RNA–Protein interactions for RNA: ENST00000443289.5

ATG4C-205, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 2

Gene ATG4C, Length 603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-205ENST00000443289 ALS2Q96Q42 1657 aa23.26■■□□□ 1.31
ATG4C-205ENST00000443289 CABP2Q9NPB3 220 aa23.26■■□□□ 1.31
ATG4C-205ENST00000443289 TONSLQ96HA7 1378 aa23.25■■□□□ 1.31
ATG4C-205ENST00000443289 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.25■■□□□ 1.31
ATG4C-205ENST00000443289 EVC2Q86UK5 1308 aa23.24■■□□□ 1.31
ATG4C-205ENST00000443289 TOPAZ1Q8N9V7 1692 aa23.23■■□□□ 1.31
ATG4C-205ENST00000443289 ABCA3Q99758 1704 aa23.23■■□□□ 1.31
ATG4C-205ENST00000443289 VPS72Q15906 364 aa23.23■■□□□ 1.31
ATG4C-205ENST00000443289 QRICH2Q9H0J4 1663 aa23.22■■□□□ 1.31
ATG4C-205ENST00000443289 PPIP5K1Q6PFW1 1433 aa23.22■■□□□ 1.31
ATG4C-205ENST00000443289 ATAD2Q6PL18 1390 aa23.21■■□□□ 1.31
ATG4C-205ENST00000443289 RALGAPBQ86X10 1494 aa23.21■■□□□ 1.31
ATG4C-205ENST00000443289 CCER1Q8TC90 406 aaPredicted RBP23.19■■□□□ 1.3
ATG4C-205ENST00000443289 CARD11Q9BXL7 1154 aa23.19■■□□□ 1.3
ATG4C-205ENST00000443289 BTG4Q9NY30 223 aa23.19■■□□□ 1.3
ATG4C-205ENST00000443289 CABP1Q9NZU7 370 aa23.19■■□□□ 1.3
ATG4C-205ENST00000443289 CCDC9Q9Y3X0 531 aaKnown RBP23.19■■□□□ 1.3
ATG4C-205ENST00000443289 NWD2Q9ULI1 1742 aa23.19■■□□□ 1.3
ATG4C-205ENST00000443289 BRD4O60885 1362 aaPredicted RBP23.18■■□□□ 1.3
ATG4C-205ENST00000443289 ABTB2Q8N961 1025 aa23.18■■□□□ 1.3
ATG4C-205ENST00000443289 NUTM2GQ5VZR2 741 aa23.17■■□□□ 1.3
ATG4C-205ENST00000443289 PRDM11Q9NQV5 511 aa23.17■■□□□ 1.3
ATG4C-205ENST00000443289 PLCH1Q4KWH8 1693 aa23.16■■□□□ 1.3
ATG4C-205ENST00000443289 GLI3P10071 1580 aa23.15■■□□□ 1.3
ATG4C-205ENST00000443289 ONECUT3O60422 494 aaPredicted RBP23.15■■□□□ 1.3
ATG4C-205ENST00000443289 COL14A1Q05707 1796 aaKnown RBP23.14■■□□□ 1.3
ATG4C-205ENST00000443289 NLRP13Q86W25 1043 aa23.14■■□□□ 1.29
ATG4C-205ENST00000443289 SEPT12Q8IYM1 358 aa23.13■■□□□ 1.29
ATG4C-205ENST00000443289 KIAA0232Q92628 1395 aa23.13■■□□□ 1.29
ATG4C-205ENST00000443289 ZC3H6P61129 1189 aaKnown RBP23.12■■□□□ 1.29
ATG4C-205ENST00000443289 ZNF692Q9BU19 519 aaPredicted RBP23.12■■□□□ 1.29
ATG4C-205ENST00000443289 CRYBG1Q9Y4K1 1723 aa23.12■■□□□ 1.29
ATG4C-205ENST00000443289 SBNO2Q9Y2G9 1366 aa23.12■■□□□ 1.29
ATG4C-205ENST00000443289 USP6P35125 1406 aa23.1■■□□□ 1.29
ATG4C-205ENST00000443289 CCDC125Q86Z20 511 aa23.1■■□□□ 1.29
ATG4C-205ENST00000443289 USP19O94966 1318 aa23.09■■□□□ 1.29
ATG4C-205ENST00000443289 CHRNA2Q15822 529 aa23.08■■□□□ 1.29
ATG4C-205ENST00000443289 GCP02774 474 aa23.07■■□□□ 1.28
ATG4C-205ENST00000443289 NRAPQ86VF7 1730 aa23.07■■□□□ 1.28
ATG4C-205ENST00000443289 PHRF1Q9P1Y6 1649 aaKnown RBP23.07■■□□□ 1.28
ATG4C-205ENST00000443289 SPATA31A5Q5VU36 1347 aa23.07■■□□□ 1.28
ATG4C-205ENST00000443289 SPATA31A7Q8IWB4 1347 aa23.07■■□□□ 1.28
ATG4C-205ENST00000443289 NLRP6P59044 892 aa23.06■■□□□ 1.28
ATG4C-205ENST00000443289 CPDO75976 1380 aa23.05■■□□□ 1.28
ATG4C-205ENST00000443289 FAM98CQ17RN3 349 aaKnown RBP23.05■■□□□ 1.28
ATG4C-205ENST00000443289 SSH2Q76I76 1423 aa23.05■■□□□ 1.28
ATG4C-205ENST00000443289 CLSPNQ9HAW4 1339 aa23.05■■□□□ 1.28
ATG4C-205ENST00000443289 A0A0G2JS52 829 aa23.04■■□□□ 1.28
ATG4C-205ENST00000443289 MYT1Q01538 1121 aa23.04■■□□□ 1.28
ATG4C-205ENST00000443289 KRT27Q7Z3Y8 459 aa23.04■■□□□ 1.28
ATG4C-205ENST00000443289 EVA1CP58658 441 aa23.03■■□□□ 1.28
ATG4C-205ENST00000443289 STRN4Q9NRL3 753 aa23.03■■□□□ 1.28
ATG4C-205ENST00000443289 TTC21BQ7Z4L5 1316 aa23.02■■□□□ 1.28
ATG4C-205ENST00000443289 SLC24A1O60721 1099 aa23.01■■□□□ 1.27
ATG4C-205ENST00000443289 PUS7Q96PZ0 661 aaKnown RBP23.01■■□□□ 1.27
ATG4C-205ENST00000443289 TTC21AQ8NDW8 1320 aa23.01■■□□□ 1.27
ATG4C-205ENST00000443289 NRKQ7Z2Y5 1582 aa23.01■■□□□ 1.27
ATG4C-205ENST00000443289 CPSF1Q10570 1443 aaKnown RBP23■■□□□ 1.27
ATG4C-205ENST00000443289 SPATA31A1Q5TZJ5 1347 aa23■■□□□ 1.27
ATG4C-205ENST00000443289 KTN1Q86UP2 1357 aaKnown RBP23■■□□□ 1.27
ATG4C-205ENST00000443289 BRWD3Q6RI45 1802 aa22.99■■□□□ 1.27
ATG4C-205ENST00000443289 TIMELESSQ9UNS1 1208 aa22.98■■□□□ 1.27
ATG4C-205ENST00000443289 ST20-MTHFSA0A0A6YYL1 179 aa22.97■■□□□ 1.27
ATG4C-205ENST00000443289 TMC1Q8TDI8 760 aa22.97■■□□□ 1.27
ATG4C-205ENST00000443289 BLMP54132 1417 aaPredicted RBP22.97■■□□□ 1.27
ATG4C-205ENST00000443289 SF3B2Q13435 895 aaKnown RBP22.96■■□□□ 1.27
ATG4C-205ENST00000443289 KCNH5Q8NCM2 988 aa22.96■■□□□ 1.27
ATG4C-205ENST00000443289 SLIT3O75094 1523 aa22.96■■□□□ 1.27
ATG4C-205ENST00000443289 CAMTA1Q9Y6Y1 1673 aa22.96■■□□□ 1.27
ATG4C-205ENST00000443289 EP400Q96L91 3159 aa22.95■■□□□ 1.27
ATG4C-205ENST00000443289 HDGFL2Q7Z4V5 671 aaPredicted RBP22.95■■□□□ 1.26
ATG4C-205ENST00000443289 TESK2Q96S53 571 aa22.95■■□□□ 1.26
ATG4C-205ENST00000443289 AKAP12Q02952 1782 aa22.94■■□□□ 1.26
ATG4C-205ENST00000443289 AATKQ6ZMQ8 1374 aa22.94■■□□□ 1.26
ATG4C-205ENST00000443289 ZBTB7CA1YPR0 619 aa22.94■■□□□ 1.26
ATG4C-205ENST00000443289 LARP1Q6PKG0 1096 aaKnown RBP22.94■■□□□ 1.26
ATG4C-205ENST00000443289 SLC12A5Q9H2X9 1139 aa22.94■■□□□ 1.26
ATG4C-205ENST00000443289 USP35Q9P2H5 1018 aa22.94■■□□□ 1.26
ATG4C-205ENST00000443289 PIK3C2AO00443 1686 aa22.93■■□□□ 1.26
ATG4C-205ENST00000443289 BARGINQ6ZT62 677 aa22.93■■□□□ 1.26
ATG4C-205ENST00000443289 LMO7Q8WWI1 1683 aa22.93■■□□□ 1.26
ATG4C-205ENST00000443289 TCP11L2Q8N4U5 519 aa22.92■■□□□ 1.26
ATG4C-205ENST00000443289 TERF2IPQ9NYB0 399 aa22.92■■□□□ 1.26
ATG4C-205ENST00000443289 THRAP3Q9Y2W1 955 aaKnown RBP22.91■■□□□ 1.26
ATG4C-205ENST00000443289 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.9■■□□□ 1.26
ATG4C-205ENST00000443289 CD163L1Q9NR16 1453 aa22.9■■□□□ 1.26
ATG4C-205ENST00000443289 THSD7AQ9UPZ6 1657 aa22.9■■□□□ 1.26
ATG4C-205ENST00000443289 ARHGEF25Q86VW2 580 aa22.89■■□□□ 1.25
ATG4C-205ENST00000443289 COL5A2P05997 1499 aaPredicted RBP22.89■■□□□ 1.25
ATG4C-205ENST00000443289 USP31Q70CQ4 1352 aa22.89■■□□□ 1.25
ATG4C-205ENST00000443289 NINLQ9Y2I6 1382 aa22.88■■□□□ 1.25
ATG4C-205ENST00000443289 SOX12O15370 315 aa22.87■■□□□ 1.25
ATG4C-205ENST00000443289 ZRANB1Q9UGI0 708 aa22.87■■□□□ 1.25
ATG4C-205ENST00000443289 MON2Q7Z3U7 1717 aa22.87■■□□□ 1.25
ATG4C-205ENST00000443289 USP47Q96K76 1375 aa22.87■■□□□ 1.25
ATG4C-205ENST00000443289 CRB1P82279 1406 aa22.86■■□□□ 1.25
ATG4C-205ENST00000443289 EDC4Q6P2E9 1401 aaKnown RBP22.86■■□□□ 1.25
ATG4C-205ENST00000443289 TMF1P82094 1093 aa22.86■■□□□ 1.25
ATG4C-205ENST00000443289 DEFB132Q7Z7B7 95 aa22.86■■□□□ 1.25
ATG4C-205ENST00000443289 PDE3BQ13370 1112 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms