RNA–Protein interactions for RNA: ENST00000440480.6

CDKN1C-204, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDKN1C, Length 1,811 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-204ENST00000440480 DCCP43146 1447 aa28.73■■■□□ 2.19
CDKN1C-204ENST00000440480 PELP1Q8IZL8 1130 aaKnown RBP28.71■■■□□ 2.19
CDKN1C-204ENST00000440480 LTBP4Q8N2S1 1624 aa28.71■■■□□ 2.19
CDKN1C-204ENST00000440480 TNNT2P45379 298 aaPredicted RBP28.71■■■□□ 2.19
CDKN1C-204ENST00000440480 ORAI2Q96SN7 254 aa28.71■■■□□ 2.19
CDKN1C-204ENST00000440480 USP6P35125 1406 aa28.7■■■□□ 2.18
CDKN1C-204ENST00000440480 ITSN1Q15811 1721 aa28.7■■■□□ 2.18
CDKN1C-204ENST00000440480 XIRP1Q702N8 1843 aaKnown RBP28.69■■■□□ 2.18
CDKN1C-204ENST00000440480 TTC21BQ7Z4L5 1316 aa28.69■■■□□ 2.18
CDKN1C-204ENST00000440480 NME9Q86XW9 330 aa28.67■■■□□ 2.18
CDKN1C-204ENST00000440480 RGPD8O14715 1765 aaPredicted RBP28.67■■■□□ 2.18
CDKN1C-204ENST00000440480 C1orf167Q5SNV9 1468 aa28.67■■■□□ 2.18
CDKN1C-204ENST00000440480 PSME1Q06323 249 aa28.66■■■□□ 2.18
CDKN1C-204ENST00000440480 PNISRQ8TF01 805 aaKnown RBP28.66■■■□□ 2.18
CDKN1C-204ENST00000440480 COG3Q96JB2 828 aa28.64■■■□□ 2.17
CDKN1C-204ENST00000440480 TTC21AQ8NDW8 1320 aa28.63■■■□□ 2.17
CDKN1C-204ENST00000440480 FOXO3O43524 673 aa28.63■■■□□ 2.17
CDKN1C-204ENST00000440480 MST1RQ04912 1400 aa28.63■■■□□ 2.17
CDKN1C-204ENST00000440480 AKAP12Q02952 1782 aa28.62■■■□□ 2.17
CDKN1C-204ENST00000440480 FKBP8Q14318 412 aa28.62■■■□□ 2.17
CDKN1C-204ENST00000440480 SSH2Q76I76 1423 aa28.62■■■□□ 2.17
CDKN1C-204ENST00000440480 MON2Q7Z3U7 1717 aa28.61■■■□□ 2.17
CDKN1C-204ENST00000440480 PAK3O75914 559 aaPredicted RBP28.6■■■□□ 2.17
CDKN1C-204ENST00000440480 ZRANB1Q9UGI0 708 aa28.6■■■□□ 2.17
CDKN1C-204ENST00000440480 SLAIN2Q9P270 581 aa28.59■■■□□ 2.17
CDKN1C-204ENST00000440480 MTHFSP49914 203 aa28.57■■■□□ 2.16
CDKN1C-204ENST00000440480 ABTB2Q8N961 1025 aa28.55■■■□□ 2.16
CDKN1C-204ENST00000440480 KRT28Q7Z3Y7 464 aa28.53■■■□□ 2.16
CDKN1C-204ENST00000440480 NLRP6P59044 892 aa28.53■■■□□ 2.16
CDKN1C-204ENST00000440480 XPCQ01831 940 aaPredicted RBP28.53■■■□□ 2.16
CDKN1C-204ENST00000440480 NRKQ7Z2Y5 1582 aa28.52■■■□□ 2.16
CDKN1C-204ENST00000440480 KIF20BQ96Q89 1820 aa28.51■■■□□ 2.16
CDKN1C-204ENST00000440480 CFAP53Q96M91 514 aa28.5■■■□□ 2.15
CDKN1C-204ENST00000440480 INSRP06213 1382 aa28.5■■■□□ 2.15
CDKN1C-204ENST00000440480 FBLN1P23142 703 aa28.5■■■□□ 2.15
CDKN1C-204ENST00000440480 BRINP3Q76B58 766 aa28.49■■■□□ 2.15
CDKN1C-204ENST00000440480 USP31Q70CQ4 1352 aa28.48■■■□□ 2.15
CDKN1C-204ENST00000440480 NPHP3Q7Z494 1330 aa28.48■■■□□ 2.15
CDKN1C-204ENST00000440480 NUTM2GQ5VZR2 741 aa28.48■■■□□ 2.15
CDKN1C-204ENST00000440480 WDR43Q15061 677 aaKnown RBP eCLIP28.47■■■□□ 2.15
CDKN1C-204ENST00000440480 POLKQ9UBT6 870 aa28.47■■■□□ 2.15
CDKN1C-204ENST00000440480 ANKRD26Q9UPS8 1709 aa28.47■■■□□ 2.15
CDKN1C-204ENST00000440480 OVOS2A0A0J9YW53 1432 aa28.47■■■□□ 2.15
CDKN1C-204ENST00000440480 OVOS2Q6IE36 1432 aa28.47■■■□□ 2.15
CDKN1C-204ENST00000440480 AATKQ6ZMQ8 1374 aa28.47■■■□□ 2.15
CDKN1C-204ENST00000440480 KIF1AQ12756 1690 aa28.46■■■□□ 2.15
CDKN1C-204ENST00000440480 PPM1GO15355 546 aaPredicted RBP28.46■■■□□ 2.15
CDKN1C-204ENST00000440480 ERICH6BQ5W0A0 696 aa28.46■■■□□ 2.15
CDKN1C-204ENST00000440480 DDX17Q92841 729 aaKnown RBP28.46■■■□□ 2.15
CDKN1C-204ENST00000440480 SMG6Q86US8 1419 aaKnown RBP28.44■■■□□ 2.14
CDKN1C-204ENST00000440480 LMOD2Q6P5Q4 547 aa28.44■■■□□ 2.14
CDKN1C-204ENST00000440480 SOX12O15370 315 aa28.42■■■□□ 2.14
CDKN1C-204ENST00000440480 RRS1Q15050 365 aaKnown RBP28.42■■■□□ 2.14
CDKN1C-204ENST00000440480 CERKQ8TCT0 537 aa28.42■■■□□ 2.14
CDKN1C-204ENST00000440480 ADAMTS8Q9UP79 889 aa28.41■■■□□ 2.14
CDKN1C-204ENST00000440480 EMILIN1Q9Y6C2 1016 aa28.41■■■□□ 2.14
CDKN1C-204ENST00000440480 NUDCQ9Y266 331 aa28.39■■■□□ 2.13
CDKN1C-204ENST00000440480 PIK3C2AO00443 1686 aa28.38■■■□□ 2.13
CDKN1C-204ENST00000440480 PNPLA6Q8IY17 1366 aa28.37■■■□□ 2.13
CDKN1C-204ENST00000440480 SBNO1A3KN83 1393 aa28.36■■■□□ 2.13
CDKN1C-204ENST00000440480 IQSEC2Q5JU85 1478 aa28.35■■■□□ 2.13
CDKN1C-204ENST00000440480 DIAPH1O60610 1272 aaKnown RBP28.34■■■□□ 2.13
CDKN1C-204ENST00000440480 KCNH5Q8NCM2 988 aa28.34■■■□□ 2.13
CDKN1C-204ENST00000440480 PDE3BQ13370 1112 aa28.32■■■□□ 2.12
CDKN1C-204ENST00000440480 SOS2Q07890 1332 aaPredicted RBP28.32■■■□□ 2.12
CDKN1C-204ENST00000440480 TOM1O60784 492 aa28.32■■■□□ 2.12
CDKN1C-204ENST00000440480 MAP3K19Q56UN5 1328 aa28.31■■■□□ 2.12
CDKN1C-204ENST00000440480 PXDNQ92626 1479 aa28.3■■■□□ 2.12
CDKN1C-204ENST00000440480 SPATA31A3Q5VYP0 1347 aa28.3■■■□□ 2.12
CDKN1C-204ENST00000440480 UBAP1LF5GYI3 381 aa28.3■■■□□ 2.12
CDKN1C-204ENST00000440480 PLEKHG5O94827 1062 aa28.3■■■□□ 2.12
CDKN1C-204ENST00000440480 BLMP54132 1417 aaPredicted RBP28.29■■■□□ 2.12
CDKN1C-204ENST00000440480 U2SURPO15042 1029 aaKnown RBP28.29■■■□□ 2.12
CDKN1C-204ENST00000440480 GCP02774 474 aa28.29■■■□□ 2.12
CDKN1C-204ENST00000440480 U2AF1L5P0DN76 240 aaPredicted RBP28.29■■■□□ 2.12
CDKN1C-204ENST00000440480 AMPHP49418 695 aa28.29■■■□□ 2.12
CDKN1C-204ENST00000440480 U2AF1Q01081 240 aaKnown RBP eCLIP28.29■■■□□ 2.12
CDKN1C-204ENST00000440480 TRPM3Q9HCF6 1732 aaPredicted RBP28.28■■■□□ 2.12
CDKN1C-204ENST00000440480 TNS3Q68CZ2 1445 aa28.27■■■□□ 2.12
CDKN1C-204ENST00000440480 MAP2P11137 1827 aaKnown RBP28.27■■■□□ 2.12
CDKN1C-204ENST00000440480 CDK12Q9NYV4 1490 aaPredicted RBP28.27■■■□□ 2.12
CDKN1C-204ENST00000440480 PIP4K2BP78356 416 aa28.26■■■□□ 2.11
CDKN1C-204ENST00000440480 ARHGEF10O15013 1369 aa28.26■■■□□ 2.11
CDKN1C-204ENST00000440480 COL3A1P02461 1466 aaPredicted RBP28.25■■■□□ 2.11
CDKN1C-204ENST00000440480 USP19O94966 1318 aa28.25■■■□□ 2.11
CDKN1C-204ENST00000440480 HSP90AB2PQ58FF8 381 aa28.25■■■□□ 2.11
CDKN1C-204ENST00000440480 ROBO1Q9Y6N7 1651 aa28.24■■■□□ 2.11
CDKN1C-204ENST00000440480 USP54Q70EL1 1684 aa28.23■■■□□ 2.11
CDKN1C-204ENST00000440480 IL13P35225 146 aa28.23■■■□□ 2.11
CDKN1C-204ENST00000440480 FLT4P35916 1363 aa28.23■■■□□ 2.11
CDKN1C-204ENST00000440480 SENP3-EIF4A1A0A087X0R7 540 aa28.22■■■□□ 2.11
CDKN1C-204ENST00000440480 CCDC146Q8IYE0 955 aa28.22■■■□□ 2.11
CDKN1C-204ENST00000440480 KIF24Q5T7B8 1368 aa28.22■■■□□ 2.11
CDKN1C-204ENST00000440480 ALS2Q96Q42 1657 aa28.19■■■□□ 2.1
CDKN1C-204ENST00000440480 HOXC9P31274 260 aa28.19■■■□□ 2.1
CDKN1C-204ENST00000440480 EIF4A2Q14240 407 aaKnown RBP28.19■■■□□ 2.1
CDKN1C-204ENST00000440480 MARF1Q9Y4F3 1742 aaKnown RBP28.19■■■□□ 2.1
CDKN1C-204ENST00000440480 ZBTB7CA1YPR0 619 aa28.18■■■□□ 2.1
CDKN1C-204ENST00000440480 ARHGEF25Q86VW2 580 aa28.18■■■□□ 2.1
CDKN1C-204ENST00000440480 CABLES1Q8TDN4 633 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms