RNA–Protein interactions for RNA: ENST00000444184.5

LINC00963-205, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 1,887 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-205ENST00000444184 PTPRUQ92729 1446 aa25.42■■□□□ 1.66
LINC00963-205ENST00000444184 AMOTL2Q9Y2J4 779 aa25.42■■□□□ 1.66
LINC00963-205ENST00000444184 RRP7AQ9Y3A4 280 aaKnown RBP25.42■■□□□ 1.66
LINC00963-205ENST00000444184 U2SURPO15042 1029 aaKnown RBP25.41■■□□□ 1.66
LINC00963-205ENST00000444184 ZNF692Q9BU19 519 aaPredicted RBP25.4■■□□□ 1.66
LINC00963-205ENST00000444184 DMRT2Q9Y5R5 561 aa25.4■■□□□ 1.66
LINC00963-205ENST00000444184 IQSEC2Q5JU85 1478 aa25.4■■□□□ 1.66
LINC00963-205ENST00000444184 PRR36Q9H6K5 1346 aa25.39■■□□□ 1.66
LINC00963-205ENST00000444184 COL3A1P02461 1466 aaPredicted RBP25.39■■□□□ 1.66
LINC00963-205ENST00000444184 CDC42BPGQ6DT37 1551 aa25.39■■□□□ 1.65
LINC00963-205ENST00000444184 NKTRP30414 1462 aaKnown RBP25.39■■□□□ 1.65
LINC00963-205ENST00000444184 NCBP3Q53F19 620 aaKnown RBP25.38■■□□□ 1.65
LINC00963-205ENST00000444184 DIAPH1O60610 1272 aaKnown RBP25.38■■□□□ 1.65
LINC00963-205ENST00000444184 CCDC27Q2M243 656 aa25.38■■□□□ 1.65
LINC00963-205ENST00000444184 PHF23Q9BUL5 403 aaPredicted RBP25.38■■□□□ 1.65
LINC00963-205ENST00000444184 PNPLA6Q8IY17 1366 aa25.37■■□□□ 1.65
LINC00963-205ENST00000444184 NME9Q86XW9 330 aa25.37■■□□□ 1.65
LINC00963-205ENST00000444184 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.37■■□□□ 1.65
LINC00963-205ENST00000444184 ADGRB2O60241 1585 aa25.37■■□□□ 1.65
LINC00963-205ENST00000444184 WDR63Q8IWG1 891 aa25.36■■□□□ 1.65
LINC00963-205ENST00000444184 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.36■■□□□ 1.65
LINC00963-205ENST00000444184 POLKQ9UBT6 870 aa25.36■■□□□ 1.65
LINC00963-205ENST00000444184 ANKLE2Q86XL3 938 aa25.35■■□□□ 1.65
LINC00963-205ENST00000444184 XRN1Q8IZH2 1706 aaKnown RBP25.34■■□□□ 1.65
LINC00963-205ENST00000444184 COG3Q96JB2 828 aa25.33■■□□□ 1.65
LINC00963-205ENST00000444184 CRBNQ96SW2 442 aa25.33■■□□□ 1.65
LINC00963-205ENST00000444184 PPM1GO15355 546 aaPredicted RBP25.32■■□□□ 1.64
LINC00963-205ENST00000444184 FBLN1P23142 703 aa25.32■■□□□ 1.64
LINC00963-205ENST00000444184 PLEKHF1Q96S99 279 aa25.32■■□□□ 1.64
LINC00963-205ENST00000444184 PNNQ9H307 717 aaKnown RBP25.32■■□□□ 1.64
LINC00963-205ENST00000444184 PLEKHG3A1L390 1219 aa25.32■■□□□ 1.64
LINC00963-205ENST00000444184 PTCH1Q13635 1447 aa25.32■■□□□ 1.64
LINC00963-205ENST00000444184 ZRANB1Q9UGI0 708 aa25.32■■□□□ 1.64
LINC00963-205ENST00000444184 NUTM2FA1L443 756 aa25.31■■□□□ 1.64
LINC00963-205ENST00000444184 RBM19Q9Y4C8 960 aaKnown RBP25.31■■□□□ 1.64
LINC00963-205ENST00000444184 MON2Q7Z3U7 1717 aa25.31■■□□□ 1.64
LINC00963-205ENST00000444184 PIK3R4Q99570 1358 aa25.3■■□□□ 1.64
LINC00963-205ENST00000444184 MAPK8IP3Q9UPT6 1336 aa25.3■■□□□ 1.64
LINC00963-205ENST00000444184 ACEP12821 1306 aa25.29■■□□□ 1.64
LINC00963-205ENST00000444184 C20orf194Q5TEA3 1177 aa25.29■■□□□ 1.64
LINC00963-205ENST00000444184 AKAP12Q02952 1782 aa25.29■■□□□ 1.64
LINC00963-205ENST00000444184 ITSN1Q15811 1721 aa25.29■■□□□ 1.64
LINC00963-205ENST00000444184 AATKQ6ZMQ8 1374 aa25.28■■□□□ 1.64
LINC00963-205ENST00000444184 TMPOP42166 694 aaKnown RBP25.26■■□□□ 1.63
LINC00963-205ENST00000444184 EMILIN1Q9Y6C2 1016 aa25.26■■□□□ 1.63
LINC00963-205ENST00000444184 TTC21BQ7Z4L5 1316 aa25.25■■□□□ 1.63
LINC00963-205ENST00000444184 BCAR3O75815 825 aa25.25■■□□□ 1.63
LINC00963-205ENST00000444184 FCHSD2O94868 740 aa25.25■■□□□ 1.63
LINC00963-205ENST00000444184 MYH16Q9H6N6 1097 aa25.24■■□□□ 1.63
LINC00963-205ENST00000444184 CHD2O14647 1828 aaKnown RBP25.24■■□□□ 1.63
LINC00963-205ENST00000444184 MAP2P11137 1827 aaKnown RBP25.24■■□□□ 1.63
LINC00963-205ENST00000444184 TOPAZ1Q8N9V7 1692 aa25.23■■□□□ 1.63
LINC00963-205ENST00000444184 NPHP4O75161 1426 aaPredicted RBP25.23■■□□□ 1.63
LINC00963-205ENST00000444184 KCNA6P17658 529 aa25.22■■□□□ 1.63
LINC00963-205ENST00000444184 NEFMP07197 916 aa25.2■■□□□ 1.62
LINC00963-205ENST00000444184 USP6P35125 1406 aa25.2■■□□□ 1.62
LINC00963-205ENST00000444184 TRIM35Q9UPQ4 493 aa25.2■■□□□ 1.62
LINC00963-205ENST00000444184 RIPK4P57078 832 aa25.19■■□□□ 1.62
LINC00963-205ENST00000444184 RRS1Q15050 365 aaKnown RBP25.19■■□□□ 1.62
LINC00963-205ENST00000444184 CDK12Q9NYV4 1490 aaPredicted RBP25.19■■□□□ 1.62
LINC00963-205ENST00000444184 KDM4FA0A1W2PPD8 638 aa25.19■■□□□ 1.62
LINC00963-205ENST00000444184 IL13P35225 146 aa25.19■■□□□ 1.62
LINC00963-205ENST00000444184 RSPH6AQ9H0K4 717 aa25.19■■□□□ 1.62
LINC00963-205ENST00000444184 PMFBP1Q8TBY8 1022 aa25.18■■□□□ 1.62
LINC00963-205ENST00000444184 PRKAR2BP31323 418 aa25.17■■□□□ 1.62
LINC00963-205ENST00000444184 NGDNQ8NEJ9 315 aaKnown RBP25.16■■□□□ 1.62
LINC00963-205ENST00000444184 RARSP54136 660 aaKnown RBP25.15■■□□□ 1.62
LINC00963-205ENST00000444184 NRKQ7Z2Y5 1582 aa25.15■■□□□ 1.62
LINC00963-205ENST00000444184 HMOX1P09601 288 aa25.15■■□□□ 1.62
LINC00963-205ENST00000444184 IL16Q14005 1332 aa25.15■■□□□ 1.62
LINC00963-205ENST00000444184 CANXP27824 592 aaKnown RBP25.14■■□□□ 1.61
LINC00963-205ENST00000444184 LRRC7Q96NW7 1537 aa25.13■■□□□ 1.61
LINC00963-205ENST00000444184 TTC21AQ8NDW8 1320 aa25.13■■□□□ 1.61
LINC00963-205ENST00000444184 SSH2Q76I76 1423 aa25.13■■□□□ 1.61
LINC00963-205ENST00000444184 OVOS2A0A0J9YW53 1432 aa25.12■■□□□ 1.61
LINC00963-205ENST00000444184 OVOS2Q6IE36 1432 aa25.12■■□□□ 1.61
LINC00963-205ENST00000444184 PDE3AQ14432 1141 aa25.12■■□□□ 1.61
LINC00963-205ENST00000444184 ANKARQ7Z5J8 1434 aa25.11■■□□□ 1.61
LINC00963-205ENST00000444184 FANCIQ9NVI1 1328 aa25.11■■□□□ 1.61
LINC00963-205ENST00000444184 TSR2Q969E8 191 aaKnown RBP25.1■■□□□ 1.61
LINC00963-205ENST00000444184 CT47B1P0C2W7 299 aaPredicted RBP25.09■■□□□ 1.61
LINC00963-205ENST00000444184 NFE2L2Q16236 605 aa25.09■■□□□ 1.61
LINC00963-205ENST00000444184 PHACTR3Q96KR7 559 aa25.09■■□□□ 1.61
LINC00963-205ENST00000444184 NWD1Q149M9 1564 aa25.09■■□□□ 1.61
LINC00963-205ENST00000444184 FRAT1Q92837 279 aaPredicted RBP25.09■■□□□ 1.61
LINC00963-205ENST00000444184 USP31Q70CQ4 1352 aa25.08■■□□□ 1.6
LINC00963-205ENST00000444184 NALCNQ8IZF0 1738 aa25.08■■□□□ 1.6
LINC00963-205ENST00000444184 EXOSC9Q06265 439 aaKnown RBP25.06■■□□□ 1.6
LINC00963-205ENST00000444184 RGPD8O14715 1765 aaPredicted RBP25.06■■□□□ 1.6
LINC00963-205ENST00000444184 FMN2Q9NZ56 1722 aa25.05■■□□□ 1.6
LINC00963-205ENST00000444184 EIF4A2Q14240 407 aaKnown RBP25.04■■□□□ 1.6
LINC00963-205ENST00000444184 LMTK3Q96Q04 1460 aa25.03■■□□□ 1.6
LINC00963-205ENST00000444184 TCERG1O14776 1098 aaKnown RBP25.03■■□□□ 1.6
LINC00963-205ENST00000444184 PANK1Q8TE04 598 aa25.03■■□□□ 1.6
LINC00963-205ENST00000444184 BCL2L13Q9BXK5 485 aa25.03■■□□□ 1.6
LINC00963-205ENST00000444184 SOX12O15370 315 aa25.02■■□□□ 1.6
LINC00963-205ENST00000444184 CENPQQ7L2Z9 268 aaPredicted RBP25.02■■□□□ 1.6
LINC00963-205ENST00000444184 KDM2BQ8NHM5 1336 aa25.02■■□□□ 1.6
LINC00963-205ENST00000444184 CALD1Q05682 793 aaKnown RBP25.02■■□□□ 1.6
LINC00963-205ENST00000444184 HSPA2P54652 639 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms