RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 BLMP54132 1417 aaPredicted RBP25.57■■□□□ 1.68
SNX17-203ENST00000440760 WDR43Q15061 677 aaKnown RBP eCLIP25.57■■□□□ 1.68
SNX17-203ENST00000440760 SSH2Q76I76 1423 aa25.57■■□□□ 1.68
SNX17-203ENST00000440760 ADAMTS8Q9UP79 889 aa25.56■■□□□ 1.68
SNX17-203ENST00000440760 ZBED9Q6R2W3 1325 aa25.56■■□□□ 1.68
SNX17-203ENST00000440760 XIRP1Q702N8 1843 aaKnown RBP25.56■■□□□ 1.68
SNX17-203ENST00000440760 FBLN1P23142 703 aa25.56■■□□□ 1.68
SNX17-203ENST00000440760 MAP2P11137 1827 aaKnown RBP25.53■■□□□ 1.68
SNX17-203ENST00000440760 ZNF335Q9H4Z2 1342 aaPredicted RBP25.53■■□□□ 1.68
SNX17-203ENST00000440760 PIK3C2AO00443 1686 aa25.53■■□□□ 1.68
SNX17-203ENST00000440760 PHF8Q9UPP1 1060 aa25.53■■□□□ 1.68
SNX17-203ENST00000440760 OVOS2A0A0J9YW53 1432 aa25.51■■□□□ 1.67
SNX17-203ENST00000440760 OVOS2Q6IE36 1432 aa25.51■■□□□ 1.67
SNX17-203ENST00000440760 ESCO1Q5FWF5 840 aa25.51■■□□□ 1.67
SNX17-203ENST00000440760 COG3Q96JB2 828 aa25.51■■□□□ 1.67
SNX17-203ENST00000440760 COL3A1P02461 1466 aaPredicted RBP25.5■■□□□ 1.67
SNX17-203ENST00000440760 C19orf44Q9H6X5 657 aa25.5■■□□□ 1.67
SNX17-203ENST00000440760 ORAI2Q96SN7 254 aa25.49■■□□□ 1.67
SNX17-203ENST00000440760 INSRP06213 1382 aa25.48■■□□□ 1.67
SNX17-203ENST00000440760 CFAP53Q96M91 514 aa25.48■■□□□ 1.67
SNX17-203ENST00000440760 SALL2Q9Y467 1007 aaPredicted RBP25.47■■□□□ 1.67
SNX17-203ENST00000440760 C1orf167Q5SNV9 1468 aa25.47■■□□□ 1.67
SNX17-203ENST00000440760 LRRC7Q96NW7 1537 aa25.46■■□□□ 1.67
SNX17-203ENST00000440760 TTC21AQ8NDW8 1320 aa25.46■■□□□ 1.67
SNX17-203ENST00000440760 SCAF1Q9H7N4 1312 aaKnown RBP25.46■■□□□ 1.67
SNX17-203ENST00000440760 MARF1Q9Y4F3 1742 aaKnown RBP25.46■■□□□ 1.67
SNX17-203ENST00000440760 CCDC146Q8IYE0 955 aa25.45■■□□□ 1.67
SNX17-203ENST00000440760 POLKQ9UBT6 870 aa25.45■■□□□ 1.67
SNX17-203ENST00000440760 MST1RQ04912 1400 aa25.45■■□□□ 1.66
SNX17-203ENST00000440760 NCOA3Q9Y6Q9 1424 aa25.45■■□□□ 1.66
SNX17-203ENST00000440760 EMILIN1Q9Y6C2 1016 aa25.45■■□□□ 1.66
SNX17-203ENST00000440760 DCCP43146 1447 aa25.44■■□□□ 1.66
SNX17-203ENST00000440760 PPM1GO15355 546 aaPredicted RBP25.44■■□□□ 1.66
SNX17-203ENST00000440760 ATF3P18847 181 aa25.43■■□□□ 1.66
SNX17-203ENST00000440760 RRS1Q15050 365 aaKnown RBP25.43■■□□□ 1.66
SNX17-203ENST00000440760 KIF1AQ12756 1690 aa25.43■■□□□ 1.66
SNX17-203ENST00000440760 AATKQ6ZMQ8 1374 aa25.42■■□□□ 1.66
SNX17-203ENST00000440760 SMG6Q86US8 1419 aaKnown RBP25.42■■□□□ 1.66
SNX17-203ENST00000440760 MSH6P52701 1360 aa25.42■■□□□ 1.66
SNX17-203ENST00000440760 SOX12O15370 315 aa25.42■■□□□ 1.66
SNX17-203ENST00000440760 PAK3O75914 559 aaPredicted RBP25.42■■□□□ 1.66
SNX17-203ENST00000440760 NUTM2GQ5VZR2 741 aa25.41■■□□□ 1.66
SNX17-203ENST00000440760 XPCQ01831 940 aaPredicted RBP25.4■■□□□ 1.66
SNX17-203ENST00000440760 PNPLA6Q8IY17 1366 aa25.4■■□□□ 1.66
SNX17-203ENST00000440760 USP54Q70EL1 1684 aa25.39■■□□□ 1.66
SNX17-203ENST00000440760 CDK12Q9NYV4 1490 aaPredicted RBP25.39■■□□□ 1.66
SNX17-203ENST00000440760 FOXO3O43524 673 aa25.39■■□□□ 1.66
SNX17-203ENST00000440760 USP31Q70CQ4 1352 aa25.38■■□□□ 1.65
SNX17-203ENST00000440760 PEAK1Q9H792 1746 aa25.38■■□□□ 1.65
SNX17-203ENST00000440760 PSME1Q06323 249 aa25.38■■□□□ 1.65
SNX17-203ENST00000440760 GTF3C3Q9Y5Q9 886 aa25.38■■□□□ 1.65
SNX17-203ENST00000440760 TRPM3Q9HCF6 1732 aaPredicted RBP25.36■■□□□ 1.65
SNX17-203ENST00000440760 NLRP6P59044 892 aa25.36■■□□□ 1.65
SNX17-203ENST00000440760 ABTB2Q8N961 1025 aa25.36■■□□□ 1.65
SNX17-203ENST00000440760 U2SURPO15042 1029 aaKnown RBP25.35■■□□□ 1.65
SNX17-203ENST00000440760 U2AF1L5P0DN76 240 aaPredicted RBP25.35■■□□□ 1.65
SNX17-203ENST00000440760 U2AF1Q01081 240 aaKnown RBP eCLIP25.35■■□□□ 1.65
SNX17-203ENST00000440760 CADPS2Q86UW7 1296 aa25.35■■□□□ 1.65
SNX17-203ENST00000440760 DIAPH1O60610 1272 aaKnown RBP25.34■■□□□ 1.65
SNX17-203ENST00000440760 DMRT2Q9Y5R5 561 aa25.34■■□□□ 1.65
SNX17-203ENST00000440760 APAF1O14727 1248 aa25.32■■□□□ 1.64
SNX17-203ENST00000440760 DDX17Q92841 729 aaKnown RBP25.32■■□□□ 1.64
SNX17-203ENST00000440760 NUDCQ9Y266 331 aa25.31■■□□□ 1.64
SNX17-203ENST00000440760 IQSEC2Q5JU85 1478 aa25.31■■□□□ 1.64
SNX17-203ENST00000440760 MAP3K19Q56UN5 1328 aa25.28■■□□□ 1.64
SNX17-203ENST00000440760 KRT28Q7Z3Y7 464 aa25.27■■□□□ 1.64
SNX17-203ENST00000440760 RUNDC1Q96C34 613 aa25.27■■□□□ 1.64
SNX17-203ENST00000440760 ALS2Q96Q42 1657 aa25.26■■□□□ 1.63
SNX17-203ENST00000440760 PLEKHG5O94827 1062 aa25.25■■□□□ 1.63
SNX17-203ENST00000440760 IL13P35225 146 aa25.25■■□□□ 1.63
SNX17-203ENST00000440760 CDCA7LQ96GN5 454 aa25.25■■□□□ 1.63
SNX17-203ENST00000440760 LTN1O94822 1766 aa25.25■■□□□ 1.63
SNX17-203ENST00000440760 LMOD2Q6P5Q4 547 aa25.25■■□□□ 1.63
SNX17-203ENST00000440760 RRP7AQ9Y3A4 280 aaKnown RBP25.25■■□□□ 1.63
SNX17-203ENST00000440760 NFAT5O94916 1531 aa25.24■■□□□ 1.63
SNX17-203ENST00000440760 HSP90AB2PQ58FF8 381 aa25.23■■□□□ 1.63
SNX17-203ENST00000440760 TCP11L2Q8N4U5 519 aa25.22■■□□□ 1.63
SNX17-203ENST00000440760 ZNF521Q96K83 1311 aa25.22■■□□□ 1.63
SNX17-203ENST00000440760 SBNO1A3KN83 1393 aa25.22■■□□□ 1.63
SNX17-203ENST00000440760 BRINP3Q76B58 766 aa25.22■■□□□ 1.63
SNX17-203ENST00000440760 PELP1Q8IZL8 1130 aaKnown RBP25.22■■□□□ 1.63
SNX17-203ENST00000440760 HMOX1P09601 288 aa25.21■■□□□ 1.63
SNX17-203ENST00000440760 EIF4A2Q14240 407 aaKnown RBP25.21■■□□□ 1.63
SNX17-203ENST00000440760 NEUROD2Q15784 382 aa25.21■■□□□ 1.63
SNX17-203ENST00000440760 FLT4P35916 1363 aa25.21■■□□□ 1.63
SNX17-203ENST00000440760 PXDNQ92626 1479 aa25.21■■□□□ 1.63
SNX17-203ENST00000440760 PLEKHF1Q96S99 279 aa25.2■■□□□ 1.63
SNX17-203ENST00000440760 SLIT3O75094 1523 aa25.2■■□□□ 1.62
SNX17-203ENST00000440760 SLAIN2Q9P270 581 aa25.19■■□□□ 1.62
SNX17-203ENST00000440760 NPHP3Q7Z494 1330 aa25.19■■□□□ 1.62
SNX17-203ENST00000440760 LTBP4Q8N2S1 1624 aa25.19■■□□□ 1.62
SNX17-203ENST00000440760 RGPD1P0DJD0 1748 aa25.18■■□□□ 1.62
SNX17-203ENST00000440760 AMPHP49418 695 aa25.18■■□□□ 1.62
SNX17-203ENST00000440760 PDE3BQ13370 1112 aa25.18■■□□□ 1.62
SNX17-203ENST00000440760 RSPH6AQ9H0K4 717 aa25.18■■□□□ 1.62
SNX17-203ENST00000440760 SUPT16HQ9Y5B9 1047 aaKnown RBP25.18■■□□□ 1.62
SNX17-203ENST00000440760 PRKAR2BP31323 418 aa25.16■■□□□ 1.62
SNX17-203ENST00000440760 MAPK8IP3Q9UPT6 1336 aa25.16■■□□□ 1.62
SNX17-203ENST00000440760 MED1Q15648 1581 aaPredicted RBP25.16■■□□□ 1.62
SNX17-203ENST00000440760 TNS3Q68CZ2 1445 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms