.89
SDHCP3-201ENST00000445371 PPM1GO15355 546 aaPredicted RBP9.47□□□□□ -0.89
SDHCP3-201ENST00000445371 NLRP6P59044 892 aa9.47□□□□□ -0.89
SDHCP3-201ENST00000445371 SOX12O15370 315 aa9.46□□□□□ -0.9
SDHCP3-201ENST00000445371 XPCQ01831 940 aaPredicted RBP9.46□□□□□ -0.9
SDHCP3-201ENST00000445371 CCDC184Q52MB2 194 aa9.46□□□□□ -0.9
SDHCP3-201ENST00000445371 USP32Q8NFA0 1604 aa9.45□□□□□ -0.9
SDHCP3-201ENST00000445371 ITSN1Q15811 1721 aa9.45□□□□□ -0.9
SDHCP3-201ENST00000445371 TOM1O60784 492 aa9.45□□□□□ -0.9
SDHCP3-201ENST00000445371 MTHFSP49914 203 aa9.45□□□□□ -0.9
SDHCP3-201ENST00000445371 NUTM2GQ5VZR2 741 aa9.45□□□□□ -0.9
SDHCP3-201ENST00000445371 BRINP3Q76B58 766 aa9.45□□□□□ -0.9
SDHCP3-201ENST00000445371 ZRANB1Q9UGI0 708 aa9.45□□□□□ -0.9
SDHCP3-201ENST00000445371 SCAF1Q9H7N4 1312 aaKnown RBP9.45□□□□□ -0.9
SDHCP3-201ENST00000445371 LTBP4Q8N2S1 1624 aa9.45□□□□□ -0.9
SDHCP3-201ENST00000445371 TOPAZ1Q8N9V7 1692 aa9.45□□□□□ -0.9
SDHCP3-201ENST00000445371 PLEKHG5O94827 1062 aa9.44□□□□□ -0.9
SDHCP3-201ENST00000445371 NUDCQ9Y266 331 aa9.44□□□□□ -0.9
SDHCP3-201ENST00000445371 STRCP1A6NGW2 1772 aa9.43□□□□□ -0.9
SDHCP3-201ENST00000445371 SSH2Q76I76 1423 aa9.43□□□□□ -0.9
SDHCP3-201ENST00000445371 KCNH5Q8NCM2 988 aa9.43□□□□□ -0.9
SDHCP3-201ENST00000445371 PNISRQ8TF01 805 aaKnown RBP9.43□□□□□ -0.9
SDHCP3-201ENST00000445371 USP31Q70CQ4 1352 aa9.42□□□□□ -0.9
SDHCP3-201ENST00000445371 CENPBP07199 599 aaPredicted RBP9.42□□□□□ -0.9
SDHCP3-201ENST00000445371 HAP1P54257 671 aaPredicted RBP9.42□□□□□ -0.9
SDHCP3-201ENST00000445371 DDX17Q92841 729 aaKnown RBP9.42□□□□□ -0.9
SDHCP3-201ENST00000445371 KIF1AQ12756 1690 aa9.42□□□□□ -0.9
SDHCP3-201ENST00000445371 IQSEC2Q5JU85 1478 aa9.41□□□□□ -0.9
SDHCP3-201ENST00000445371 SBNO1A3KN83 1393 aa9.41□□□□□ -0.9
SDHCP3-201ENST00000445371 AATKQ6ZMQ8 1374 aa9.41□□□□□ -0.9
SDHCP3-201ENST00000445371 ZBTB7CA1YPR0 619 aa9.41□□□□□ -0.9
SDHCP3-201ENST00000445371 UBAP1LF5GYI3 381 aa9.41□□□□□ -0.9
SDHCP3-201ENST00000445371 U2SURPO15042 1029 aaKnown RBP9.41□□□□□ -0.9
SDHCP3-201ENST00000445371 DIAPH1O60610 1272 aaKnown RBP9.41□□□□□ -0.9
SDHCP3-201ENST00000445371 AMPHP49418 695 aa9.41□□□□□ -0.9
SDHCP3-201ENST00000445371 PIP4K2BP78356 416 aa9.41□□□□□ -0.9
SDHCP3-201ENST00000445371 HNRNPUQ00839 825 aaKnown RBP eCLIP9.41□□□□□ -0.9
SDHCP3-201ENST00000445371 RRS1Q15050 365 aaKnown RBP9.41□□□□□ -0.9
SDHCP3-201ENST00000445371 POLKQ9UBT6 870 aa9.41□□□□□ -0.9
SDHCP3-201ENST00000445371 OVOS2A0A0J9YW53 1432 aa9.4□□□□□ -0.9
SDHCP3-201ENST00000445371 OVOS2Q6IE36 1432 aa9.4□□□□□ -0.9
SDHCP3-201ENST00000445371 ARHGEF10O15013 1369 aa9.4□□□□□ -0.9
SDHCP3-201ENST00000445371 EMILIN1Q9Y6C2 1016 aa9.4□□□□□ -0.9
SDHCP3-201ENST00000445371 MON2Q7Z3U7 1717 aa9.39□□□□□ -0.91
SDHCP3-201ENST00000445371 NEFMP07197 916 aa9.39□□□□□ -0.91
SDHCP3-201ENST00000445371 U2AF1L5P0DN76 240 aaPredicted RBP9.39□□□□□ -0.91
SDHCP3-201ENST00000445371 FBLN1P23142 703 aa9.39□□□□□ -0.91
SDHCP3-201ENST00000445371 U2AF1Q01081 240 aaKnown RBP eCLIP9.39□□□□□ -0.91
SDHCP3-201ENST00000445371 PNNQ9H307 717 aaKnown RBP9.39□□□□□ -0.91
SDHCP3-201ENST00000445371 TNS3Q68CZ2 1445 aa9.39□□□□□ -0.91
SDHCP3-201ENST00000445371 NRKQ7Z2Y5 1582 aa9.38□□□□□ -0.91
SDHCP3-201ENST00000445371 SPATA31A3Q5VYP0 1347 aa9.38□□□□□ -0.91
SDHCP3-201ENST00000445371 AKAP12Q02952 1782 aa9.38□□□□□ -0.91
SDHCP3-201ENST00000445371 GCP02774 474 aa9.38□□□□□ -0.91
SDHCP3-201ENST00000445371 ADAMTS8Q9UP79 889 aa9.38□□□□□ -0.91
SDHCP3-201ENST00000445371 XIRP1Q702N8 1843 aaKnown RBP9.38□□□□□ -0.91
SDHCP3-201ENST00000445371 SOS2Q07890 1332 aaPredicted RBP9.37□□□□□ -0.91
SDHCP3-201ENST00000445371 MAP3K19Q56UN5 1328 aa9.37□□□□□ -0.91
SDHCP3-201ENST00000445371 LRRC59Q96AG4 307 aaKnown RBP9.37□□□□□ -0.91
SDHCP3-201ENST00000445371 PHF23Q9BUL5 403 aaPredicted RBP9.37□□□□□ -0.91
SDHCP3-201ENST00000445371 FLT4P35916 1363 aa9.37□□□□□ -0.91
SDHCP3-201ENST00000445371 KIF20BQ96Q89 1820 aa9.36□□□□□ -0.91
SDHCP3-201ENST00000445371 PXDNQ92626 1479 aa9.36□□□□□ -0.91
SDHCP3-201ENST00000445371 KIF24Q5T7B8 1368 aa9.36□□□□□ -0.91
SDHCP3-201ENST00000445371 USP19O94966 1318 aa9.35□□□□□ -0.91
SDHCP3-201ENST00000445371 MAPK8IP3Q9UPT6 1336 aa9.35□□□□□ -0.91
SDHCP3-201ENST00000445371 CDK12Q9NYV4 1490 aaPredicted RBP9.35□□□□□ -0.91
SDHCP3-201ENST00000445371 ZC3H6P61129 1189 aaKnown RBP9.35□□□□□ -0.91
SDHCP3-201ENST00000445371 HSP90AB2PQ58FF8 381 aa9.35□□□□□ -0.91
SDHCP3-201ENST00000445371 SMG6Q86US8 1419 aaKnown RBP9.35□□□□□ -0.91
SDHCP3-201ENST00000445371 CCDC146Q8IYE0 955 aa9.35□□□□□ -0.91
SDHCP3-201ENST00000445371 INSRP06213 1382 aa9.35□□□□□ -0.91
SDHCP3-201ENST00000445371 PNPLA6Q8IY17 1366 aa9.35□□□□□ -0.91
SDHCP3-201ENST00000445371 HOXC9P31274 260 aa9.34□□□□□ -0.91
SDHCP3-201ENST00000445371 CABLES1Q8TDN4 633 aa9.34□□□□□ -0.91
SDHCP3-201ENST00000445371 RUNDC1Q96C34 613 aa9.34□□□□□ -0.91
SDHCP3-201ENST00000445371 LTV1Q96GA3 475 aaPredicted RBP9.34□□□□□ -0.91
SDHCP3-201ENST00000445371 PIK3C2AO00443 1686 aa9.34□□□□□ -0.91
SDHCP3-201ENST00000445371 RGPD8O14715 1765 aaPredicted RBP9.34□□□□□ -0.91
SDHCP3-201ENST00000445371 RTL1A6NKG5 1358 aa9.34□□□□□ -0.91
SDHCP3-201ENST00000445371 FCHSD2O94868 740 aa9.33□□□□□ -0.92
SDHCP3-201ENST00000445371 IL13P35225 146 aa9.33□□□□□ -0.92
SDHCP3-201ENST00000445371 EIF4A2Q14240 407 aaKnown RBP9.33□□□□□ -0.92
SDHCP3-201ENST00000445371 ARHGEF25Q86VW2 580 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms