RNA–Protein interactions for RNA: ENST00000443790.1

EDEM1-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-203ENST00000443790 ONECUT3O60422 494 aaPredicted RBP28.93■■■□□ 2.22
EDEM1-203ENST00000443790 SRCAPQ6ZRS2 3230 aa28.93■■■□□ 2.22
EDEM1-203ENST00000443790 NUDT16Q96DE0 195 aaKnown RBP28.91■■■□□ 2.22
EDEM1-203ENST00000443790 ZRANB1Q9UGI0 708 aa28.91■■■□□ 2.22
EDEM1-203ENST00000443790 BTG4Q9NY30 223 aa28.9■■■□□ 2.22
EDEM1-203ENST00000443790 PAK3O75914 559 aaPredicted RBP28.89■■■□□ 2.22
EDEM1-203ENST00000443790 TOPAZ1Q8N9V7 1692 aa28.88■■■□□ 2.21
EDEM1-203ENST00000443790 KRT27Q7Z3Y8 459 aa28.86■■■□□ 2.21
EDEM1-203ENST00000443790 CDK19Q9BWU1 502 aa28.86■■■□□ 2.21
EDEM1-203ENST00000443790 FAM98CQ17RN3 349 aaKnown RBP28.83■■■□□ 2.21
EDEM1-203ENST00000443790 POLR3AO14802 1390 aaPredicted RBP28.83■■■□□ 2.21
EDEM1-203ENST00000443790 PHRF1Q9P1Y6 1649 aaKnown RBP28.83■■■□□ 2.21
EDEM1-203ENST00000443790 A0A0G2JS52 829 aa28.82■■■□□ 2.2
EDEM1-203ENST00000443790 MYT1Q01538 1121 aa28.82■■■□□ 2.2
EDEM1-203ENST00000443790 PRDM11Q9NQV5 511 aa28.82■■■□□ 2.2
EDEM1-203ENST00000443790 SF3B2Q13435 895 aaKnown RBP28.81■■■□□ 2.2
EDEM1-203ENST00000443790 NBPF1Q3BBV0 1214 aa28.81■■■□□ 2.2
EDEM1-203ENST00000443790 DEFB132Q7Z7B7 95 aa28.81■■■□□ 2.2
EDEM1-203ENST00000443790 ACEP12821 1306 aa28.79■■■□□ 2.2
EDEM1-203ENST00000443790 SPATA31A5Q5VU36 1347 aa28.79■■■□□ 2.2
EDEM1-203ENST00000443790 SPATA31A7Q8IWB4 1347 aa28.79■■■□□ 2.2
EDEM1-203ENST00000443790 CCDC61Q9Y6R9 512 aa28.79■■■□□ 2.2
EDEM1-203ENST00000443790 KIAA0232Q92628 1395 aa28.78■■■□□ 2.2
EDEM1-203ENST00000443790 THSD7AQ9UPZ6 1657 aa28.77■■■□□ 2.2
EDEM1-203ENST00000443790 PLEKHG3A1L390 1219 aa28.76■■■□□ 2.19
EDEM1-203ENST00000443790 NBPF8Q3BBV2 869 aa28.75■■■□□ 2.19
EDEM1-203ENST00000443790 CENPJQ9HC77 1338 aaPredicted RBP28.73■■■□□ 2.19
EDEM1-203ENST00000443790 NUTM2GQ5VZR2 741 aa28.73■■■□□ 2.19
EDEM1-203ENST00000443790 NRKQ7Z2Y5 1582 aa28.72■■■□□ 2.19
EDEM1-203ENST00000443790 CHRNA2Q15822 529 aa28.72■■■□□ 2.19
EDEM1-203ENST00000443790 QRICH2Q9H0J4 1663 aa28.7■■■□□ 2.19
EDEM1-203ENST00000443790 PPIP5K1Q6PFW1 1433 aa28.7■■■□□ 2.19
EDEM1-203ENST00000443790 ZC3H6P61129 1189 aaKnown RBP28.7■■■□□ 2.18
EDEM1-203ENST00000443790 SPATA31A1Q5TZJ5 1347 aa28.69■■■□□ 2.18
EDEM1-203ENST00000443790 SRPK2P78362 688 aaKnown RBP28.69■■■□□ 2.18
EDEM1-203ENST00000443790 BAG6P46379 1132 aa28.68■■■□□ 2.18
EDEM1-203ENST00000443790 RGPD1P0DJD0 1748 aa28.67■■■□□ 2.18
EDEM1-203ENST00000443790 ABTB2Q8N961 1025 aa28.67■■■□□ 2.18
EDEM1-203ENST00000443790 STRN4Q9NRL3 753 aa28.67■■■□□ 2.18
EDEM1-203ENST00000443790 USP19O94966 1318 aa28.67■■■□□ 2.18
EDEM1-203ENST00000443790 FAM182BQ5T319 152 aa28.65■■■□□ 2.18
EDEM1-203ENST00000443790 L3MBTL2Q969R5 705 aa28.65■■■□□ 2.18
EDEM1-203ENST00000443790 CABP2Q9NPB3 220 aa28.65■■■□□ 2.18
EDEM1-203ENST00000443790 CPDO75976 1380 aa28.64■■■□□ 2.18
EDEM1-203ENST00000443790 SSH2Q76I76 1423 aa28.64■■■□□ 2.18
EDEM1-203ENST00000443790 LMO7Q8WWI1 1683 aa28.64■■■□□ 2.17
EDEM1-203ENST00000443790 TRPM1Q7Z4N2 1603 aa28.62■■■□□ 2.17
EDEM1-203ENST00000443790 CAMTA1Q9Y6Y1 1673 aa28.62■■■□□ 2.17
EDEM1-203ENST00000443790 BRD4O60885 1362 aaPredicted RBP28.62■■■□□ 2.17
EDEM1-203ENST00000443790 TNS1Q9HBL0 1735 aaKnown RBP28.6■■■□□ 2.17
EDEM1-203ENST00000443790 NLRP13Q86W25 1043 aa28.6■■■□□ 2.17
EDEM1-203ENST00000443790 DISP2A7MBM2 1401 aa28.59■■■□□ 2.17
EDEM1-203ENST00000443790 EVA1CP58658 441 aa28.58■■■□□ 2.17
EDEM1-203ENST00000443790 USP6P35125 1406 aa28.58■■■□□ 2.17
EDEM1-203ENST00000443790 SIN3AQ96ST3 1273 aa28.57■■■□□ 2.16
EDEM1-203ENST00000443790 USP35Q9P2H5 1018 aa28.57■■■□□ 2.16
EDEM1-203ENST00000443790 GCP02774 474 aa28.56■■■□□ 2.16
EDEM1-203ENST00000443790 EN1Q05925 392 aaPredicted RBP28.56■■■□□ 2.16
EDEM1-203ENST00000443790 BARGINQ6ZT62 677 aa28.56■■■□□ 2.16
EDEM1-203ENST00000443790 CABP1Q9NZU7 370 aa28.56■■■□□ 2.16
EDEM1-203ENST00000443790 LRP5O75197 1615 aa28.55■■■□□ 2.16
EDEM1-203ENST00000443790 LARP1Q6PKG0 1096 aaKnown RBP28.55■■■□□ 2.16
EDEM1-203ENST00000443790 EVC2Q86UK5 1308 aa28.53■■■□□ 2.16
EDEM1-203ENST00000443790 FAM196AQ6ZSG2 479 aa28.53■■■□□ 2.16
EDEM1-203ENST00000443790 SLIT3O75094 1523 aa28.53■■■□□ 2.16
EDEM1-203ENST00000443790 COL5A2P05997 1499 aaPredicted RBP28.53■■■□□ 2.16
EDEM1-203ENST00000443790 ROCK2O75116 1388 aaKnown RBP28.52■■■□□ 2.16
EDEM1-203ENST00000443790 PSDA5PKW4 1024 aaPredicted RBP28.52■■■□□ 2.16
EDEM1-203ENST00000443790 TCP11L2Q8N4U5 519 aa28.51■■■□□ 2.15
EDEM1-203ENST00000443790 PIK3C2AO00443 1686 aa28.5■■■□□ 2.15
EDEM1-203ENST00000443790 TRIM37O94972 964 aa28.49■■■□□ 2.15
EDEM1-203ENST00000443790 NLRP6P59044 892 aa28.49■■■□□ 2.15
EDEM1-203ENST00000443790 NEUROD1Q13562 356 aa28.49■■■□□ 2.15
EDEM1-203ENST00000443790 PDE3BQ13370 1112 aa28.48■■■□□ 2.15
EDEM1-203ENST00000443790 THRAP3Q9Y2W1 955 aaKnown RBP28.48■■■□□ 2.15
EDEM1-203ENST00000443790 EZH2Q15910 746 aaKnown RBP28.46■■■□□ 2.15
EDEM1-203ENST00000443790 AATKQ6ZMQ8 1374 aa28.46■■■□□ 2.15
EDEM1-203ENST00000443790 PARP4Q9UKK3 1724 aaKnown RBP28.46■■■□□ 2.15
EDEM1-203ENST00000443790 CRB1P82279 1406 aa28.45■■■□□ 2.15
EDEM1-203ENST00000443790 CAMKK2Q96RR4 588 aa28.44■■■□□ 2.14
EDEM1-203ENST00000443790 AKAP12Q02952 1782 aa28.44■■■□□ 2.14
EDEM1-203ENST00000443790 ZBTB7CA1YPR0 619 aa28.43■■■□□ 2.14
EDEM1-203ENST00000443790 PARD3Q8TEW0 1356 aa28.42■■■□□ 2.14
EDEM1-203ENST00000443790 APBA3O96018 575 aa28.41■■■□□ 2.14
EDEM1-203ENST00000443790 R3HDM1Q15032 1099 aaKnown RBP28.41■■■□□ 2.14
EDEM1-203ENST00000443790 COL18A1P39060 1754 aa28.41■■■□□ 2.14
EDEM1-203ENST00000443790 ZNF692Q9BU19 519 aaPredicted RBP28.4■■■□□ 2.14
EDEM1-203ENST00000443790 TTC21BQ7Z4L5 1316 aa28.4■■■□□ 2.14
EDEM1-203ENST00000443790 RREB1Q92766 1687 aa28.38■■■□□ 2.13
EDEM1-203ENST00000443790 CPSF1Q10570 1443 aaKnown RBP28.38■■■□□ 2.13
EDEM1-203ENST00000443790 TTC21AQ8NDW8 1320 aa28.37■■■□□ 2.13
EDEM1-203ENST00000443790 SBNO2Q9Y2G9 1366 aa28.37■■■□□ 2.13
EDEM1-203ENST00000443790 LRRC37A3O60309 1634 aa28.36■■■□□ 2.13
EDEM1-203ENST00000443790 TRIM26Q12899 539 aaPredicted RBP28.35■■■□□ 2.13
EDEM1-203ENST00000443790 TOM1L2Q6ZVM7 507 aa28.34■■■□□ 2.13
EDEM1-203ENST00000443790 NUP188Q5SRE5 1749 aa28.34■■■□□ 2.13
EDEM1-203ENST00000443790 PEAK1Q9H792 1746 aa28.34■■■□□ 2.13
EDEM1-203ENST00000443790 OVOS2A0A0G2JMS6 1433 aa28.34■■■□□ 2.13
EDEM1-203ENST00000443790 OVOS2A0A0J9YW53 1432 aa28.34■■■□□ 2.13
EDEM1-203ENST00000443790 OVOS2Q6IE36 1432 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms