RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 BTG4Q9NY30 223 aa23.55■■□□□ 1.36
CTDSP1-204ENST00000443891 BLMP54132 1417 aaPredicted RBP23.55■■□□□ 1.36
CTDSP1-204ENST00000443891 COL14A1Q05707 1796 aaKnown RBP23.55■■□□□ 1.36
CTDSP1-204ENST00000443891 PLEKHG5O94827 1062 aa23.54■■□□□ 1.36
CTDSP1-204ENST00000443891 NBPF1Q3BBV0 1214 aa23.54■■□□□ 1.36
CTDSP1-204ENST00000443891 CENPJQ9HC77 1338 aaPredicted RBP23.54■■□□□ 1.36
CTDSP1-204ENST00000443891 NBPF8Q3BBV2 869 aa23.53■■□□□ 1.36
CTDSP1-204ENST00000443891 KRT27Q7Z3Y8 459 aa23.52■■□□□ 1.36
CTDSP1-204ENST00000443891 ZRANB1Q9UGI0 708 aa23.52■■□□□ 1.36
CTDSP1-204ENST00000443891 ACEP12821 1306 aa23.52■■□□□ 1.36
CTDSP1-204ENST00000443891 BRD4O60885 1362 aaPredicted RBP23.52■■□□□ 1.36
CTDSP1-204ENST00000443891 PRDM11Q9NQV5 511 aa23.51■■□□□ 1.35
CTDSP1-204ENST00000443891 SF3B2Q13435 895 aaKnown RBP23.5■■□□□ 1.35
CTDSP1-204ENST00000443891 TOPAZ1Q8N9V7 1692 aa23.49■■□□□ 1.35
CTDSP1-204ENST00000443891 L3MBTL2Q969R5 705 aa23.49■■□□□ 1.35
CTDSP1-204ENST00000443891 NRAPQ86VF7 1730 aa23.49■■□□□ 1.35
CTDSP1-204ENST00000443891 CRYBG1Q9Y4K1 1723 aa23.48■■□□□ 1.35
CTDSP1-204ENST00000443891 SPATA31A5Q5VU36 1347 aa23.48■■□□□ 1.35
CTDSP1-204ENST00000443891 SPATA31A7Q8IWB4 1347 aa23.48■■□□□ 1.35
CTDSP1-204ENST00000443891 SRPK2P78362 688 aaKnown RBP23.47■■□□□ 1.35
CTDSP1-204ENST00000443891 EP400Q96L91 3159 aa23.46■■□□□ 1.35
CTDSP1-204ENST00000443891 FAM98CQ17RN3 349 aaKnown RBP23.45■■□□□ 1.34
CTDSP1-204ENST00000443891 KIAA0232Q92628 1395 aa23.44■■□□□ 1.34
CTDSP1-204ENST00000443891 BRWD3Q6RI45 1802 aa23.44■■□□□ 1.34
CTDSP1-204ENST00000443891 PPIP5K1Q6PFW1 1433 aa23.43■■□□□ 1.34
CTDSP1-204ENST00000443891 A0A0G2JS52 829 aa23.43■■□□□ 1.34
CTDSP1-204ENST00000443891 MYT1Q01538 1121 aa23.43■■□□□ 1.34
CTDSP1-204ENST00000443891 NLRP13Q86W25 1043 aa23.43■■□□□ 1.34
CTDSP1-204ENST00000443891 ABTB2Q8N961 1025 aa23.43■■□□□ 1.34
CTDSP1-204ENST00000443891 CPDO75976 1380 aa23.41■■□□□ 1.34
CTDSP1-204ENST00000443891 USP19O94966 1318 aa23.41■■□□□ 1.34
CTDSP1-204ENST00000443891 PHRF1Q9P1Y6 1649 aaKnown RBP23.41■■□□□ 1.34
CTDSP1-204ENST00000443891 SPATA31A1Q5TZJ5 1347 aa23.4■■□□□ 1.34
CTDSP1-204ENST00000443891 EVC2Q86UK5 1308 aa23.4■■□□□ 1.34
CTDSP1-204ENST00000443891 CABP2Q9NPB3 220 aa23.4■■□□□ 1.34
CTDSP1-204ENST00000443891 ZC3H6P61129 1189 aaKnown RBP23.39■■□□□ 1.33
CTDSP1-204ENST00000443891 SIN3AQ96ST3 1273 aa23.39■■□□□ 1.33
CTDSP1-204ENST00000443891 BAG6P46379 1132 aa23.38■■□□□ 1.33
CTDSP1-204ENST00000443891 NUTM2GQ5VZR2 741 aa23.37■■□□□ 1.33
CTDSP1-204ENST00000443891 ROCK2O75116 1388 aaKnown RBP23.37■■□□□ 1.33
CTDSP1-204ENST00000443891 QRICH2Q9H0J4 1663 aa23.36■■□□□ 1.33
CTDSP1-204ENST00000443891 CHRNA2Q15822 529 aa23.36■■□□□ 1.33
CTDSP1-204ENST00000443891 CABP1Q9NZU7 370 aa23.36■■□□□ 1.33
CTDSP1-204ENST00000443891 TRPM1Q7Z4N2 1603 aa23.36■■□□□ 1.33
CTDSP1-204ENST00000443891 THSD7AQ9UPZ6 1657 aa23.35■■□□□ 1.33
CTDSP1-204ENST00000443891 GCP02774 474 aa23.35■■□□□ 1.33
CTDSP1-204ENST00000443891 EVA1CP58658 441 aa23.35■■□□□ 1.33
CTDSP1-204ENST00000443891 NEUROD1Q13562 356 aa23.35■■□□□ 1.33
CTDSP1-204ENST00000443891 BARGINQ6ZT62 677 aa23.35■■□□□ 1.33
CTDSP1-204ENST00000443891 DEFB132Q7Z7B7 95 aa23.35■■□□□ 1.33
CTDSP1-204ENST00000443891 ZNF692Q9BU19 519 aaPredicted RBP23.35■■□□□ 1.33
CTDSP1-204ENST00000443891 USP6P35125 1406 aa23.34■■□□□ 1.33
CTDSP1-204ENST00000443891 NRKQ7Z2Y5 1582 aa23.34■■□□□ 1.33
CTDSP1-204ENST00000443891 STRN4Q9NRL3 753 aa23.33■■□□□ 1.33
CTDSP1-204ENST00000443891 THRAP3Q9Y2W1 955 aaKnown RBP23.33■■□□□ 1.33
CTDSP1-204ENST00000443891 SSH2Q76I76 1423 aa23.33■■□□□ 1.32
CTDSP1-204ENST00000443891 FAM196AQ6ZSG2 479 aa23.31■■□□□ 1.32
CTDSP1-204ENST00000443891 DISP2A7MBM2 1401 aa23.3■■□□□ 1.32
CTDSP1-204ENST00000443891 SBNO2Q9Y2G9 1366 aa23.29■■□□□ 1.32
CTDSP1-204ENST00000443891 NLRP6P59044 892 aa23.29■■□□□ 1.32
CTDSP1-204ENST00000443891 TCP11L2Q8N4U5 519 aa23.29■■□□□ 1.32
CTDSP1-204ENST00000443891 LMO7Q8WWI1 1683 aa23.28■■□□□ 1.32
CTDSP1-204ENST00000443891 CAMTA1Q9Y6Y1 1673 aa23.28■■□□□ 1.32
CTDSP1-204ENST00000443891 C11orf95C9JLR9 678 aaPredicted RBP23.27■■□□□ 1.32
CTDSP1-204ENST00000443891 AATKQ6ZMQ8 1374 aa23.27■■□□□ 1.31
CTDSP1-204ENST00000443891 RGPD1P0DJD0 1748 aa23.26■■□□□ 1.31
CTDSP1-204ENST00000443891 SLIT3O75094 1523 aa23.26■■□□□ 1.31
CTDSP1-204ENST00000443891 TTC21AQ8NDW8 1320 aa23.26■■□□□ 1.31
CTDSP1-204ENST00000443891 PDE3BQ13370 1112 aa23.25■■□□□ 1.31
CTDSP1-204ENST00000443891 LARP1Q6PKG0 1096 aaKnown RBP23.25■■□□□ 1.31
CTDSP1-204ENST00000443891 KCNH5Q8NCM2 988 aa23.24■■□□□ 1.31
CTDSP1-204ENST00000443891 COL5A2P05997 1499 aaPredicted RBP23.24■■□□□ 1.31
CTDSP1-204ENST00000443891 USP35Q9P2H5 1018 aa23.23■■□□□ 1.31
CTDSP1-204ENST00000443891 TTC21BQ7Z4L5 1316 aa23.23■■□□□ 1.31
CTDSP1-204ENST00000443891 PARD3Q8TEW0 1356 aa23.22■■□□□ 1.31
CTDSP1-204ENST00000443891 CRB1P82279 1406 aa23.22■■□□□ 1.31
CTDSP1-204ENST00000443891 CPSF1Q10570 1443 aaKnown RBP23.22■■□□□ 1.31
CTDSP1-204ENST00000443891 FAM182BQ5T319 152 aa23.21■■□□□ 1.31
CTDSP1-204ENST00000443891 CARD11Q9BXL7 1154 aa23.21■■□□□ 1.31
CTDSP1-204ENST00000443891 TONSLQ96HA7 1378 aa23.2■■□□□ 1.3
CTDSP1-204ENST00000443891 EN1Q05925 392 aaPredicted RBP23.2■■□□□ 1.3
CTDSP1-204ENST00000443891 PUS7Q96PZ0 661 aaKnown RBP23.19■■□□□ 1.3
CTDSP1-204ENST00000443891 KTN1Q86UP2 1357 aaKnown RBP23.17■■□□□ 1.3
CTDSP1-204ENST00000443891 PIK3C2AO00443 1686 aa23.17■■□□□ 1.3
CTDSP1-204ENST00000443891 SLC24A1O60721 1099 aa23.17■■□□□ 1.3
CTDSP1-204ENST00000443891 ARHGEF25Q86VW2 580 aa23.17■■□□□ 1.3
CTDSP1-204ENST00000443891 SRCAPQ6ZRS2 3230 aa23.17■■□□□ 1.3
CTDSP1-204ENST00000443891 TRIM37O94972 964 aa23.16■■□□□ 1.3
CTDSP1-204ENST00000443891 CAMKK2Q96RR4 588 aa23.16■■□□□ 1.3
CTDSP1-204ENST00000443891 CDCA7Q9BWT1 371 aaPredicted RBP23.16■■□□□ 1.3
CTDSP1-204ENST00000443891 AKAP12Q02952 1782 aa23.15■■□□□ 1.3
CTDSP1-204ENST00000443891 TNS1Q9HBL0 1735 aaKnown RBP23.15■■□□□ 1.3
CTDSP1-204ENST00000443891 WDR17Q8IZU2 1322 aa23.14■■□□□ 1.3
CTDSP1-204ENST00000443891 TOM1L2Q6ZVM7 507 aa23.14■■□□□ 1.29
CTDSP1-204ENST00000443891 PARP4Q9UKK3 1724 aaKnown RBP23.13■■□□□ 1.29
CTDSP1-204ENST00000443891 APBA3O96018 575 aa23.13■■□□□ 1.29
CTDSP1-204ENST00000443891 ABCC6O95255 1503 aa23.13■■□□□ 1.29
CTDSP1-204ENST00000443891 LRP5O75197 1615 aa23.12■■□□□ 1.29
CTDSP1-204ENST00000443891 ZBTB7CA1YPR0 619 aa23.12■■□□□ 1.29
CTDSP1-204ENST00000443891 EZH2Q15910 746 aaKnown RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms