RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 DISP3Q9P2K9 1392 aa27.28■■□□□ 1.96
CTDSPL-206ENST00000443503 VPS37CA5D8V6 355 aaPredicted RBP27.28■■□□□ 1.96
CTDSPL-206ENST00000443503 NFE2L2Q16236 605 aa27.27■■□□□ 1.96
CTDSPL-206ENST00000443503 NUP153P49790 1475 aaKnown RBP27.27■■□□□ 1.96
CTDSPL-206ENST00000443503 GNAI2P04899 355 aa27.27■■□□□ 1.96
CTDSPL-206ENST00000443503 NEUROD6Q96NK8 337 aa27.27■■□□□ 1.96
CTDSPL-206ENST00000443503 ATP10BO94823 1461 aa27.26■■□□□ 1.95
CTDSPL-206ENST00000443503 SMC3Q9UQE7 1217 aa27.26■■□□□ 1.95
CTDSPL-206ENST00000443503 TMX4Q9H1E5 349 aaPredicted RBP27.25■■□□□ 1.95
CTDSPL-206ENST00000443503 RASSF8Q8NHQ8 419 aa27.25■■□□□ 1.95
CTDSPL-206ENST00000443503 APPP05067 770 aa27.25■■□□□ 1.95
CTDSPL-206ENST00000443503 TMEM57Q8N5G2 664 aa27.24■■□□□ 1.95
CTDSPL-206ENST00000443503 RARSP54136 660 aaKnown RBP27.23■■□□□ 1.95
CTDSPL-206ENST00000443503 CHMP4CQ96CF2 233 aa27.23■■□□□ 1.95
CTDSPL-206ENST00000443503 CPLX2Q6PUV4 134 aaKnown RBP27.23■■□□□ 1.95
CTDSPL-206ENST00000443503 NEK4P51957 841 aa27.23■■□□□ 1.95
CTDSPL-206ENST00000443503 ZNF530Q6P9A1 599 aaPredicted RBP27.22■■□□□ 1.95
CTDSPL-206ENST00000443503 SSH1Q8WYL5 1049 aa27.22■■□□□ 1.95
CTDSPL-206ENST00000443503 SCAF11Q99590 1463 aaKnown RBP27.22■■□□□ 1.95
CTDSPL-206ENST00000443503 FANCAO15360 1455 aa27.21■■□□□ 1.95
CTDSPL-206ENST00000443503 NOS1P29475 1434 aa27.21■■□□□ 1.95
CTDSPL-206ENST00000443503 DUSP27Q5VZP5 1158 aa27.2■■□□□ 1.95
CTDSPL-206ENST00000443503 ZNF428Q96B54 188 aa27.2■■□□□ 1.95
CTDSPL-206ENST00000443503 CHD1LQ86WJ1 897 aa27.2■■□□□ 1.94
CTDSPL-206ENST00000443503 CPLX1O14810 134 aa27.2■■□□□ 1.94
CTDSPL-206ENST00000443503 NME9Q86XW9 330 aa27.2■■□□□ 1.94
CTDSPL-206ENST00000443503 CCT4P50991 539 aaKnown RBP27.19■■□□□ 1.94
CTDSPL-206ENST00000443503 DCTN1Q14203 1278 aa27.19■■□□□ 1.94
CTDSPL-206ENST00000443503 CNTROBQ8N137 903 aa27.18■■□□□ 1.94
CTDSPL-206ENST00000443503 BECN2A8MW95 431 aa27.18■■□□□ 1.94
CTDSPL-206ENST00000443503 DHX29Q7Z478 1369 aaKnown RBP27.18■■□□□ 1.94
CTDSPL-206ENST00000443503 G3V3G9 751 aa27.17■■□□□ 1.94
CTDSPL-206ENST00000443503 DCAF8Q5TAQ9 597 aa27.17■■□□□ 1.94
CTDSPL-206ENST00000443503 C14orf93Q9H972 538 aaKnown RBP27.17■■□□□ 1.94
CTDSPL-206ENST00000443503 EMILIN1Q9Y6C2 1016 aa27.17■■□□□ 1.94
CTDSPL-206ENST00000443503 CREBRFQ8IUR6 639 aa27.17■■□□□ 1.94
CTDSPL-206ENST00000443503 GOLGA6L19H0YKK7 550 aa27.17■■□□□ 1.94
CTDSPL-206ENST00000443503 SYNE3Q6ZMZ3 975 aa27.17■■□□□ 1.94
CTDSPL-206ENST00000443503 FSD1Q9BTV5 496 aa27.17■■□□□ 1.94
CTDSPL-206ENST00000443503 RAPGEF6Q8TEU7 1601 aa27.17■■□□□ 1.94
CTDSPL-206ENST00000443503 SRCIN1Q9C0H9 1055 aa27.16■■□□□ 1.94
CTDSPL-206ENST00000443503 TRDNQ13061 729 aa27.15■■□□□ 1.94
CTDSPL-206ENST00000443503 BICD2Q8TD16 824 aa27.15■■□□□ 1.94
CTDSPL-206ENST00000443503 TRAK2O60296 914 aa27.15■■□□□ 1.94
CTDSPL-206ENST00000443503 AKAP17AQ02040 695 aaKnown RBP27.15■■□□□ 1.94
CTDSPL-206ENST00000443503 RABEP1Q15276 862 aa27.15■■□□□ 1.94
CTDSPL-206ENST00000443503 ANKLE2Q86XL3 938 aa27.15■■□□□ 1.94
CTDSPL-206ENST00000443503 MIS18AQ9NYP9 233 aa27.15■■□□□ 1.94
CTDSPL-206ENST00000443503 MCM10Q7L590 875 aa27.14■■□□□ 1.94
CTDSPL-206ENST00000443503 AMER1Q5JTC6 1135 aaPredicted RBP27.13■■□□□ 1.93
CTDSPL-206ENST00000443503 FAM135AQ9P2D6 1515 aa27.13■■□□□ 1.93
CTDSPL-206ENST00000443503 XPCQ01831 940 aaPredicted RBP27.13■■□□□ 1.93
CTDSPL-206ENST00000443503 NKTRP30414 1462 aaKnown RBP27.13■■□□□ 1.93
CTDSPL-206ENST00000443503 TATP17735 454 aaPredicted RBP27.12■■□□□ 1.93
CTDSPL-206ENST00000443503 WASHC4Q2M389 1173 aa27.12■■□□□ 1.93
CTDSPL-206ENST00000443503 LRRCC1Q9C099 1032 aa27.12■■□□□ 1.93
CTDSPL-206ENST00000443503 CLSTN1O94985 981 aa27.11■■□□□ 1.93
CTDSPL-206ENST00000443503 FOSBP53539 338 aa27.1■■□□□ 1.93
CTDSPL-206ENST00000443503 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.1■■□□□ 1.93
CTDSPL-206ENST00000443503 WASLO00401 505 aaPredicted RBP27.08■■□□□ 1.93
CTDSPL-206ENST00000443503 VPS37DQ86XT2 251 aa27.08■■□□□ 1.93
CTDSPL-206ENST00000443503 RPAP2Q8IXW5 612 aaPredicted RBP27.07■■□□□ 1.92
CTDSPL-206ENST00000443503 STRN4Q9NRL3 753 aa27.07■■□□□ 1.92
CTDSPL-206ENST00000443503 RALGAPBQ86X10 1494 aa27.07■■□□□ 1.92
CTDSPL-206ENST00000443503 TRIM29Q14134 588 aa27.07■■□□□ 1.92
CTDSPL-206ENST00000443503 PLCH2O75038 1416 aa27.07■■□□□ 1.92
CTDSPL-206ENST00000443503 ABCC11Q96J66 1382 aa27.06■■□□□ 1.92
CTDSPL-206ENST00000443503 RALYLQ86SE5 291 aaKnown RBP27.06■■□□□ 1.92
CTDSPL-206ENST00000443503 DNAJC2Q99543 621 aaKnown RBP27.06■■□□□ 1.92
CTDSPL-206ENST00000443503 LRPPRCP42704 1394 aaKnown RBP27.06■■□□□ 1.92
CTDSPL-206ENST00000443503 IL1RAPL2Q9NP60 686 aa27.05■■□□□ 1.92
CTDSPL-206ENST00000443503 SRGAP3O43295 1099 aa27.05■■□□□ 1.92
CTDSPL-206ENST00000443503 KDM5BQ9UGL1 1544 aa27.05■■□□□ 1.92
CTDSPL-206ENST00000443503 DENND4BO75064 1496 aaPredicted RBP27.05■■□□□ 1.92
CTDSPL-206ENST00000443503 SIL1Q9H173 461 aa27.05■■□□□ 1.92
CTDSPL-206ENST00000443503 TCOF1Q13428 1488 aaKnown RBP27.04■■□□□ 1.92
CTDSPL-206ENST00000443503 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.04■■□□□ 1.92
CTDSPL-206ENST00000443503 MSH5O43196 834 aa27.04■■□□□ 1.92
CTDSPL-206ENST00000443503 MRE11P49959 708 aa27.04■■□□□ 1.92
CTDSPL-206ENST00000443503 EXOC6BQ9Y2D4 811 aa27.04■■□□□ 1.92
CTDSPL-206ENST00000443503 MCM2P49736 904 aa27.04■■□□□ 1.92
CTDSPL-206ENST00000443503 ZC3H6P61129 1189 aaKnown RBP27.04■■□□□ 1.92
CTDSPL-206ENST00000443503 NFXL1Q6ZNB6 911 aa27.04■■□□□ 1.92
CTDSPL-206ENST00000443503 CEBPAP49715 358 aaPredicted RBP27.03■■□□□ 1.92
CTDSPL-206ENST00000443503 CAVIN1Q6NZI2 390 aaKnown RBP27.03■■□□□ 1.92
CTDSPL-206ENST00000443503 RNF214Q8ND24 703 aa27.03■■□□□ 1.92
CTDSPL-206ENST00000443503 IFT57Q9NWB7 429 aa27.03■■□□□ 1.92
CTDSPL-206ENST00000443503 POGZQ7Z3K3 1410 aa27.03■■□□□ 1.92
CTDSPL-206ENST00000443503 PSMA5P28066 241 aa27.03■■□□□ 1.92
CTDSPL-206ENST00000443503 ERC1Q8IUD2 1116 aa27.03■■□□□ 1.92
CTDSPL-206ENST00000443503 PRAG1Q86YV5 1406 aa27.02■■□□□ 1.92
CTDSPL-206ENST00000443503 MYL6BP14649 208 aa27.02■■□□□ 1.92
CTDSPL-206ENST00000443503 GNAT3A8MTJ3 354 aa27.02■■□□□ 1.92
CTDSPL-206ENST00000443503 TRIM27P14373 513 aa27.02■■□□□ 1.92
CTDSPL-206ENST00000443503 SYCP2Q9BX26 1530 aa27.02■■□□□ 1.92
CTDSPL-206ENST00000443503 MARCH6O60337 910 aa27.02■■□□□ 1.92
CTDSPL-206ENST00000443503 ALDH1L2Q3SY69 923 aa27.02■■□□□ 1.92
CTDSPL-206ENST00000443503 CCDC27Q2M243 656 aa27.01■■□□□ 1.91
CTDSPL-206ENST00000443503 RBM42Q9BTD8 480 aaKnown RBP27.01■■□□□ 1.91
CTDSPL-206ENST00000443503 FAM177BA6PVY3 158 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms