RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 ACEP12821 1306 aa27.13■■□□□ 1.93
HMGB3P22-201ENST00000442010 HAP1P54257 671 aaPredicted RBP27.12■■□□□ 1.93
HMGB3P22-201ENST00000442010 GLI3P10071 1580 aa27.11■■□□□ 1.93
HMGB3P22-201ENST00000442010 PLEKHG5O94827 1062 aa27.11■■□□□ 1.93
HMGB3P22-201ENST00000442010 GJD4Q96KN9 370 aaPredicted RBP27.1■■□□□ 1.93
HMGB3P22-201ENST00000442010 CABP2Q9NPB3 220 aa27.1■■□□□ 1.93
HMGB3P22-201ENST00000442010 NRAPQ86VF7 1730 aa27.1■■□□□ 1.93
HMGB3P22-201ENST00000442010 PPIP5K1Q6PFW1 1433 aa27.09■■□□□ 1.93
HMGB3P22-201ENST00000442010 SRPK2P78362 688 aaKnown RBP27.09■■□□□ 1.93
HMGB3P22-201ENST00000442010 FAM83GA6ND36 823 aa27.08■■□□□ 1.93
HMGB3P22-201ENST00000442010 PAK3O75914 559 aaPredicted RBP27.08■■□□□ 1.93
HMGB3P22-201ENST00000442010 PHRF1Q9P1Y6 1649 aaKnown RBP27.08■■□□□ 1.93
HMGB3P22-201ENST00000442010 TONSLQ96HA7 1378 aa27.08■■□□□ 1.93
HMGB3P22-201ENST00000442010 COL14A1Q05707 1796 aaKnown RBP27.07■■□□□ 1.92
HMGB3P22-201ENST00000442010 RALGAPBQ86X10 1494 aa27.06■■□□□ 1.92
HMGB3P22-201ENST00000442010 EVC2Q86UK5 1308 aa27.03■■□□□ 1.92
HMGB3P22-201ENST00000442010 VPS72Q15906 364 aa27.02■■□□□ 1.92
HMGB3P22-201ENST00000442010 BRWD3Q6RI45 1802 aa27.02■■□□□ 1.92
HMGB3P22-201ENST00000442010 CABP1Q9NZU7 370 aa27■■□□□ 1.91
HMGB3P22-201ENST00000442010 SBNO2Q9Y2G9 1366 aa26.99■■□□□ 1.91
HMGB3P22-201ENST00000442010 AKAP12Q02952 1782 aa26.99■■□□□ 1.91
HMGB3P22-201ENST00000442010 BRD4O60885 1362 aaPredicted RBP26.98■■□□□ 1.91
HMGB3P22-201ENST00000442010 CARD11Q9BXL7 1154 aa26.98■■□□□ 1.91
HMGB3P22-201ENST00000442010 NRKQ7Z2Y5 1582 aa26.97■■□□□ 1.91
HMGB3P22-201ENST00000442010 NUTM2GQ5VZR2 741 aa26.97■■□□□ 1.91
HMGB3P22-201ENST00000442010 USP6P35125 1406 aa26.97■■□□□ 1.91
HMGB3P22-201ENST00000442010 ATAD2Q6PL18 1390 aa26.97■■□□□ 1.91
HMGB3P22-201ENST00000442010 BTG4Q9NY30 223 aa26.96■■□□□ 1.91
HMGB3P22-201ENST00000442010 SSH2Q76I76 1423 aa26.96■■□□□ 1.91
HMGB3P22-201ENST00000442010 ABTB2Q8N961 1025 aa26.95■■□□□ 1.9
HMGB3P22-201ENST00000442010 EP400Q96L91 3159 aa26.95■■□□□ 1.9
HMGB3P22-201ENST00000442010 USP19O94966 1318 aa26.94■■□□□ 1.9
HMGB3P22-201ENST00000442010 ONECUT3O60422 494 aaPredicted RBP26.94■■□□□ 1.9
HMGB3P22-201ENST00000442010 KIAA0232Q92628 1395 aa26.94■■□□□ 1.9
HMGB3P22-201ENST00000442010 PRDM11Q9NQV5 511 aa26.92■■□□□ 1.9
HMGB3P22-201ENST00000442010 PIK3C2AO00443 1686 aa26.91■■□□□ 1.9
HMGB3P22-201ENST00000442010 LMO7Q8WWI1 1683 aa26.89■■□□□ 1.9
HMGB3P22-201ENST00000442010 ZC3H6P61129 1189 aaKnown RBP26.88■■□□□ 1.89
HMGB3P22-201ENST00000442010 NLRP13Q86W25 1043 aa26.88■■□□□ 1.89
HMGB3P22-201ENST00000442010 SEPT12Q8IYM1 358 aa26.88■■□□□ 1.89
HMGB3P22-201ENST00000442010 CCDC9Q9Y3X0 531 aaKnown RBP26.88■■□□□ 1.89
HMGB3P22-201ENST00000442010 CPSF1Q10570 1443 aaKnown RBP26.88■■□□□ 1.89
HMGB3P22-201ENST00000442010 MON2Q7Z3U7 1717 aa26.87■■□□□ 1.89
HMGB3P22-201ENST00000442010 CPDO75976 1380 aa26.87■■□□□ 1.89
HMGB3P22-201ENST00000442010 CHRNA2Q15822 529 aa26.87■■□□□ 1.89
HMGB3P22-201ENST00000442010 SLIT3O75094 1523 aa26.86■■□□□ 1.89
HMGB3P22-201ENST00000442010 SPATA31A5Q5VU36 1347 aa26.86■■□□□ 1.89
HMGB3P22-201ENST00000442010 SPATA31A7Q8IWB4 1347 aa26.86■■□□□ 1.89
HMGB3P22-201ENST00000442010 ZNF692Q9BU19 519 aaPredicted RBP26.85■■□□□ 1.89
HMGB3P22-201ENST00000442010 GCP02774 474 aa26.84■■□□□ 1.89
HMGB3P22-201ENST00000442010 CAMTA1Q9Y6Y1 1673 aa26.84■■□□□ 1.89
HMGB3P22-201ENST00000442010 THSD7AQ9UPZ6 1657 aa26.83■■□□□ 1.89
HMGB3P22-201ENST00000442010 CD163L1Q9NR16 1453 aa26.82■■□□□ 1.88
HMGB3P22-201ENST00000442010 TTC21BQ7Z4L5 1316 aa26.82■■□□□ 1.88
HMGB3P22-201ENST00000442010 NLRP6P59044 892 aa26.81■■□□□ 1.88
HMGB3P22-201ENST00000442010 FAM98CQ17RN3 349 aaKnown RBP26.81■■□□□ 1.88
HMGB3P22-201ENST00000442010 TESK2Q96S53 571 aa26.8■■□□□ 1.88
HMGB3P22-201ENST00000442010 COL18A1P39060 1754 aa26.79■■□□□ 1.88
HMGB3P22-201ENST00000442010 SPATA31A1Q5TZJ5 1347 aa26.79■■□□□ 1.88
HMGB3P22-201ENST00000442010 CLSPNQ9HAW4 1339 aa26.79■■□□□ 1.88
HMGB3P22-201ENST00000442010 CCDC125Q86Z20 511 aa26.78■■□□□ 1.88
HMGB3P22-201ENST00000442010 PUS7Q96PZ0 661 aaKnown RBP26.78■■□□□ 1.88
HMGB3P22-201ENST00000442010 TTC21AQ8NDW8 1320 aa26.78■■□□□ 1.88
HMGB3P22-201ENST00000442010 USP54Q70EL1 1684 aa26.77■■□□□ 1.88
HMGB3P22-201ENST00000442010 KTN1Q86UP2 1357 aaKnown RBP26.77■■□□□ 1.88
HMGB3P22-201ENST00000442010 ST20-MTHFSA0A0A6YYL1 179 aa26.77■■□□□ 1.88
HMGB3P22-201ENST00000442010 KRT27Q7Z3Y8 459 aa26.77■■□□□ 1.88
HMGB3P22-201ENST00000442010 STRN4Q9NRL3 753 aa26.76■■□□□ 1.87
HMGB3P22-201ENST00000442010 PCGF6Q9BYE7 350 aa26.75■■□□□ 1.87
HMGB3P22-201ENST00000442010 TIMELESSQ9UNS1 1208 aa26.74■■□□□ 1.87
HMGB3P22-201ENST00000442010 COL5A2P05997 1499 aaPredicted RBP26.74■■□□□ 1.87
HMGB3P22-201ENST00000442010 BLMP54132 1417 aaPredicted RBP26.73■■□□□ 1.87
HMGB3P22-201ENST00000442010 SLC12A5Q9H2X9 1139 aa26.73■■□□□ 1.87
HMGB3P22-201ENST00000442010 AATKQ6ZMQ8 1374 aa26.72■■□□□ 1.87
HMGB3P22-201ENST00000442010 RGPD5Q99666 1765 aa26.72■■□□□ 1.87
HMGB3P22-201ENST00000442010 LARP1Q6PKG0 1096 aaKnown RBP26.71■■□□□ 1.87
HMGB3P22-201ENST00000442010 NFAT5O94916 1531 aa26.7■■□□□ 1.87
HMGB3P22-201ENST00000442010 A0A0G2JS52 829 aa26.7■■□□□ 1.86
HMGB3P22-201ENST00000442010 EVA1CP58658 441 aa26.7■■□□□ 1.86
HMGB3P22-201ENST00000442010 MYT1Q01538 1121 aa26.7■■□□□ 1.86
HMGB3P22-201ENST00000442010 TMC1Q8TDI8 760 aa26.7■■□□□ 1.86
HMGB3P22-201ENST00000442010 USP31Q70CQ4 1352 aa26.69■■□□□ 1.86
HMGB3P22-201ENST00000442010 USP47Q96K76 1375 aa26.69■■□□□ 1.86
HMGB3P22-201ENST00000442010 BARGINQ6ZT62 677 aa26.68■■□□□ 1.86
HMGB3P22-201ENST00000442010 A0A1W2PP64 1363 aa26.68■■□□□ 1.86
HMGB3P22-201ENST00000442010 SLC24A1O60721 1099 aa26.67■■□□□ 1.86
HMGB3P22-201ENST00000442010 ARHGEF25Q86VW2 580 aa26.67■■□□□ 1.86
HMGB3P22-201ENST00000442010 KCNH5Q8NCM2 988 aa26.67■■□□□ 1.86
HMGB3P22-201ENST00000442010 ZRANB1Q9UGI0 708 aa26.66■■□□□ 1.86
HMGB3P22-201ENST00000442010 NINLQ9Y2I6 1382 aa26.66■■□□□ 1.86
HMGB3P22-201ENST00000442010 EDC4Q6P2E9 1401 aaKnown RBP26.65■■□□□ 1.86
HMGB3P22-201ENST00000442010 HDGFL2Q7Z4V5 671 aaPredicted RBP26.65■■□□□ 1.86
HMGB3P22-201ENST00000442010 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.65■■□□□ 1.86
HMGB3P22-201ENST00000442010 USP35Q9P2H5 1018 aa26.65■■□□□ 1.86
HMGB3P22-201ENST00000442010 AXIN2Q9Y2T1 843 aa26.65■■□□□ 1.86
HMGB3P22-201ENST00000442010 TCP11L2Q8N4U5 519 aa26.64■■□□□ 1.86
HMGB3P22-201ENST00000442010 PARP4Q9UKK3 1724 aaKnown RBP26.64■■□□□ 1.85
HMGB3P22-201ENST00000442010 CRB1P82279 1406 aa26.64■■□□□ 1.85
HMGB3P22-201ENST00000442010 RGPD1P0DJD0 1748 aa26.63■■□□□ 1.85
HMGB3P22-201ENST00000442010 NME9Q86XW9 330 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms