RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 PHRF1Q9P1Y6 1649 aaKnown RBP14.59□□□□□ -0.07
HLA-DQB1-206ENST00000443574 MON2Q7Z3U7 1717 aa14.58□□□□□ -0.07
HLA-DQB1-206ENST00000443574 HAP1P54257 671 aaPredicted RBP14.57□□□□□ -0.08
HLA-DQB1-206ENST00000443574 LMOD2Q6P5Q4 547 aa14.57□□□□□ -0.08
HLA-DQB1-206ENST00000443574 CABP2Q9NPB3 220 aa14.57□□□□□ -0.08
HLA-DQB1-206ENST00000443574 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.57□□□□□ -0.08
HLA-DQB1-206ENST00000443574 BRD4O60885 1362 aaPredicted RBP14.57□□□□□ -0.08
HLA-DQB1-206ENST00000443574 PLCH1Q4KWH8 1693 aa14.56□□□□□ -0.08
HLA-DQB1-206ENST00000443574 NWD2Q9ULI1 1742 aa14.56□□□□□ -0.08
HLA-DQB1-206ENST00000443574 NRKQ7Z2Y5 1582 aa14.56□□□□□ -0.08
HLA-DQB1-206ENST00000443574 PLEKHG3A1L390 1219 aa14.55□□□□□ -0.08
HLA-DQB1-206ENST00000443574 ZNF772Q68DY9 489 aaPredicted RBP14.55□□□□□ -0.08
HLA-DQB1-206ENST00000443574 ACEP12821 1306 aa14.55□□□□□ -0.08
HLA-DQB1-206ENST00000443574 PAK3O75914 559 aaPredicted RBP14.54□□□□□ -0.08
HLA-DQB1-206ENST00000443574 ADAMTS2O95450 1211 aa14.53□□□□□ -0.08
HLA-DQB1-206ENST00000443574 C8orf37Q96NL8 207 aa14.53□□□□□ -0.08
HLA-DQB1-206ENST00000443574 COL14A1Q05707 1796 aaKnown RBP14.52□□□□□ -0.08
HLA-DQB1-206ENST00000443574 USP6P35125 1406 aa14.52□□□□□ -0.08
HLA-DQB1-206ENST00000443574 NINLQ9Y2I6 1382 aa14.52□□□□□ -0.08
HLA-DQB1-206ENST00000443574 ST20-MTHFSA0A0A6YYL1 179 aa14.52□□□□□ -0.09
HLA-DQB1-206ENST00000443574 PIK3C2AO00443 1686 aa14.52□□□□□ -0.09
HLA-DQB1-206ENST00000443574 AFF2P51816 1311 aa14.51□□□□□ -0.09
HLA-DQB1-206ENST00000443574 TMF1P82094 1093 aa14.5□□□□□ -0.09
HLA-DQB1-206ENST00000443574 CDCA8Q53HL2 280 aa14.5□□□□□ -0.09
HLA-DQB1-206ENST00000443574 NGLY1Q96IV0 654 aa14.5□□□□□ -0.09
HLA-DQB1-206ENST00000443574 PUS7Q96PZ0 661 aaKnown RBP14.5□□□□□ -0.09
HLA-DQB1-206ENST00000443574 CABP1Q9NZU7 370 aa14.5□□□□□ -0.09
HLA-DQB1-206ENST00000443574 USP54Q70EL1 1684 aa14.49□□□□□ -0.09
HLA-DQB1-206ENST00000443574 MYOM1P52179 1685 aa14.49□□□□□ -0.09
HLA-DQB1-206ENST00000443574 TESK2Q96S53 571 aa14.48□□□□□ -0.09
HLA-DQB1-206ENST00000443574 ZNF692Q9BU19 519 aaPredicted RBP14.48□□□□□ -0.09
HLA-DQB1-206ENST00000443574 NRAPQ86VF7 1730 aa14.48□□□□□ -0.09
HLA-DQB1-206ENST00000443574 KTN1Q86UP2 1357 aaKnown RBP14.47□□□□□ -0.09
HLA-DQB1-206ENST00000443574 PLEKHG5O94827 1062 aa14.47□□□□□ -0.09
HLA-DQB1-206ENST00000443574 HDGFL2Q7Z4V5 671 aaPredicted RBP14.47□□□□□ -0.09
HLA-DQB1-206ENST00000443574 ABTB2Q8N961 1025 aa14.47□□□□□ -0.09
HLA-DQB1-206ENST00000443574 TMC1Q8TDI8 760 aa14.47□□□□□ -0.09
HLA-DQB1-206ENST00000443574 RGS17Q9UGC6 210 aaPredicted RBP14.47□□□□□ -0.09
HLA-DQB1-206ENST00000443574 CPSF1Q10570 1443 aaKnown RBP14.47□□□□□ -0.09
HLA-DQB1-206ENST00000443574 KIF20BQ96Q89 1820 aa14.46□□□□□ -0.09
HLA-DQB1-206ENST00000443574 EIF4G2P78344 907 aaKnown RBP eCLIP14.46□□□□□ -0.09
HLA-DQB1-206ENST00000443574 TERF2IPQ9NYB0 399 aa14.46□□□□□ -0.09
HLA-DQB1-206ENST00000443574 TTC21AQ8NDW8 1320 aa14.45□□□□□ -0.1
HLA-DQB1-206ENST00000443574 NLRP13Q86W25 1043 aa14.45□□□□□ -0.1
HLA-DQB1-206ENST00000443574 CABLES1Q8TDN4 633 aa14.45□□□□□ -0.1
HLA-DQB1-206ENST00000443574 USP21Q9UK80 565 aa14.45□□□□□ -0.1
HLA-DQB1-206ENST00000443574 SLIT3O75094 1523 aa14.45□□□□□ -0.1
HLA-DQB1-206ENST00000443574 SLIT2O94813 1529 aa14.45□□□□□ -0.1
HLA-DQB1-206ENST00000443574 CDK12Q9NYV4 1490 aaPredicted RBP14.44□□□□□ -0.1
HLA-DQB1-206ENST00000443574 EDC4Q6P2E9 1401 aaKnown RBP14.44□□□□□ -0.1
HLA-DQB1-206ENST00000443574 ILDR2Q71H61 639 aa14.44□□□□□ -0.1
HLA-DQB1-206ENST00000443574 FNBP4Q8N3X1 1017 aaPredicted RBP14.44□□□□□ -0.1
HLA-DQB1-206ENST00000443574 CD163L1Q9NR16 1453 aa14.44□□□□□ -0.1
HLA-DQB1-206ENST00000443574 SSH2Q76I76 1423 aa14.43□□□□□ -0.1
HLA-DQB1-206ENST00000443574 POTEAQ6S8J7 498 aa14.43□□□□□ -0.1
HLA-DQB1-206ENST00000443574 TRPC5Q9UL62 973 aaPredicted RBP14.43□□□□□ -0.1
HLA-DQB1-206ENST00000443574 A0A1W2PP64 1363 aa14.43□□□□□ -0.1
HLA-DQB1-206ENST00000443574 USP19O94966 1318 aa14.42□□□□□ -0.1
HLA-DQB1-206ENST00000443574 LTN1O94822 1766 aa14.42□□□□□ -0.1
HLA-DQB1-206ENST00000443574 PRDM11Q9NQV5 511 aa14.42□□□□□ -0.1
HLA-DQB1-206ENST00000443574 TTC21BQ7Z4L5 1316 aa14.41□□□□□ -0.1
HLA-DQB1-206ENST00000443574 ATRNO75882 1429 aa14.41□□□□□ -0.1
HLA-DQB1-206ENST00000443574 RXRBP28702 533 aa14.41□□□□□ -0.1
HLA-DQB1-206ENST00000443574 NUTM2GQ5VZR2 741 aa14.41□□□□□ -0.1
HLA-DQB1-206ENST00000443574 ANKRD36BQ8N2N9 1353 aa14.41□□□□□ -0.1
HLA-DQB1-206ENST00000443574 BCL9LQ86UU0 1499 aa14.41□□□□□ -0.1
HLA-DQB1-206ENST00000443574 LMO7Q8WWI1 1683 aa14.4□□□□□ -0.1
HLA-DQB1-206ENST00000443574 NLRP6P59044 892 aa14.4□□□□□ -0.1
HLA-DQB1-206ENST00000443574 RBM6P78332 1123 aaKnown RBP14.4□□□□□ -0.1
HLA-DQB1-206ENST00000443574 QTRT2Q9H974 415 aaKnown RBP14.4□□□□□ -0.1
HLA-DQB1-206ENST00000443574 CPDO75976 1380 aa14.39□□□□□ -0.11
HLA-DQB1-206ENST00000443574 KIAA0232Q92628 1395 aa14.39□□□□□ -0.11
HLA-DQB1-206ENST00000443574 UNC5CLQ8IV45 518 aa14.39□□□□□ -0.11
HLA-DQB1-206ENST00000443574 SLC12A5Q9H2X9 1139 aa14.39□□□□□ -0.11
HLA-DQB1-206ENST00000443574 ABCC6O95255 1503 aa14.39□□□□□ -0.11
HLA-DQB1-206ENST00000443574 GLI3P10071 1580 aa14.38□□□□□ -0.11
HLA-DQB1-206ENST00000443574 SOCS7O14512 581 aa14.37□□□□□ -0.11
HLA-DQB1-206ENST00000443574 HSPA5P11021 654 aaKnown RBP14.37□□□□□ -0.11
HLA-DQB1-206ENST00000443574 KCNH5Q8NCM2 988 aa14.37□□□□□ -0.11
HLA-DQB1-206ENST00000443574 ANKRD26Q9UPS8 1709 aa14.37□□□□□ -0.11
HLA-DQB1-206ENST00000443574 NFAT5O94916 1531 aa14.36□□□□□ -0.11
HLA-DQB1-206ENST00000443574 RGS12O14924 1447 aa14.36□□□□□ -0.11
HLA-DQB1-206ENST00000443574 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.36□□□□□ -0.11
HLA-DQB1-206ENST00000443574 BTG4Q9NY30 223 aa14.36□□□□□ -0.11
HLA-DQB1-206ENST00000443574 RGPD5Q99666 1765 aa14.36□□□□□ -0.11
HLA-DQB1-206ENST00000443574 USP31Q70CQ4 1352 aa14.35□□□□□ -0.11
HLA-DQB1-206ENST00000443574 GCP02774 474 aa14.35□□□□□ -0.11
HLA-DQB1-206ENST00000443574 ZC3H6P61129 1189 aaKnown RBP14.35□□□□□ -0.11
HLA-DQB1-206ENST00000443574 CCDC9Q9Y3X0 531 aaKnown RBP14.35□□□□□ -0.11
HLA-DQB1-206ENST00000443574 WNK3Q9BYP7 1800 aa14.34□□□□□ -0.11
HLA-DQB1-206ENST00000443574 OVOS2A0A0J9YW53 1432 aa14.34□□□□□ -0.11
HLA-DQB1-206ENST00000443574 OVOS2Q6IE36 1432 aa14.34□□□□□ -0.11
HLA-DQB1-206ENST00000443574 FAM208AQ9UK61 1670 aaKnown RBP14.34□□□□□ -0.11
HLA-DQB1-206ENST00000443574 FAM83GA6ND36 823 aa14.34□□□□□ -0.11
HLA-DQB1-206ENST00000443574 VPS72Q15906 364 aa14.34□□□□□ -0.11
HLA-DQB1-206ENST00000443574 POLR3GLQ9BT43 218 aa14.34□□□□□ -0.11
HLA-DQB1-206ENST00000443574 COL18A1P39060 1754 aa14.34□□□□□ -0.11
HLA-DQB1-206ENST00000443574 BRWD3Q6RI45 1802 aa14.34□□□□□ -0.11
HLA-DQB1-206ENST00000443574 GJD4Q96KN9 370 aaPredicted RBP14.33□□□□□ -0.12
HLA-DQB1-206ENST00000443574 ZBTB7CA1YPR0 619 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms