RNA–Protein interactions for RNA: ENST00000440431.6

SCN3A-204, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 4,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-204ENST00000440431 CGNL1Q0VF96 1302 aa5.82□□□□□ -1.48
SCN3A-204ENST00000440431 FMN2Q9NZ56 1722 aa5.82□□□□□ -1.48
SCN3A-204ENST00000440431 ATF3P18847 181 aa5.82□□□□□ -1.48
SCN3A-204ENST00000440431 AMPHP49418 695 aa5.82□□□□□ -1.48
SCN3A-204ENST00000440431 BRD4O60885 1362 aaPredicted RBP5.82□□□□□ -1.48
SCN3A-204ENST00000440431 NLRP13Q86W25 1043 aa5.82□□□□□ -1.48
SCN3A-204ENST00000440431 SLC12A5Q9H2X9 1139 aa5.82□□□□□ -1.48
SCN3A-204ENST00000440431 A0A1W2PP64 1363 aa5.82□□□□□ -1.48
SCN3A-204ENST00000440431 WAPLQ7Z5K2 1190 aa5.82□□□□□ -1.48
SCN3A-204ENST00000440431 SIRT1Q96EB6 747 aa5.82□□□□□ -1.48
SCN3A-204ENST00000440431 COG3Q96JB2 828 aa5.82□□□□□ -1.48
SCN3A-204ENST00000440431 PRR36Q9H6K5 1346 aa5.81□□□□□ -1.48
SCN3A-204ENST00000440431 PDE3BQ13370 1112 aa5.81□□□□□ -1.48
SCN3A-204ENST00000440431 TMX4Q9H1E5 349 aaPredicted RBP5.81□□□□□ -1.48
SCN3A-204ENST00000440431 LAS1LQ9Y4W2 734 aaKnown RBP5.81□□□□□ -1.48
SCN3A-204ENST00000440431 SETD1BQ9UPS6 1966 aaKnown RBP5.81□□□□□ -1.48
SCN3A-204ENST00000440431 INSRP06213 1382 aa5.81□□□□□ -1.48
SCN3A-204ENST00000440431 MYBBP1AQ9BQG0 1328 aaKnown RBP5.81□□□□□ -1.48
SCN3A-204ENST00000440431 TNNT2P45379 298 aaPredicted RBP5.81□□□□□ -1.48
SCN3A-204ENST00000440431 PTCH1Q13635 1447 aa5.81□□□□□ -1.48
SCN3A-204ENST00000440431 PEAK1Q9H792 1746 aa5.81□□□□□ -1.48
SCN3A-204ENST00000440431 U2AF1L5P0DN76 240 aaPredicted RBP5.81□□□□□ -1.48
SCN3A-204ENST00000440431 U2AF1Q01081 240 aaKnown RBP eCLIP5.81□□□□□ -1.48
SCN3A-204ENST00000440431 ANKLE2Q86XL3 938 aa5.81□□□□□ -1.48
SCN3A-204ENST00000440431 PRAM1Q96QH2 718 aa5.81□□□□□ -1.48
SCN3A-204ENST00000440431 ANKRD36BQ8N2N9 1353 aa5.81□□□□□ -1.48
SCN3A-204ENST00000440431 ITSN1Q15811 1721 aa5.81□□□□□ -1.48
SCN3A-204ENST00000440431 NEUROD2Q15784 382 aa5.8□□□□□ -1.48
SCN3A-204ENST00000440431 PSME1Q06323 249 aa5.8□□□□□ -1.48
SCN3A-204ENST00000440431 ANP32BQ92688 251 aaKnown RBP5.8□□□□□ -1.48
SCN3A-204ENST00000440431 RGPD1P0DJD0 1748 aa5.8□□□□□ -1.48
SCN3A-204ENST00000440431 IQSEC2Q5JU85 1478 aa5.8□□□□□ -1.48
SCN3A-204ENST00000440431 NCKAP5LQ9HCH0 1330 aa5.8□□□□□ -1.48
SCN3A-204ENST00000440431 ERICH6BQ5W0A0 696 aa5.8□□□□□ -1.48
SCN3A-204ENST00000440431 TXNDC2Q86VQ3 553 aa5.8□□□□□ -1.48
SCN3A-204ENST00000440431 DMRT2Q9Y5R5 561 aa5.8□□□□□ -1.48
SCN3A-204ENST00000440431 PIK3C2AO00443 1686 aa5.8□□□□□ -1.48
SCN3A-204ENST00000440431 NSD3Q9BZ95 1437 aa5.8□□□□□ -1.48
SCN3A-204ENST00000440431 PPP2R1AP30153 589 aa5.8□□□□□ -1.48
SCN3A-204ENST00000440431 STK31Q9BXU1 1019 aa5.8□□□□□ -1.48
SCN3A-204ENST00000440431 CABP2Q9NPB3 220 aa5.8□□□□□ -1.48
SCN3A-204ENST00000440431 CCDC9Q9Y3X0 531 aaKnown RBP5.8□□□□□ -1.48
SCN3A-204ENST00000440431 MAP2P11137 1827 aaKnown RBP5.79□□□□□ -1.48
SCN3A-204ENST00000440431 ZNF521Q96K83 1311 aa5.79□□□□□ -1.48
SCN3A-204ENST00000440431 BECN1Q14457 450 aa5.79□□□□□ -1.48
SCN3A-204ENST00000440431 GOLGA2Q08379 1002 aa5.79□□□□□ -1.48
SCN3A-204ENST00000440431 SOX12O15370 315 aa5.78□□□□□ -1.48
SCN3A-204ENST00000440431 EVA1CP58658 441 aa5.78□□□□□ -1.48
SCN3A-204ENST00000440431 OS9Q13438 667 aaPredicted RBP5.78□□□□□ -1.48
SCN3A-204ENST00000440431 SMG6Q86US8 1419 aaKnown RBP5.78□□□□□ -1.48
SCN3A-204ENST00000440431 SUPT16HQ9Y5B9 1047 aaKnown RBP5.78□□□□□ -1.48
SCN3A-204ENST00000440431 KDM4FA0A1W2PPD8 638 aa5.78□□□□□ -1.48
SCN3A-204ENST00000440431 DDRGK1Q96HY6 314 aa5.78□□□□□ -1.48
SCN3A-204ENST00000440431 TRPM3Q9HCF6 1732 aaPredicted RBP5.78□□□□□ -1.48
SCN3A-204ENST00000440431 PNPLA6Q8IY17 1366 aa5.78□□□□□ -1.48
SCN3A-204ENST00000440431 ZNF692Q9BU19 519 aaPredicted RBP5.77□□□□□ -1.49
SCN3A-204ENST00000440431 RNF123Q5XPI4 1314 aa5.77□□□□□ -1.49
SCN3A-204ENST00000440431 ZBED9Q6R2W3 1325 aa5.77□□□□□ -1.49
SCN3A-204ENST00000440431 PROSER2Q86WR7 435 aaPredicted RBP5.77□□□□□ -1.49
SCN3A-204ENST00000440431 CDK19Q9BWU1 502 aa5.77□□□□□ -1.49
SCN3A-204ENST00000440431 CRYBG1Q9Y4K1 1723 aa5.77□□□□□ -1.49
SCN3A-204ENST00000440431 LMTK3Q96Q04 1460 aa5.77□□□□□ -1.49
SCN3A-204ENST00000440431 TBX22Q9Y458 520 aa5.77□□□□□ -1.49
SCN3A-204ENST00000440431 POLR3AO14802 1390 aaPredicted RBP5.76□□□□□ -1.49
SCN3A-204ENST00000440431 NINLQ9Y2I6 1382 aa5.76□□□□□ -1.49
SCN3A-204ENST00000440431 FYB1O15117 783 aa5.76□□□□□ -1.49
SCN3A-204ENST00000440431 C1orf141Q5JVX7 400 aa5.76□□□□□ -1.49
SCN3A-204ENST00000440431 MINK1Q8N4C8 1332 aaPredicted RBP5.76□□□□□ -1.49
SCN3A-204ENST00000440431 WASLO00401 505 aaPredicted RBP5.76□□□□□ -1.49
SCN3A-204ENST00000440431 HMMRO75330 724 aa5.76□□□□□ -1.49
SCN3A-204ENST00000440431 PPP4R2Q9NY27 417 aa5.76□□□□□ -1.49
SCN3A-204ENST00000440431 NCLP19338 710 aaKnown RBP5.75□□□□□ -1.49
SCN3A-204ENST00000440431 SLC26A8Q96RN1 970 aa5.75□□□□□ -1.49
SCN3A-204ENST00000440431 OVOS2A0A0J9YW53 1432 aa5.75□□□□□ -1.49
SCN3A-204ENST00000440431 OVOS2Q6IE36 1432 aa5.75□□□□□ -1.49
SCN3A-204ENST00000440431 PPIP5K1Q6PFW1 1433 aa5.75□□□□□ -1.49
SCN3A-204ENST00000440431 PIK3R4Q99570 1358 aa5.75□□□□□ -1.49
SCN3A-204ENST00000440431 FRAT1Q92837 279 aaPredicted RBP5.75□□□□□ -1.49
SCN3A-204ENST00000440431 ADAMTS8Q9UP79 889 aa5.75□□□□□ -1.49
SCN3A-204ENST00000440431 PHRF1Q9P1Y6 1649 aaKnown RBP5.75□□□□□ -1.49
SCN3A-204ENST00000440431 DLG5Q8TDM6 1919 aa5.74□□□□□ -1.49
SCN3A-204ENST00000440431 ATAD2Q6PL18 1390 aa5.74□□□□□ -1.49
SCN3A-204ENST00000440431 GOLGA6L22H0YM25 854 aa5.74□□□□□ -1.49
SCN3A-204ENST00000440431 TEFQ10587 303 aa5.74□□□□□ -1.49
SCN3A-204ENST00000440431 TRMT2AQ8IZ69 625 aaKnown RBP5.74□□□□□ -1.49
SCN3A-204ENST00000440431 CABP1Q9NZU7 370 aa5.74□□□□□ -1.49
SCN3A-204ENST00000440431 LRRC7Q96NW7 1537 aa5.74□□□□□ -1.49
SCN3A-204ENST00000440431 FBLN1P23142 703 aa5.74□□□□□ -1.49
SCN3A-204ENST00000440431 MEX3CQ5U5Q3 659 aaKnown RBP5.74□□□□□ -1.49
SCN3A-204ENST00000440431 SPINK5Q9NQ38 1064 aaPredicted RBP5.74□□□□□ -1.49
SCN3A-204ENST00000440431 ZRANB1Q9UGI0 708 aa5.74□□□□□ -1.49
SCN3A-204ENST00000440431 ALS2Q96Q42 1657 aa5.73□□□□□ -1.49
SCN3A-204ENST00000440431 SENP3-EIF4A1A0A087X0R7 540 aa5.73□□□□□ -1.49
SCN3A-204ENST00000440431 DIAPH1O60610 1272 aaKnown RBP5.73□□□□□ -1.49
SCN3A-204ENST00000440431 KCNA6P17658 529 aa5.73□□□□□ -1.49
SCN3A-204ENST00000440431 MCCP23508 829 aa5.73□□□□□ -1.49
SCN3A-204ENST00000440431 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.73□□□□□ -1.49
SCN3A-204ENST00000440431 NSD2O96028 1365 aa5.73□□□□□ -1.49
SCN3A-204ENST00000440431 RAPGEF4Q8WZA2 1011 aa5.73□□□□□ -1.49
SCN3A-204ENST00000440431 PLEKHF1Q96S99 279 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms