RNA–Protein interactions for RNA: ENST00000442560.5

RFX3-206, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-206ENST00000442560 SAFB2Q14151 953 aaKnown RBP eCLIP10.52□□□□□ -0.73
RFX3-206ENST00000442560 OTUD5Q96G74 571 aa10.52□□□□□ -0.73
RFX3-206ENST00000442560 GJD4Q96KN9 370 aaPredicted RBP10.52□□□□□ -0.73
RFX3-206ENST00000442560 BCL9LQ86UU0 1499 aa10.52□□□□□ -0.73
RFX3-206ENST00000442560 DHX57Q6P158 1386 aaKnown RBP10.52□□□□□ -0.73
RFX3-206ENST00000442560 PRAM1Q96QH2 718 aa10.51□□□□□ -0.73
RFX3-206ENST00000442560 PHF8Q9UPP1 1060 aa10.51□□□□□ -0.73
RFX3-206ENST00000442560 HAP1P54257 671 aaPredicted RBP10.5□□□□□ -0.73
RFX3-206ENST00000442560 PSME1Q06323 249 aa10.5□□□□□ -0.73
RFX3-206ENST00000442560 UNC5CLQ8IV45 518 aa10.5□□□□□ -0.73
RFX3-206ENST00000442560 CABLES1Q8TDN4 633 aa10.5□□□□□ -0.73
RFX3-206ENST00000442560 COL22A1Q8NFW1 1626 aaPredicted RBP10.5□□□□□ -0.73
RFX3-206ENST00000442560 LMOD2Q6P5Q4 547 aa10.49□□□□□ -0.73
RFX3-206ENST00000442560 PMFBP1Q8TBY8 1022 aa10.49□□□□□ -0.73
RFX3-206ENST00000442560 POGKQ9P215 609 aa10.49□□□□□ -0.73
RFX3-206ENST00000442560 ACIN1Q9UKV3 1341 aaKnown RBP10.49□□□□□ -0.73
RFX3-206ENST00000442560 TRAK1Q9UPV9 953 aa10.48□□□□□ -0.73
RFX3-206ENST00000442560 KDM2AQ9Y2K7 1162 aa10.48□□□□□ -0.73
RFX3-206ENST00000442560 SPDYE4A6NLX3 237 aa10.47□□□□□ -0.73
RFX3-206ENST00000442560 RAB3GAP2Q9H2M9 1393 aa10.47□□□□□ -0.73
RFX3-206ENST00000442560 NRXN1Q9ULB1 1477 aa10.47□□□□□ -0.73
RFX3-206ENST00000442560 PAK3O75914 559 aaPredicted RBP10.46□□□□□ -0.73
RFX3-206ENST00000442560 CCDC125Q86Z20 511 aa10.46□□□□□ -0.73
RFX3-206ENST00000442560 PELP1Q8IZL8 1130 aaKnown RBP10.46□□□□□ -0.73
RFX3-206ENST00000442560 HIRIP3Q9BW71 556 aaPredicted RBP10.46□□□□□ -0.73
RFX3-206ENST00000442560 CCDC9Q9Y3X0 531 aaKnown RBP10.46□□□□□ -0.73
RFX3-206ENST00000442560 TNS3Q68CZ2 1445 aa10.46□□□□□ -0.74
RFX3-206ENST00000442560 RALGAPBQ86X10 1494 aa10.46□□□□□ -0.74
RFX3-206ENST00000442560 SLIT2O94813 1529 aa10.46□□□□□ -0.74
RFX3-206ENST00000442560 IFT172Q9UG01 1749 aa10.46□□□□□ -0.74
RFX3-206ENST00000442560 KNDC1Q76NI1 1749 aa10.45□□□□□ -0.74
RFX3-206ENST00000442560 FMN2Q9NZ56 1722 aa10.45□□□□□ -0.74
RFX3-206ENST00000442560 SBNO1A3KN83 1393 aa10.45□□□□□ -0.74
RFX3-206ENST00000442560 MINK1Q8N4C8 1332 aaPredicted RBP10.45□□□□□ -0.74
RFX3-206ENST00000442560 VPS72Q15906 364 aa10.45□□□□□ -0.74
RFX3-206ENST00000442560 SEPT12Q8IYM1 358 aa10.45□□□□□ -0.74
RFX3-206ENST00000442560 DCAF11Q8TEB1 546 aa10.45□□□□□ -0.74
RFX3-206ENST00000442560 FAM83GA6ND36 823 aa10.43□□□□□ -0.74
RFX3-206ENST00000442560 DEFB132Q7Z7B7 95 aa10.43□□□□□ -0.74
RFX3-206ENST00000442560 KIF1AQ12756 1690 aa10.43□□□□□ -0.74
RFX3-206ENST00000442560 ARHGEF10O15013 1369 aa10.42□□□□□ -0.74
RFX3-206ENST00000442560 PRR36Q9H6K5 1346 aa10.42□□□□□ -0.74
RFX3-206ENST00000442560 WASLO00401 505 aaPredicted RBP10.42□□□□□ -0.74
RFX3-206ENST00000442560 GLI3P10071 1580 aa10.42□□□□□ -0.74
RFX3-206ENST00000442560 DLC1Q96QB1 1528 aa10.42□□□□□ -0.74
RFX3-206ENST00000442560 ANKARQ7Z5J8 1434 aa10.41□□□□□ -0.74
RFX3-206ENST00000442560 A0A0G2JS52 829 aa10.41□□□□□ -0.74
RFX3-206ENST00000442560 ONECUT3O60422 494 aaPredicted RBP10.41□□□□□ -0.74
RFX3-206ENST00000442560 MYT1Q01538 1121 aa10.41□□□□□ -0.74
RFX3-206ENST00000442560 SF3B2Q13435 895 aaKnown RBP10.41□□□□□ -0.74
RFX3-206ENST00000442560 NGDNQ8NEJ9 315 aaKnown RBP10.41□□□□□ -0.74
RFX3-206ENST00000442560 BLMP54132 1417 aaPredicted RBP10.41□□□□□ -0.74
RFX3-206ENST00000442560 GPRASP1Q5JY77 1395 aa10.4□□□□□ -0.74
RFX3-206ENST00000442560 USP32Q8NFA0 1604 aa10.4□□□□□ -0.74
RFX3-206ENST00000442560 ADGRB1O14514 1584 aa10.4□□□□□ -0.74
RFX3-206ENST00000442560 POTEMA6NI47 508 aa10.4□□□□□ -0.74
RFX3-206ENST00000442560 KRT27Q7Z3Y8 459 aa10.4□□□□□ -0.74
RFX3-206ENST00000442560 BTG4Q9NY30 223 aa10.4□□□□□ -0.74
RFX3-206ENST00000442560 FAM98CQ17RN3 349 aaKnown RBP10.39□□□□□ -0.75
RFX3-206ENST00000442560 EIF3AQ14152 1382 aaKnown RBP10.39□□□□□ -0.75
RFX3-206ENST00000442560 MARF1Q9Y4F3 1742 aaKnown RBP10.38□□□□□ -0.75
RFX3-206ENST00000442560 NUDT16Q96DE0 195 aaKnown RBP10.38□□□□□ -0.75
RFX3-206ENST00000442560 STAC3Q96MF2 364 aa10.38□□□□□ -0.75
RFX3-206ENST00000442560 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.38□□□□□ -0.75
RFX3-206ENST00000442560 MS4A3Q96HJ5 214 aa10.37□□□□□ -0.75
RFX3-206ENST00000442560 ADGRB2O60241 1585 aa10.36□□□□□ -0.75
RFX3-206ENST00000442560 HRCP23327 699 aa10.36□□□□□ -0.75
RFX3-206ENST00000442560 FAM182BQ5T319 152 aa10.36□□□□□ -0.75
RFX3-206ENST00000442560 POTEGQ6S5H5 508 aa10.36□□□□□ -0.75
RFX3-206ENST00000442560 CDK19Q9BWU1 502 aa10.36□□□□□ -0.75
RFX3-206ENST00000442560 PRDM11Q9NQV5 511 aa10.36□□□□□ -0.75
RFX3-206ENST00000442560 TULP4Q9NRJ4 1543 aa10.36□□□□□ -0.75
RFX3-206ENST00000442560 RGPD8O14715 1765 aaPredicted RBP10.36□□□□□ -0.75
RFX3-206ENST00000442560 BAG6P46379 1132 aa10.35□□□□□ -0.75
RFX3-206ENST00000442560 MNX1P50219 401 aaPredicted RBP10.35□□□□□ -0.75
RFX3-206ENST00000442560 CHRNA2Q15822 529 aa10.35□□□□□ -0.75
RFX3-206ENST00000442560 NUTM2GQ5VZR2 741 aa10.35□□□□□ -0.75
RFX3-206ENST00000442560 SPATA31A5Q5VU36 1347 aa10.34□□□□□ -0.75
RFX3-206ENST00000442560 SPATA31A7Q8IWB4 1347 aa10.34□□□□□ -0.75
RFX3-206ENST00000442560 STRN4Q9NRL3 753 aa10.34□□□□□ -0.75
RFX3-206ENST00000442560 PSDA5PKW4 1024 aaPredicted RBP10.33□□□□□ -0.76
RFX3-206ENST00000442560 ZC3H6P61129 1189 aaKnown RBP10.33□□□□□ -0.76
RFX3-206ENST00000442560 EN1Q05925 392 aaPredicted RBP10.33□□□□□ -0.76
RFX3-206ENST00000442560 NBPF1Q3BBV0 1214 aa10.33□□□□□ -0.76
RFX3-206ENST00000442560 NBPF8Q3BBV2 869 aa10.33□□□□□ -0.76
RFX3-206ENST00000442560 TSPYL2Q9H2G4 693 aaPredicted RBP10.33□□□□□ -0.76
RFX3-206ENST00000442560 METRNQ9UJH8 293 aa10.33□□□□□ -0.76
RFX3-206ENST00000442560 PLCH1Q4KWH8 1693 aa10.33□□□□□ -0.76
RFX3-206ENST00000442560 ACEP12821 1306 aa10.33□□□□□ -0.76
RFX3-206ENST00000442560 ATP7BP35670 1465 aa10.32□□□□□ -0.76
RFX3-206ENST00000442560 KIAA0232Q92628 1395 aa10.32□□□□□ -0.76
RFX3-206ENST00000442560 POTEJP0CG39 1038 aa10.32□□□□□ -0.76
RFX3-206ENST00000442560 CCDC61Q9Y6R9 512 aa10.32□□□□□ -0.76
RFX3-206ENST00000442560 TRPM3Q9HCF6 1732 aaPredicted RBP10.32□□□□□ -0.76
RFX3-206ENST00000442560 NWD2Q9ULI1 1742 aa10.32□□□□□ -0.76
RFX3-206ENST00000442560 ABCA3Q99758 1704 aa10.31□□□□□ -0.76
RFX3-206ENST00000442560 PLEKHG3A1L390 1219 aa10.31□□□□□ -0.76
RFX3-206ENST00000442560 USP35Q9P2H5 1018 aa10.31□□□□□ -0.76
RFX3-206ENST00000442560 SPATA31A1Q5TZJ5 1347 aa10.31□□□□□ -0.76
RFX3-206ENST00000442560 EVA1CP58658 441 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms