RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 SLIT3O75094 1523 aa12.14□□□□□ -0.47
FXR1-203ENST00000445140 TTC21AQ8NDW8 1320 aa12.14□□□□□ -0.47
FXR1-203ENST00000445140 ARXQ96QS3 562 aa12.14□□□□□ -0.47
FXR1-203ENST00000445140 FOXD4L1Q9NU39 408 aa12.14□□□□□ -0.47
FXR1-203ENST00000445140 TERF2IPQ9NYB0 399 aa12.13□□□□□ -0.47
FXR1-203ENST00000445140 SRPK2P78362 688 aaKnown RBP12.13□□□□□ -0.47
FXR1-203ENST00000445140 CERKQ8TCT0 537 aa12.13□□□□□ -0.47
FXR1-203ENST00000445140 CABP2Q9NPB3 220 aa12.12□□□□□ -0.47
FXR1-203ENST00000445140 PER1O15534 1290 aaPredicted RBP12.12□□□□□ -0.47
FXR1-203ENST00000445140 PHLPP1O60346 1717 aa12.11□□□□□ -0.47
FXR1-203ENST00000445140 OVOS2A0A0J9YW53 1432 aa12.11□□□□□ -0.47
FXR1-203ENST00000445140 OVOS2Q6IE36 1432 aa12.11□□□□□ -0.47
FXR1-203ENST00000445140 PHF8Q9UPP1 1060 aa12.11□□□□□ -0.47
FXR1-203ENST00000445140 SOS2Q07890 1332 aaPredicted RBP12.1□□□□□ -0.47
FXR1-203ENST00000445140 SMG6Q86US8 1419 aaKnown RBP12.1□□□□□ -0.47
FXR1-203ENST00000445140 SAFB2Q14151 953 aaKnown RBP eCLIP12.1□□□□□ -0.47
FXR1-203ENST00000445140 HDGFL2Q7Z4V5 671 aaPredicted RBP12.1□□□□□ -0.47
FXR1-203ENST00000445140 HIRIP3Q9BW71 556 aaPredicted RBP12.1□□□□□ -0.47
FXR1-203ENST00000445140 SLAIN2Q9P270 581 aa12.1□□□□□ -0.47
FXR1-203ENST00000445140 NPHP3Q7Z494 1330 aa12.09□□□□□ -0.47
FXR1-203ENST00000445140 HAP1P54257 671 aaPredicted RBP12.09□□□□□ -0.47
FXR1-203ENST00000445140 TNS3Q68CZ2 1445 aa12.09□□□□□ -0.47
FXR1-203ENST00000445140 NSD3Q9BZ95 1437 aa12.09□□□□□ -0.47
FXR1-203ENST00000445140 CGNL1Q0VF96 1302 aa12.09□□□□□ -0.47
FXR1-203ENST00000445140 TOM1O60784 492 aa12.08□□□□□ -0.48
FXR1-203ENST00000445140 BRINP3Q76B58 766 aa12.08□□□□□ -0.48
FXR1-203ENST00000445140 C14orf37Q86TY3 774 aa12.08□□□□□ -0.48
FXR1-203ENST00000445140 ACEP12821 1306 aa12.08□□□□□ -0.48
FXR1-203ENST00000445140 PARD3Q8TEW0 1356 aa12.07□□□□□ -0.48
FXR1-203ENST00000445140 CABP1Q9NZU7 370 aa12.07□□□□□ -0.48
FXR1-203ENST00000445140 ARHGEF10O15013 1369 aa12.07□□□□□ -0.48
FXR1-203ENST00000445140 NFAT5O94916 1531 aa12.07□□□□□ -0.48
FXR1-203ENST00000445140 KIF24Q5T7B8 1368 aa12.06□□□□□ -0.48
FXR1-203ENST00000445140 AATKQ6ZMQ8 1374 aa12.06□□□□□ -0.48
FXR1-203ENST00000445140 SLC12A5Q9H2X9 1139 aa12.06□□□□□ -0.48
FXR1-203ENST00000445140 USP19O94966 1318 aa12.06□□□□□ -0.48
FXR1-203ENST00000445140 TULP1O00294 542 aaPredicted RBP12.05□□□□□ -0.48
FXR1-203ENST00000445140 CARD14Q9BXL6 1004 aa12.05□□□□□ -0.48
FXR1-203ENST00000445140 PANK3Q9H999 370 aa12.05□□□□□ -0.48
FXR1-203ENST00000445140 FAM208AQ9UK61 1670 aaKnown RBP12.05□□□□□ -0.48
FXR1-203ENST00000445140 PSME1Q06323 249 aa12.04□□□□□ -0.48
FXR1-203ENST00000445140 TTC21BQ7Z4L5 1316 aa12.04□□□□□ -0.48
FXR1-203ENST00000445140 INSRP06213 1382 aa12.03□□□□□ -0.48
FXR1-203ENST00000445140 CAMTA1Q9Y6Y1 1673 aa12.03□□□□□ -0.48
FXR1-203ENST00000445140 COL18A1P39060 1754 aa12.02□□□□□ -0.48
FXR1-203ENST00000445140 SPATA31A3Q5VYP0 1347 aa12.02□□□□□ -0.49
FXR1-203ENST00000445140 ESCO1Q5FWF5 840 aa12.02□□□□□ -0.49
FXR1-203ENST00000445140 ORAI2Q96SN7 254 aa12.02□□□□□ -0.49
FXR1-203ENST00000445140 LTN1O94822 1766 aa12.02□□□□□ -0.49
FXR1-203ENST00000445140 LMO7Q8WWI1 1683 aa12.02□□□□□ -0.49
FXR1-203ENST00000445140 RALBP1Q15311 655 aa12.02□□□□□ -0.49
FXR1-203ENST00000445140 RTL1A6NKG5 1358 aa12.01□□□□□ -0.49
FXR1-203ENST00000445140 RBM33Q96EV2 1170 aaKnown RBP12.01□□□□□ -0.49
FXR1-203ENST00000445140 KNSTRNQ9Y448 316 aa12.01□□□□□ -0.49
FXR1-203ENST00000445140 NWD2Q9ULI1 1742 aa12.01□□□□□ -0.49
FXR1-203ENST00000445140 CDK12Q9NYV4 1490 aaPredicted RBP12.01□□□□□ -0.49
FXR1-203ENST00000445140 NGDNQ8NEJ9 315 aaKnown RBP12□□□□□ -0.49
FXR1-203ENST00000445140 TMC1Q8TDI8 760 aa12□□□□□ -0.49
FXR1-203ENST00000445140 CPDO75976 1380 aa12□□□□□ -0.49
FXR1-203ENST00000445140 TNKS1BP1Q9C0C2 1729 aaKnown RBP12□□□□□ -0.49
FXR1-203ENST00000445140 MAP2P11137 1827 aaKnown RBP12□□□□□ -0.49
FXR1-203ENST00000445140 PLEKHG2Q9H7P9 1386 aa12□□□□□ -0.49
FXR1-203ENST00000445140 COL14A1Q05707 1796 aaKnown RBP11.99□□□□□ -0.49
FXR1-203ENST00000445140 FYB1O15117 783 aa11.99□□□□□ -0.49
FXR1-203ENST00000445140 KRT28Q7Z3Y7 464 aa11.99□□□□□ -0.49
FXR1-203ENST00000445140 PNPLA6Q8IY17 1366 aa11.99□□□□□ -0.49
FXR1-203ENST00000445140 RGPD1P0DJD0 1748 aa11.99□□□□□ -0.49
FXR1-203ENST00000445140 DDX10Q13206 875 aaKnown RBP11.98□□□□□ -0.49
FXR1-203ENST00000445140 PEAK1Q9H792 1746 aa11.98□□□□□ -0.49
FXR1-203ENST00000445140 COL3A1P02461 1466 aaPredicted RBP11.98□□□□□ -0.49
FXR1-203ENST00000445140 UBAP1LF5GYI3 381 aa11.96□□□□□ -0.49
FXR1-203ENST00000445140 NRAPQ86VF7 1730 aa11.96□□□□□ -0.49
FXR1-203ENST00000445140 PMFBP1Q8TBY8 1022 aa11.96□□□□□ -0.5
FXR1-203ENST00000445140 LRRC59Q96AG4 307 aaKnown RBP11.96□□□□□ -0.5
FXR1-203ENST00000445140 PRKRIP1Q9H875 184 aaPredicted RBP11.96□□□□□ -0.5
FXR1-203ENST00000445140 NCAPD2Q15021 1401 aa11.95□□□□□ -0.5
FXR1-203ENST00000445140 PLCH1Q4KWH8 1693 aa11.95□□□□□ -0.5
FXR1-203ENST00000445140 JCADQ9P266 1359 aa11.95□□□□□ -0.5
FXR1-203ENST00000445140 NLRP13Q86W25 1043 aa11.95□□□□□ -0.5
FXR1-203ENST00000445140 KCNH5Q8NCM2 988 aa11.95□□□□□ -0.5
FXR1-203ENST00000445140 MYBBP1AQ9BQG0 1328 aaKnown RBP11.95□□□□□ -0.5
FXR1-203ENST00000445140 BLMP54132 1417 aaPredicted RBP11.95□□□□□ -0.5
FXR1-203ENST00000445140 CCER2I3L3R5 266 aa11.94□□□□□ -0.5
FXR1-203ENST00000445140 FOXO3O43524 673 aa11.94□□□□□ -0.5
FXR1-203ENST00000445140 COG3Q96JB2 828 aa11.94□□□□□ -0.5
FXR1-203ENST00000445140 WNK3Q9BYP7 1800 aa11.93□□□□□ -0.5
FXR1-203ENST00000445140 SPATA31A6Q5VVP1 1343 aa11.93□□□□□ -0.5
FXR1-203ENST00000445140 NUTM2FA1L443 756 aa11.92□□□□□ -0.5
FXR1-203ENST00000445140 DIEXFQ68CQ4 756 aaKnown RBP11.92□□□□□ -0.5
FXR1-203ENST00000445140 NME9Q86XW9 330 aa11.92□□□□□ -0.5
FXR1-203ENST00000445140 FBXO41Q8TF61 875 aa11.92□□□□□ -0.5
FXR1-203ENST00000445140 ANP32CO43423 234 aa11.91□□□□□ -0.5
FXR1-203ENST00000445140 POLR3GLQ9BT43 218 aa11.9□□□□□ -0.5
FXR1-203ENST00000445140 FLT4P35916 1363 aa11.9□□□□□ -0.5
FXR1-203ENST00000445140 ABTB2Q8N961 1025 aa11.9□□□□□ -0.5
FXR1-203ENST00000445140 MORC1Q86VD1 984 aa11.89□□□□□ -0.51
FXR1-203ENST00000445140 PPP2R1AP30153 589 aa11.89□□□□□ -0.51
FXR1-203ENST00000445140 RGPD5Q99666 1765 aa11.88□□□□□ -0.51
FXR1-203ENST00000445140 ARHGEF25Q86VW2 580 aa11.88□□□□□ -0.51
FXR1-203ENST00000445140 NLRP6P59044 892 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms