RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 PLCH1Q4KWH8 1693 aa16.84■□□□□ 0.29
UBE2D4-204ENST00000440899 ALS2Q96Q42 1657 aa16.84■□□□□ 0.29
UBE2D4-204ENST00000440899 NBPF1Q3BBV0 1214 aa16.83■□□□□ 0.28
UBE2D4-204ENST00000440899 KRT27Q7Z3Y8 459 aa16.83■□□□□ 0.28
UBE2D4-204ENST00000440899 PRDM11Q9NQV5 511 aa16.82■□□□□ 0.28
UBE2D4-204ENST00000440899 ACEP12821 1306 aa16.81■□□□□ 0.28
UBE2D4-204ENST00000440899 A0A0G2JS52 829 aa16.81■□□□□ 0.28
UBE2D4-204ENST00000440899 PLEKHG3A1L390 1219 aa16.81■□□□□ 0.28
UBE2D4-204ENST00000440899 MYT1Q01538 1121 aa16.81■□□□□ 0.28
UBE2D4-204ENST00000440899 SF3B2Q13435 895 aaKnown RBP16.81■□□□□ 0.28
UBE2D4-204ENST00000440899 FAM98CQ17RN3 349 aaKnown RBP16.81■□□□□ 0.28
UBE2D4-204ENST00000440899 NBPF8Q3BBV2 869 aa16.81■□□□□ 0.28
UBE2D4-204ENST00000440899 KIAA1210Q9ULL0 1709 aa16.81■□□□□ 0.28
UBE2D4-204ENST00000440899 COL14A1Q05707 1796 aaKnown RBP16.79■□□□□ 0.28
UBE2D4-204ENST00000440899 ITSN1Q15811 1721 aa16.79■□□□□ 0.28
UBE2D4-204ENST00000440899 POLR3AO14802 1390 aaPredicted RBP16.79■□□□□ 0.28
UBE2D4-204ENST00000440899 BRWD3Q6RI45 1802 aa16.79■□□□□ 0.28
UBE2D4-204ENST00000440899 SPATA31A5Q5VU36 1347 aa16.78■□□□□ 0.28
UBE2D4-204ENST00000440899 SPATA31A7Q8IWB4 1347 aa16.78■□□□□ 0.28
UBE2D4-204ENST00000440899 CENPJQ9HC77 1338 aaPredicted RBP16.77■□□□□ 0.28
UBE2D4-204ENST00000440899 SRPK2P78362 688 aaKnown RBP16.77■□□□□ 0.28
UBE2D4-204ENST00000440899 NUTM2GQ5VZR2 741 aa16.77■□□□□ 0.28
UBE2D4-204ENST00000440899 DEFB132Q7Z7B7 95 aa16.77■□□□□ 0.28
UBE2D4-204ENST00000440899 KIAA0232Q92628 1395 aa16.77■□□□□ 0.27
UBE2D4-204ENST00000440899 NRAPQ86VF7 1730 aa16.76■□□□□ 0.27
UBE2D4-204ENST00000440899 L3MBTL2Q969R5 705 aa16.76■□□□□ 0.27
UBE2D4-204ENST00000440899 ZC3H6P61129 1189 aaKnown RBP16.75■□□□□ 0.27
UBE2D4-204ENST00000440899 CHRNA2Q15822 529 aa16.75■□□□□ 0.27
UBE2D4-204ENST00000440899 ABTB2Q8N961 1025 aa16.75■□□□□ 0.27
UBE2D4-204ENST00000440899 CRYBG1Q9Y4K1 1723 aa16.74■□□□□ 0.27
UBE2D4-204ENST00000440899 CABP2Q9NPB3 220 aa16.73■□□□□ 0.27
UBE2D4-204ENST00000440899 SPATA31A1Q5TZJ5 1347 aa16.72■□□□□ 0.27
UBE2D4-204ENST00000440899 TOPAZ1Q8N9V7 1692 aa16.72■□□□□ 0.27
UBE2D4-204ENST00000440899 BAG6P46379 1132 aa16.72■□□□□ 0.27
UBE2D4-204ENST00000440899 NLRP13Q86W25 1043 aa16.72■□□□□ 0.27
UBE2D4-204ENST00000440899 STRN4Q9NRL3 753 aa16.72■□□□□ 0.27
UBE2D4-204ENST00000440899 PPIP5K1Q6PFW1 1433 aa16.71■□□□□ 0.27
UBE2D4-204ENST00000440899 EVA1CP58658 441 aa16.71■□□□□ 0.27
UBE2D4-204ENST00000440899 SIN3AQ96ST3 1273 aa16.71■□□□□ 0.27
UBE2D4-204ENST00000440899 BRD4O60885 1362 aaPredicted RBP16.71■□□□□ 0.27
UBE2D4-204ENST00000440899 USP19O94966 1318 aa16.7■□□□□ 0.26
UBE2D4-204ENST00000440899 CPDO75976 1380 aa16.69■□□□□ 0.26
UBE2D4-204ENST00000440899 GCP02774 474 aa16.69■□□□□ 0.26
UBE2D4-204ENST00000440899 NEUROD1Q13562 356 aa16.69■□□□□ 0.26
UBE2D4-204ENST00000440899 FAM182BQ5T319 152 aa16.69■□□□□ 0.26
UBE2D4-204ENST00000440899 CABP1Q9NZU7 370 aa16.69■□□□□ 0.26
UBE2D4-204ENST00000440899 PHRF1Q9P1Y6 1649 aaKnown RBP16.69■□□□□ 0.26
UBE2D4-204ENST00000440899 EVC2Q86UK5 1308 aa16.68■□□□□ 0.26
UBE2D4-204ENST00000440899 THSD7AQ9UPZ6 1657 aa16.66■□□□□ 0.26
UBE2D4-204ENST00000440899 FAM196AQ6ZSG2 479 aa16.66■□□□□ 0.26
UBE2D4-204ENST00000440899 BARGINQ6ZT62 677 aa16.66■□□□□ 0.26
UBE2D4-204ENST00000440899 SSH2Q76I76 1423 aa16.66■□□□□ 0.26
UBE2D4-204ENST00000440899 USP35Q9P2H5 1018 aa16.66■□□□□ 0.26
UBE2D4-204ENST00000440899 NLRP6P59044 892 aa16.65■□□□□ 0.26
UBE2D4-204ENST00000440899 LARP1Q6PKG0 1096 aaKnown RBP16.65■□□□□ 0.26
UBE2D4-204ENST00000440899 QRICH2Q9H0J4 1663 aa16.65■□□□□ 0.26
UBE2D4-204ENST00000440899 ROCK2O75116 1388 aaKnown RBP16.64■□□□□ 0.26
UBE2D4-204ENST00000440899 USP6P35125 1406 aa16.64■□□□□ 0.25
UBE2D4-204ENST00000440899 EN1Q05925 392 aaPredicted RBP16.64■□□□□ 0.25
UBE2D4-204ENST00000440899 TCP11L2Q8N4U5 519 aa16.64■□□□□ 0.25
UBE2D4-204ENST00000440899 CAMTA1Q9Y6Y1 1673 aa16.64■□□□□ 0.25
UBE2D4-204ENST00000440899 NRKQ7Z2Y5 1582 aa16.64■□□□□ 0.25
UBE2D4-204ENST00000440899 PDE3BQ13370 1112 aa16.63■□□□□ 0.25
UBE2D4-204ENST00000440899 ZNF692Q9BU19 519 aaPredicted RBP16.63■□□□□ 0.25
UBE2D4-204ENST00000440899 THRAP3Q9Y2W1 955 aaKnown RBP16.63■□□□□ 0.25
UBE2D4-204ENST00000440899 DISP2A7MBM2 1401 aa16.62■□□□□ 0.25
UBE2D4-204ENST00000440899 TRPM1Q7Z4N2 1603 aa16.61■□□□□ 0.25
UBE2D4-204ENST00000440899 TRIM37O94972 964 aa16.61■□□□□ 0.25
UBE2D4-204ENST00000440899 LMO7Q8WWI1 1683 aa16.6■□□□□ 0.25
UBE2D4-204ENST00000440899 RGPD1P0DJD0 1748 aa16.6■□□□□ 0.25
UBE2D4-204ENST00000440899 AATKQ6ZMQ8 1374 aa16.6■□□□□ 0.25
UBE2D4-204ENST00000440899 ZBTB7CA1YPR0 619 aa16.59■□□□□ 0.25
UBE2D4-204ENST00000440899 PSDA5PKW4 1024 aaPredicted RBP16.59■□□□□ 0.25
UBE2D4-204ENST00000440899 TTC21BQ7Z4L5 1316 aa16.59■□□□□ 0.25
UBE2D4-204ENST00000440899 APBA3O96018 575 aa16.58■□□□□ 0.24
UBE2D4-204ENST00000440899 CAMKK2Q96RR4 588 aa16.58■□□□□ 0.24
UBE2D4-204ENST00000440899 COL5A2P05997 1499 aaPredicted RBP16.58■□□□□ 0.24
UBE2D4-204ENST00000440899 EZH2Q15910 746 aaKnown RBP16.57■□□□□ 0.24
UBE2D4-204ENST00000440899 SLIT3O75094 1523 aa16.56■□□□□ 0.24
UBE2D4-204ENST00000440899 CRB1P82279 1406 aa16.56■□□□□ 0.24
UBE2D4-204ENST00000440899 TTC21AQ8NDW8 1320 aa16.56■□□□□ 0.24
UBE2D4-204ENST00000440899 C11orf95C9JLR9 678 aaPredicted RBP16.56■□□□□ 0.24
UBE2D4-204ENST00000440899 KCNH5Q8NCM2 988 aa16.56■□□□□ 0.24
UBE2D4-204ENST00000440899 PARD3Q8TEW0 1356 aa16.55■□□□□ 0.24
UBE2D4-204ENST00000440899 R3HDM1Q15032 1099 aaKnown RBP16.55■□□□□ 0.24
UBE2D4-204ENST00000440899 CARD11Q9BXL7 1154 aa16.55■□□□□ 0.24
UBE2D4-204ENST00000440899 SBNO2Q9Y2G9 1366 aa16.54■□□□□ 0.24
UBE2D4-204ENST00000440899 TNS1Q9HBL0 1735 aaKnown RBP16.54■□□□□ 0.24
UBE2D4-204ENST00000440899 TOM1L2Q6ZVM7 507 aa16.54■□□□□ 0.24
UBE2D4-204ENST00000440899 ARHGEF25Q86VW2 580 aa16.54■□□□□ 0.24
UBE2D4-204ENST00000440899 AXIN2Q9Y2T1 843 aa16.54■□□□□ 0.24
UBE2D4-204ENST00000440899 CPSF1Q10570 1443 aaKnown RBP16.53■□□□□ 0.24
UBE2D4-204ENST00000440899 KTN1Q86UP2 1357 aaKnown RBP16.53■□□□□ 0.24
UBE2D4-204ENST00000440899 PIK3C2AO00443 1686 aa16.53■□□□□ 0.24
UBE2D4-204ENST00000440899 WDR17Q8IZU2 1322 aa16.52■□□□□ 0.24
UBE2D4-204ENST00000440899 DDB1Q16531 1140 aa16.51■□□□□ 0.23
UBE2D4-204ENST00000440899 LRP5O75197 1615 aa16.51■□□□□ 0.23
UBE2D4-204ENST00000440899 TONSLQ96HA7 1378 aa16.51■□□□□ 0.23
UBE2D4-204ENST00000440899 SOX12O15370 315 aa16.5■□□□□ 0.23
UBE2D4-204ENST00000440899 CDCA7Q9BWT1 371 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms