RNA–Protein interactions for RNA: ENST00000441411.1

SCN7A-204, Transcript of sodium voltage-gated channel alpha subunit 7, humanhuman

TSL 1 (best)

Gene SCN7A, Length 1,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7A-204ENST00000441411 ADAMTS2O95450 1211 aa13.27□□□□□ -0.29
SCN7A-204ENST00000441411 TIE1P35590 1138 aa13.27□□□□□ -0.29
SCN7A-204ENST00000441411 ESCO1Q5FWF5 840 aa13.27□□□□□ -0.29
SCN7A-204ENST00000441411 SIRT1Q96EB6 747 aa13.27□□□□□ -0.29
SCN7A-204ENST00000441411 TRPC5Q9UL62 973 aaPredicted RBP13.27□□□□□ -0.29
SCN7A-204ENST00000441411 TECPR2O15040 1411 aa13.26□□□□□ -0.29
SCN7A-204ENST00000441411 SETD1AO15047 1707 aaKnown RBP13.26□□□□□ -0.29
SCN7A-204ENST00000441411 RGL3Q3MIN7 710 aa13.26□□□□□ -0.29
SCN7A-204ENST00000441411 FNBP4Q8N3X1 1017 aaPredicted RBP13.26□□□□□ -0.29
SCN7A-204ENST00000441411 TSPYL2Q9H2G4 693 aaPredicted RBP13.26□□□□□ -0.29
SCN7A-204ENST00000441411 USP21Q9UK80 565 aa13.26□□□□□ -0.29
SCN7A-204ENST00000441411 PPLO60437 1756 aa13.26□□□□□ -0.29
SCN7A-204ENST00000441411 CDC42BPGQ6DT37 1551 aa13.25□□□□□ -0.29
SCN7A-204ENST00000441411 ADGRF5Q8IZF2 1346 aa13.25□□□□□ -0.29
SCN7A-204ENST00000441411 SPATA31E1Q6ZUB1 1445 aa13.25□□□□□ -0.29
SCN7A-204ENST00000441411 ATAD2Q6PL18 1390 aa13.23□□□□□ -0.29
SCN7A-204ENST00000441411 STK26Q9P289 416 aa13.23□□□□□ -0.29
SCN7A-204ENST00000441411 RGS12O14924 1447 aa13.22□□□□□ -0.29
SCN7A-204ENST00000441411 FOXO3O43524 673 aa13.22□□□□□ -0.29
SCN7A-204ENST00000441411 PIK3C2GO75747 1445 aa13.21□□□□□ -0.29
SCN7A-204ENST00000441411 DHX57Q6P158 1386 aaKnown RBP13.21□□□□□ -0.29
SCN7A-204ENST00000441411 CCDC125Q86Z20 511 aa13.21□□□□□ -0.3
SCN7A-204ENST00000441411 C14orf93Q9H972 538 aaKnown RBP13.21□□□□□ -0.3
SCN7A-204ENST00000441411 COL22A1Q8NFW1 1626 aaPredicted RBP13.21□□□□□ -0.3
SCN7A-204ENST00000441411 PSME1Q06323 249 aa13.2□□□□□ -0.3
SCN7A-204ENST00000441411 WAPLQ7Z5K2 1190 aa13.2□□□□□ -0.3
SCN7A-204ENST00000441411 TMEM121BQ9BXQ6 578 aaPredicted RBP13.2□□□□□ -0.3
SCN7A-204ENST00000441411 MYOM2P54296 1465 aa13.2□□□□□ -0.3
SCN7A-204ENST00000441411 YTHDC2Q9H6S0 1430 aaKnown RBP13.19□□□□□ -0.3
SCN7A-204ENST00000441411 TMEM132EQ6IEE7 984 aa13.19□□□□□ -0.3
SCN7A-204ENST00000441411 STAC3Q96MF2 364 aa13.19□□□□□ -0.3
SCN7A-204ENST00000441411 PXDNQ92626 1479 aa13.19□□□□□ -0.3
SCN7A-204ENST00000441411 ATRNO75882 1429 aa13.19□□□□□ -0.3
SCN7A-204ENST00000441411 SPATA31A3Q5VYP0 1347 aa13.18□□□□□ -0.3
SCN7A-204ENST00000441411 TTLL13PA6NNM8 815 aa13.17□□□□□ -0.3
SCN7A-204ENST00000441411 KRT28Q7Z3Y7 464 aa13.16□□□□□ -0.3
SCN7A-204ENST00000441411 KNDC1Q76NI1 1749 aa13.16□□□□□ -0.3
SCN7A-204ENST00000441411 GJD4Q96KN9 370 aaPredicted RBP13.16□□□□□ -0.3
SCN7A-204ENST00000441411 PHF8Q9UPP1 1060 aa13.16□□□□□ -0.3
SCN7A-204ENST00000441411 BCL9LQ86UU0 1499 aa13.15□□□□□ -0.3
SCN7A-204ENST00000441411 NRXN1Q9ULB1 1477 aa13.15□□□□□ -0.3
SCN7A-204ENST00000441411 IFT172Q9UG01 1749 aa13.15□□□□□ -0.3
SCN7A-204ENST00000441411 NUTM2FA1L443 756 aa13.15□□□□□ -0.3
SCN7A-204ENST00000441411 HAP1P54257 671 aaPredicted RBP13.15□□□□□ -0.3
SCN7A-204ENST00000441411 IER5LQ5T953 404 aa13.15□□□□□ -0.3
SCN7A-204ENST00000441411 UNC5CLQ8IV45 518 aa13.15□□□□□ -0.3
SCN7A-204ENST00000441411 KIF1AQ12756 1690 aa13.15□□□□□ -0.3
SCN7A-204ENST00000441411 PLEKHH1Q9ULM0 1364 aa13.15□□□□□ -0.31
SCN7A-204ENST00000441411 MAP3K13O43283 966 aa13.14□□□□□ -0.31
SCN7A-204ENST00000441411 XPCQ01831 940 aaPredicted RBP13.14□□□□□ -0.31
SCN7A-204ENST00000441411 POGKQ9P215 609 aa13.14□□□□□ -0.31
SCN7A-204ENST00000441411 SBNO1A3KN83 1393 aa13.14□□□□□ -0.31
SCN7A-204ENST00000441411 CFAP70Q5T0N1 1121 aa13.13□□□□□ -0.31
SCN7A-204ENST00000441411 ARHGEF10O15013 1369 aa13.13□□□□□ -0.31
SCN7A-204ENST00000441411 EIF3AQ14152 1382 aaKnown RBP13.13□□□□□ -0.31
SCN7A-204ENST00000441411 ANKARQ7Z5J8 1434 aa13.12□□□□□ -0.31
SCN7A-204ENST00000441411 FMN2Q9NZ56 1722 aa13.12□□□□□ -0.31
SCN7A-204ENST00000441411 HRCP23327 699 aa13.11□□□□□ -0.31
SCN7A-204ENST00000441411 PRAM1Q96QH2 718 aa13.11□□□□□ -0.31
SCN7A-204ENST00000441411 SLIT2O94813 1529 aa13.11□□□□□ -0.31
SCN7A-204ENST00000441411 DLC1Q96QB1 1528 aa13.11□□□□□ -0.31
SCN7A-204ENST00000441411 TNS3Q68CZ2 1445 aa13.11□□□□□ -0.31
SCN7A-204ENST00000441411 MARVELD3Q96A59 401 aa13.1□□□□□ -0.31
SCN7A-204ENST00000441411 RAB3GAP2Q9H2M9 1393 aa13.09□□□□□ -0.31
SCN7A-204ENST00000441411 VPS72Q15906 364 aa13.09□□□□□ -0.31
SCN7A-204ENST00000441411 MARF1Q9Y4F3 1742 aaKnown RBP13.08□□□□□ -0.31
SCN7A-204ENST00000441411 GPRASP1Q5JY77 1395 aa13.08□□□□□ -0.32
SCN7A-204ENST00000441411 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.08□□□□□ -0.32
SCN7A-204ENST00000441411 TRIM35Q9UPQ4 493 aa13.08□□□□□ -0.32
SCN7A-204ENST00000441411 SF3B2Q13435 895 aaKnown RBP13.07□□□□□ -0.32
SCN7A-204ENST00000441411 LMOD2Q6P5Q4 547 aa13.07□□□□□ -0.32
SCN7A-204ENST00000441411 ONECUT3O60422 494 aaPredicted RBP13.06□□□□□ -0.32
SCN7A-204ENST00000441411 SAFB2Q14151 953 aaKnown RBP eCLIP13.06□□□□□ -0.32
SCN7A-204ENST00000441411 RALGAPBQ86X10 1494 aa13.06□□□□□ -0.32
SCN7A-204ENST00000441411 USP32Q8NFA0 1604 aa13.06□□□□□ -0.32
SCN7A-204ENST00000441411 BLMP54132 1417 aaPredicted RBP13.06□□□□□ -0.32
SCN7A-204ENST00000441411 SEPT12Q8IYM1 358 aa13.04□□□□□ -0.32
SCN7A-204ENST00000441411 DCAF11Q8TEB1 546 aa13.04□□□□□ -0.32
SCN7A-204ENST00000441411 TRAK1Q9UPV9 953 aa13.04□□□□□ -0.32
SCN7A-204ENST00000441411 CCDC9Q9Y3X0 531 aaKnown RBP13.04□□□□□ -0.32
SCN7A-204ENST00000441411 ADGRB2O60241 1585 aa13.04□□□□□ -0.32
SCN7A-204ENST00000441411 WASLO00401 505 aaPredicted RBP13.04□□□□□ -0.32
SCN7A-204ENST00000441411 PMFBP1Q8TBY8 1022 aa13.04□□□□□ -0.32
SCN7A-204ENST00000441411 ADGRB1O14514 1584 aa13.03□□□□□ -0.32
SCN7A-204ENST00000441411 SPDYE4A6NLX3 237 aa13.03□□□□□ -0.32
SCN7A-204ENST00000441411 CABLES1Q8TDN4 633 aa13.03□□□□□ -0.32
SCN7A-204ENST00000441411 KDM2AQ9Y2K7 1162 aa13.03□□□□□ -0.32
SCN7A-204ENST00000441411 KRT27Q7Z3Y8 459 aa13.02□□□□□ -0.33
SCN7A-204ENST00000441411 NGDNQ8NEJ9 315 aaKnown RBP13.02□□□□□ -0.33
SCN7A-204ENST00000441411 KRTAP3-3Q9BYR6 98 aa13.02□□□□□ -0.33
SCN7A-204ENST00000441411 KRTAP3-2Q9BYR7 98 aa13.02□□□□□ -0.33
SCN7A-204ENST00000441411 FAM83GA6ND36 823 aa13.01□□□□□ -0.33
SCN7A-204ENST00000441411 SNPHO15079 494 aa13.01□□□□□ -0.33
SCN7A-204ENST00000441411 MINK1Q8N4C8 1332 aaPredicted RBP13.01□□□□□ -0.33
SCN7A-204ENST00000441411 TULP4Q9NRJ4 1543 aa13.01□□□□□ -0.33
SCN7A-204ENST00000441411 GLI3P10071 1580 aa13.01□□□□□ -0.33
SCN7A-204ENST00000441411 NWD2Q9ULI1 1742 aa13.01□□□□□ -0.33
SCN7A-204ENST00000441411 HIRIP3Q9BW71 556 aaPredicted RBP13□□□□□ -0.33
SCN7A-204ENST00000441411 BTG4Q9NY30 223 aa12.98□□□□□ -0.33
SCN7A-204ENST00000441411 PRR36Q9H6K5 1346 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms