RNA–Protein interactions for RNA: ENST00000441796.1

CRAT-204, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-204ENST00000441796 ALS2Q96Q42 1657 aa32.39■■■□□ 2.78
CRAT-204ENST00000441796 BRD4O60885 1362 aaPredicted RBP32.38■■■□□ 2.77
CRAT-204ENST00000441796 ATAD2Q6PL18 1390 aa32.38■■■□□ 2.77
CRAT-204ENST00000441796 RBM6P78332 1123 aaKnown RBP32.37■■■□□ 2.77
CRAT-204ENST00000441796 TRPC5Q9UL62 973 aaPredicted RBP32.37■■■□□ 2.77
CRAT-204ENST00000441796 PLEKHG5O94827 1062 aa32.36■■■□□ 2.77
CRAT-204ENST00000441796 BCL9LQ86UU0 1499 aa32.35■■■□□ 2.77
CRAT-204ENST00000441796 CDK12Q9NYV4 1490 aaPredicted RBP32.34■■■□□ 2.77
CRAT-204ENST00000441796 SLIT2O94813 1529 aa32.33■■■□□ 2.77
CRAT-204ENST00000441796 SLC24A1O60721 1099 aa32.33■■■□□ 2.77
CRAT-204ENST00000441796 ST20-MTHFSA0A0A6YYL1 179 aa32.32■■■□□ 2.76
CRAT-204ENST00000441796 PUS7Q96PZ0 661 aaKnown RBP32.32■■■□□ 2.76
CRAT-204ENST00000441796 ATRNO75882 1429 aa32.32■■■□□ 2.76
CRAT-204ENST00000441796 MARF1Q9Y4F3 1742 aaKnown RBP32.31■■■□□ 2.76
CRAT-204ENST00000441796 TESK2Q96S53 571 aa32.31■■■□□ 2.76
CRAT-204ENST00000441796 ZNF692Q9BU19 519 aaPredicted RBP32.31■■■□□ 2.76
CRAT-204ENST00000441796 USP6P35125 1406 aa32.3■■■□□ 2.76
CRAT-204ENST00000441796 UNC5CLQ8IV45 518 aa32.3■■■□□ 2.76
CRAT-204ENST00000441796 ABTB2Q8N961 1025 aa32.29■■■□□ 2.76
CRAT-204ENST00000441796 FAM83GA6ND36 823 aa32.28■■■□□ 2.76
CRAT-204ENST00000441796 ABCA3Q99758 1704 aa32.28■■■□□ 2.76
CRAT-204ENST00000441796 USP47Q96K76 1375 aa32.26■■■□□ 2.75
CRAT-204ENST00000441796 SSH2Q76I76 1423 aa32.26■■■□□ 2.75
CRAT-204ENST00000441796 NUTM2GQ5VZR2 741 aa32.25■■■□□ 2.75
CRAT-204ENST00000441796 NLRP13Q86W25 1043 aa32.24■■■□□ 2.75
CRAT-204ENST00000441796 CPSF1Q10570 1443 aaKnown RBP32.24■■■□□ 2.75
CRAT-204ENST00000441796 GJD4Q96KN9 370 aaPredicted RBP32.22■■■□□ 2.75
CRAT-204ENST00000441796 USP19O94966 1318 aa32.22■■■□□ 2.75
CRAT-204ENST00000441796 CRYBG1Q9Y4K1 1723 aa32.2■■■□□ 2.75
CRAT-204ENST00000441796 RGS12O14924 1447 aa32.19■■■□□ 2.74
CRAT-204ENST00000441796 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.18■■■□□ 2.74
CRAT-204ENST00000441796 VPS72Q15906 364 aa32.18■■■□□ 2.74
CRAT-204ENST00000441796 PRDM11Q9NQV5 511 aa32.18■■■□□ 2.74
CRAT-204ENST00000441796 TTC21BQ7Z4L5 1316 aa32.18■■■□□ 2.74
CRAT-204ENST00000441796 TMC1Q8TDI8 760 aa32.17■■■□□ 2.74
CRAT-204ENST00000441796 NLRP6P59044 892 aa32.16■■■□□ 2.74
CRAT-204ENST00000441796 SLC12A5Q9H2X9 1139 aa32.16■■■□□ 2.74
CRAT-204ENST00000441796 BTG4Q9NY30 223 aa32.16■■■□□ 2.74
CRAT-204ENST00000441796 TTC21AQ8NDW8 1320 aa32.16■■■□□ 2.74
CRAT-204ENST00000441796 KTN1Q86UP2 1357 aaKnown RBP32.16■■■□□ 2.74
CRAT-204ENST00000441796 KIAA0232Q92628 1395 aa32.16■■■□□ 2.74
CRAT-204ENST00000441796 GCP02774 474 aa32.14■■■□□ 2.74
CRAT-204ENST00000441796 TMF1P82094 1093 aa32.14■■■□□ 2.74
CRAT-204ENST00000441796 NWD2Q9ULI1 1742 aa32.14■■■□□ 2.74
CRAT-204ENST00000441796 ZC3H6P61129 1189 aaKnown RBP32.13■■■□□ 2.73
CRAT-204ENST00000441796 NINLQ9Y2I6 1382 aa32.13■■■□□ 2.73
CRAT-204ENST00000441796 COL14A1Q05707 1796 aaKnown RBP32.12■■■□□ 2.73
CRAT-204ENST00000441796 PHRF1Q9P1Y6 1649 aaKnown RBP32.12■■■□□ 2.73
CRAT-204ENST00000441796 CD163L1Q9NR16 1453 aa32.12■■■□□ 2.73
CRAT-204ENST00000441796 CPDO75976 1380 aa32.12■■■□□ 2.73
CRAT-204ENST00000441796 HDGFL2Q7Z4V5 671 aaPredicted RBP32.12■■■□□ 2.73
CRAT-204ENST00000441796 PLCH1Q4KWH8 1693 aa32.11■■■□□ 2.73
CRAT-204ENST00000441796 TERF2IPQ9NYB0 399 aa32.11■■■□□ 2.73
CRAT-204ENST00000441796 AKAP12Q02952 1782 aa32.09■■■□□ 2.73
CRAT-204ENST00000441796 NRKQ7Z2Y5 1582 aa32.08■■■□□ 2.73
CRAT-204ENST00000441796 CHRNA2Q15822 529 aa32.08■■■□□ 2.73
CRAT-204ENST00000441796 CDCA8Q53HL2 280 aa32.07■■■□□ 2.72
CRAT-204ENST00000441796 SLIT3O75094 1523 aa32.06■■■□□ 2.72
CRAT-204ENST00000441796 CCDC9Q9Y3X0 531 aaKnown RBP32.06■■■□□ 2.72
CRAT-204ENST00000441796 GLI3P10071 1580 aa32.06■■■□□ 2.72
CRAT-204ENST00000441796 A0A1W2PP64 1363 aa32.05■■■□□ 2.72
CRAT-204ENST00000441796 ONECUT3O60422 494 aaPredicted RBP32.04■■■□□ 2.72
CRAT-204ENST00000441796 PIK3C2AO00443 1686 aa32.04■■■□□ 2.72
CRAT-204ENST00000441796 EDC4Q6P2E9 1401 aaKnown RBP32.03■■■□□ 2.72
CRAT-204ENST00000441796 NRAPQ86VF7 1730 aa32.03■■■□□ 2.72
CRAT-204ENST00000441796 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.02■■■□□ 2.72
CRAT-204ENST00000441796 KCNH5Q8NCM2 988 aa32.02■■■□□ 2.72
CRAT-204ENST00000441796 MON2Q7Z3U7 1717 aa32.01■■■□□ 2.72
CRAT-204ENST00000441796 UPF1Q92900 1129 aaKnown RBP eCLIP32.01■■■□□ 2.71
CRAT-204ENST00000441796 USP31Q70CQ4 1352 aa32.01■■■□□ 2.71
CRAT-204ENST00000441796 SPATA31A5Q5VU36 1347 aa32■■■□□ 2.71
CRAT-204ENST00000441796 SPATA31A7Q8IWB4 1347 aa32■■■□□ 2.71
CRAT-204ENST00000441796 EIF4G2P78344 907 aaKnown RBP eCLIP31.99■■■□□ 2.71
CRAT-204ENST00000441796 NME9Q86XW9 330 aa31.97■■■□□ 2.71
CRAT-204ENST00000441796 SEPT12Q8IYM1 358 aa31.97■■■□□ 2.71
CRAT-204ENST00000441796 AATKQ6ZMQ8 1374 aa31.96■■■□□ 2.71
CRAT-204ENST00000441796 ANKRD36BQ8N2N9 1353 aa31.96■■■□□ 2.71
CRAT-204ENST00000441796 EVA1CP58658 441 aa31.95■■■□□ 2.71
CRAT-204ENST00000441796 STRN4Q9NRL3 753 aa31.95■■■□□ 2.71
CRAT-204ENST00000441796 CAMTA1Q9Y6Y1 1673 aa31.95■■■□□ 2.7
CRAT-204ENST00000441796 ARHGEF25Q86VW2 580 aa31.94■■■□□ 2.7
CRAT-204ENST00000441796 ZRANB1Q9UGI0 708 aa31.94■■■□□ 2.7
CRAT-204ENST00000441796 LMO7Q8WWI1 1683 aa31.93■■■□□ 2.7
CRAT-204ENST00000441796 SPATA31A1Q5TZJ5 1347 aa31.93■■■□□ 2.7
CRAT-204ENST00000441796 HSPA5P11021 654 aaKnown RBP31.91■■■□□ 2.7
CRAT-204ENST00000441796 FAM98CQ17RN3 349 aaKnown RBP31.91■■■□□ 2.7
CRAT-204ENST00000441796 ZBTB7CA1YPR0 619 aa31.89■■■□□ 2.7
CRAT-204ENST00000441796 SOX12O15370 315 aa31.88■■■□□ 2.69
CRAT-204ENST00000441796 LARP1Q6PKG0 1096 aaKnown RBP31.88■■■□□ 2.69
CRAT-204ENST00000441796 NFAT5O94916 1531 aa31.87■■■□□ 2.69
CRAT-204ENST00000441796 COL5A2P05997 1499 aaPredicted RBP31.87■■■□□ 2.69
CRAT-204ENST00000441796 USP54Q70EL1 1684 aa31.86■■■□□ 2.69
CRAT-204ENST00000441796 OVOS2A0A0J9YW53 1432 aa31.86■■■□□ 2.69
CRAT-204ENST00000441796 OVOS2Q6IE36 1432 aa31.86■■■□□ 2.69
CRAT-204ENST00000441796 A0A0G2JS52 829 aa31.84■■■□□ 2.69
CRAT-204ENST00000441796 MYT1Q01538 1121 aa31.84■■■□□ 2.69
CRAT-204ENST00000441796 BARGINQ6ZT62 677 aa31.84■■■□□ 2.69
CRAT-204ENST00000441796 KRT27Q7Z3Y8 459 aa31.84■■■□□ 2.69
CRAT-204ENST00000441796 AXIN2Q9Y2T1 843 aa31.84■■■□□ 2.69
CRAT-204ENST00000441796 THRAP3Q9Y2W1 955 aaKnown RBP31.82■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms