RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 ANKRD26Q9UPS8 1709 aa12.76□□□□□ -0.37
SMPD4P1-203ENST00000443839 TMEM94Q12767 1356 aa12.76□□□□□ -0.37
SMPD4P1-203ENST00000443839 USP6P35125 1406 aa12.74□□□□□ -0.37
SMPD4P1-203ENST00000443839 C19orf44Q9H6X5 657 aa12.74□□□□□ -0.37
SMPD4P1-203ENST00000443839 POLR3AO14802 1390 aaPredicted RBP12.74□□□□□ -0.37
SMPD4P1-203ENST00000443839 NME9Q86XW9 330 aa12.74□□□□□ -0.37
SMPD4P1-203ENST00000443839 WDR43Q15061 677 aaKnown RBP eCLIP12.73□□□□□ -0.37
SMPD4P1-203ENST00000443839 DMRT2Q9Y5R5 561 aa12.73□□□□□ -0.37
SMPD4P1-203ENST00000443839 ESCO1Q5FWF5 840 aa12.73□□□□□ -0.37
SMPD4P1-203ENST00000443839 PHF8Q9UPP1 1060 aa12.73□□□□□ -0.37
SMPD4P1-203ENST00000443839 TTC21BQ7Z4L5 1316 aa12.73□□□□□ -0.37
SMPD4P1-203ENST00000443839 NCOA3Q9Y6Q9 1424 aa12.72□□□□□ -0.37
SMPD4P1-203ENST00000443839 NRKQ7Z2Y5 1582 aa12.72□□□□□ -0.37
SMPD4P1-203ENST00000443839 ATF3P18847 181 aa12.72□□□□□ -0.37
SMPD4P1-203ENST00000443839 MTHFSP49914 203 aa12.72□□□□□ -0.37
SMPD4P1-203ENST00000443839 COG3Q96JB2 828 aa12.72□□□□□ -0.37
SMPD4P1-203ENST00000443839 ZNF335Q9H4Z2 1342 aaPredicted RBP12.72□□□□□ -0.37
SMPD4P1-203ENST00000443839 CFAP53Q96M91 514 aa12.71□□□□□ -0.37
SMPD4P1-203ENST00000443839 DCCP43146 1447 aa12.7□□□□□ -0.38
SMPD4P1-203ENST00000443839 MSH6P52701 1360 aa12.7□□□□□ -0.38
SMPD4P1-203ENST00000443839 TTC21AQ8NDW8 1320 aa12.7□□□□□ -0.38
SMPD4P1-203ENST00000443839 ZRANB1Q9UGI0 708 aa12.7□□□□□ -0.38
SMPD4P1-203ENST00000443839 SSH2Q76I76 1423 aa12.69□□□□□ -0.38
SMPD4P1-203ENST00000443839 CADPS2Q86UW7 1296 aa12.68□□□□□ -0.38
SMPD4P1-203ENST00000443839 ADAMTS8Q9UP79 889 aa12.68□□□□□ -0.38
SMPD4P1-203ENST00000443839 PAK3O75914 559 aaPredicted RBP12.68□□□□□ -0.38
SMPD4P1-203ENST00000443839 ORAI2Q96SN7 254 aa12.68□□□□□ -0.38
SMPD4P1-203ENST00000443839 LRRC7Q96NW7 1537 aa12.68□□□□□ -0.38
SMPD4P1-203ENST00000443839 C1orf167Q5SNV9 1468 aa12.68□□□□□ -0.38
SMPD4P1-203ENST00000443839 ZBED9Q6R2W3 1325 aa12.67□□□□□ -0.38
SMPD4P1-203ENST00000443839 PSME1Q06323 249 aa12.67□□□□□ -0.38
SMPD4P1-203ENST00000443839 INSRP06213 1382 aa12.67□□□□□ -0.38
SMPD4P1-203ENST00000443839 PPM1GO15355 546 aaPredicted RBP12.66□□□□□ -0.38
SMPD4P1-203ENST00000443839 XIRP1Q702N8 1843 aaKnown RBP12.66□□□□□ -0.38
SMPD4P1-203ENST00000443839 OVOS2A0A0J9YW53 1432 aa12.66□□□□□ -0.38
SMPD4P1-203ENST00000443839 BLMP54132 1417 aaPredicted RBP12.66□□□□□ -0.38
SMPD4P1-203ENST00000443839 MST1RQ04912 1400 aa12.66□□□□□ -0.38
SMPD4P1-203ENST00000443839 OVOS2Q6IE36 1432 aa12.66□□□□□ -0.38
SMPD4P1-203ENST00000443839 FOXO3O43524 673 aa12.65□□□□□ -0.38
SMPD4P1-203ENST00000443839 MAP2P11137 1827 aaKnown RBP12.65□□□□□ -0.38
SMPD4P1-203ENST00000443839 SENP3-EIF4A1A0A087X0R7 540 aa12.65□□□□□ -0.38
SMPD4P1-203ENST00000443839 FBLN1P23142 703 aa12.65□□□□□ -0.38
SMPD4P1-203ENST00000443839 ABTB2Q8N961 1025 aa12.65□□□□□ -0.38
SMPD4P1-203ENST00000443839 POLKQ9UBT6 870 aa12.65□□□□□ -0.38
SMPD4P1-203ENST00000443839 KIF1AQ12756 1690 aa12.65□□□□□ -0.38
SMPD4P1-203ENST00000443839 AATKQ6ZMQ8 1374 aa12.65□□□□□ -0.39
SMPD4P1-203ENST00000443839 PIK3C2AO00443 1686 aa12.64□□□□□ -0.39
SMPD4P1-203ENST00000443839 SHPRHQ149N8 1683 aa12.64□□□□□ -0.39
SMPD4P1-203ENST00000443839 NLRP6P59044 892 aa12.64□□□□□ -0.39
SMPD4P1-203ENST00000443839 DAXXQ9UER7 740 aaPredicted RBP12.64□□□□□ -0.39
SMPD4P1-203ENST00000443839 SOX12O15370 315 aa12.63□□□□□ -0.39
SMPD4P1-203ENST00000443839 NUDCQ9Y266 331 aa12.63□□□□□ -0.39
SMPD4P1-203ENST00000443839 EMILIN1Q9Y6C2 1016 aa12.63□□□□□ -0.39
SMPD4P1-203ENST00000443839 USP31Q70CQ4 1352 aa12.63□□□□□ -0.39
SMPD4P1-203ENST00000443839 XPCQ01831 940 aaPredicted RBP12.62□□□□□ -0.39
SMPD4P1-203ENST00000443839 RRS1Q15050 365 aaKnown RBP12.62□□□□□ -0.39
SMPD4P1-203ENST00000443839 NUTM2GQ5VZR2 741 aa12.62□□□□□ -0.39
SMPD4P1-203ENST00000443839 PNPLA6Q8IY17 1366 aa12.62□□□□□ -0.39
SMPD4P1-203ENST00000443839 SMG6Q86US8 1419 aaKnown RBP12.62□□□□□ -0.39
SMPD4P1-203ENST00000443839 COL3A1P02461 1466 aaPredicted RBP12.61□□□□□ -0.39
SMPD4P1-203ENST00000443839 CDK12Q9NYV4 1490 aaPredicted RBP12.61□□□□□ -0.39
SMPD4P1-203ENST00000443839 DIAPH1O60610 1272 aaKnown RBP12.61□□□□□ -0.39
SMPD4P1-203ENST00000443839 U2AF1L5P0DN76 240 aaPredicted RBP12.61□□□□□ -0.39
SMPD4P1-203ENST00000443839 U2AF1Q01081 240 aaKnown RBP eCLIP12.61□□□□□ -0.39
SMPD4P1-203ENST00000443839 CCDC146Q8IYE0 955 aa12.61□□□□□ -0.39
SMPD4P1-203ENST00000443839 SALL2Q9Y467 1007 aaPredicted RBP12.61□□□□□ -0.39
SMPD4P1-203ENST00000443839 U2SURPO15042 1029 aaKnown RBP12.61□□□□□ -0.39
SMPD4P1-203ENST00000443839 ZBTB22O15209 634 aa12.6□□□□□ -0.39
SMPD4P1-203ENST00000443839 KRT28Q7Z3Y7 464 aa12.6□□□□□ -0.39
SMPD4P1-203ENST00000443839 LMOD2Q6P5Q4 547 aa12.59□□□□□ -0.39
SMPD4P1-203ENST00000443839 SLAIN2Q9P270 581 aa12.59□□□□□ -0.39
SMPD4P1-203ENST00000443839 NPHP3Q7Z494 1330 aa12.59□□□□□ -0.39
SMPD4P1-203ENST00000443839 USP54Q70EL1 1684 aa12.58□□□□□ -0.4
SMPD4P1-203ENST00000443839 MYT1Q01538 1121 aa12.58□□□□□ -0.4
SMPD4P1-203ENST00000443839 MARF1Q9Y4F3 1742 aaKnown RBP12.57□□□□□ -0.4
SMPD4P1-203ENST00000443839 DDX17Q92841 729 aaKnown RBP12.57□□□□□ -0.4
SMPD4P1-203ENST00000443839 MAP3K19Q56UN5 1328 aa12.57□□□□□ -0.4
SMPD4P1-203ENST00000443839 TRPM3Q9HCF6 1732 aaPredicted RBP12.57□□□□□ -0.4
SMPD4P1-203ENST00000443839 APAF1O14727 1248 aa12.56□□□□□ -0.4
SMPD4P1-203ENST00000443839 BRINP3Q76B58 766 aa12.56□□□□□ -0.4
SMPD4P1-203ENST00000443839 RUNDC1Q96C34 613 aa12.56□□□□□ -0.4
SMPD4P1-203ENST00000443839 AMPHP49418 695 aa12.56□□□□□ -0.4
SMPD4P1-203ENST00000443839 SBNO1A3KN83 1393 aa12.55□□□□□ -0.4
SMPD4P1-203ENST00000443839 FLT4P35916 1363 aa12.55□□□□□ -0.4
SMPD4P1-203ENST00000443839 PLEKHG5O94827 1062 aa12.55□□□□□ -0.4
SMPD4P1-203ENST00000443839 IL13P35225 146 aa12.55□□□□□ -0.4
SMPD4P1-203ENST00000443839 KCNH5Q8NCM2 988 aa12.55□□□□□ -0.4
SMPD4P1-203ENST00000443839 PEAK1Q9H792 1746 aa12.55□□□□□ -0.4
SMPD4P1-203ENST00000443839 HSP90AB2PQ58FF8 381 aa12.54□□□□□ -0.4
SMPD4P1-203ENST00000443839 CNKSR2Q8WXI2 1034 aa12.54□□□□□ -0.4
SMPD4P1-203ENST00000443839 PNNQ9H307 717 aaKnown RBP12.54□□□□□ -0.4
SMPD4P1-203ENST00000443839 MAPK8IP3Q9UPT6 1336 aa12.53□□□□□ -0.4
SMPD4P1-203ENST00000443839 PDE3BQ13370 1112 aa12.53□□□□□ -0.4
SMPD4P1-203ENST00000443839 LTBP4Q8N2S1 1624 aa12.53□□□□□ -0.4
SMPD4P1-203ENST00000443839 TCP11L2Q8N4U5 519 aa12.53□□□□□ -0.4
SMPD4P1-203ENST00000443839 NGEFQ8N5V2 710 aa12.53□□□□□ -0.4
SMPD4P1-203ENST00000443839 ALS2Q96Q42 1657 aa12.53□□□□□ -0.4
SMPD4P1-203ENST00000443839 PXDNQ92626 1479 aa12.53□□□□□ -0.4
SMPD4P1-203ENST00000443839 KIF24Q5T7B8 1368 aa12.52□□□□□ -0.4
SMPD4P1-203ENST00000443839 FCHSD2O94868 740 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms