RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 PAK3O75914 559 aaPredicted RBP20.07■□□□□ 0.8
TNFRSF1A-204ENST00000440083 USP6P35125 1406 aa20.06■□□□□ 0.8
TNFRSF1A-204ENST00000440083 SLC12A5Q9H2X9 1139 aa20.06■□□□□ 0.8
TNFRSF1A-204ENST00000440083 ANP32CO43423 234 aa20.05■□□□□ 0.8
TNFRSF1A-204ENST00000440083 CPSF1Q10570 1443 aaKnown RBP20.04■□□□□ 0.8
TNFRSF1A-204ENST00000440083 ABCA3Q99758 1704 aa20.04■□□□□ 0.8
TNFRSF1A-204ENST00000440083 MON2Q7Z3U7 1717 aa20.03■□□□□ 0.8
TNFRSF1A-204ENST00000440083 NUTM2GQ5VZR2 741 aa20.03■□□□□ 0.8
TNFRSF1A-204ENST00000440083 CABLES1Q8TDN4 633 aa20.03■□□□□ 0.8
TNFRSF1A-204ENST00000440083 PUS7Q96PZ0 661 aaKnown RBP20.03■□□□□ 0.8
TNFRSF1A-204ENST00000440083 ARHGEF10O15013 1369 aa20.03■□□□□ 0.8
TNFRSF1A-204ENST00000440083 NRKQ7Z2Y5 1582 aa20.03■□□□□ 0.8
TNFRSF1A-204ENST00000440083 MYOM1P52179 1685 aa20.03■□□□□ 0.8
TNFRSF1A-204ENST00000440083 KIF7Q2M1P5 1343 aa20.02■□□□□ 0.8
TNFRSF1A-204ENST00000440083 SSH2Q76I76 1423 aa20.02■□□□□ 0.8
TNFRSF1A-204ENST00000440083 SOCS7O14512 581 aa20.02■□□□□ 0.8
TNFRSF1A-204ENST00000440083 SLC24A1O60721 1099 aa20.02■□□□□ 0.8
TNFRSF1A-204ENST00000440083 ADAMTS2O95450 1211 aa20.02■□□□□ 0.8
TNFRSF1A-204ENST00000440083 POLR3GLQ9BT43 218 aa20.02■□□□□ 0.8
TNFRSF1A-204ENST00000440083 A0A1W2PP64 1363 aa20.01■□□□□ 0.79
TNFRSF1A-204ENST00000440083 KTN1Q86UP2 1357 aaKnown RBP20.01■□□□□ 0.79
TNFRSF1A-204ENST00000440083 C11orf95C9JLR9 678 aaPredicted RBP20.01■□□□□ 0.79
TNFRSF1A-204ENST00000440083 CENPBP07199 599 aaPredicted RBP20.01■□□□□ 0.79
TNFRSF1A-204ENST00000440083 MEX3CQ5U5Q3 659 aaKnown RBP20■□□□□ 0.79
TNFRSF1A-204ENST00000440083 PIK3C2AO00443 1686 aa20■□□□□ 0.79
TNFRSF1A-204ENST00000440083 CRYBG1Q9Y4K1 1723 aa19.99■□□□□ 0.79
TNFRSF1A-204ENST00000440083 CDCA8Q53HL2 280 aa19.98■□□□□ 0.79
TNFRSF1A-204ENST00000440083 TTC21BQ7Z4L5 1316 aa19.98■□□□□ 0.79
TNFRSF1A-204ENST00000440083 NINLQ9Y2I6 1382 aa19.97■□□□□ 0.79
TNFRSF1A-204ENST00000440083 HDGFL2Q7Z4V5 671 aaPredicted RBP19.97■□□□□ 0.79
TNFRSF1A-204ENST00000440083 YTHDC1Q96MU7 727 aaKnown RBP19.97■□□□□ 0.79
TNFRSF1A-204ENST00000440083 PHRF1Q9P1Y6 1649 aaKnown RBP19.96■□□□□ 0.79
TNFRSF1A-204ENST00000440083 ABTB2Q8N961 1025 aa19.96■□□□□ 0.79
TNFRSF1A-204ENST00000440083 C8orf37Q96NL8 207 aa19.96■□□□□ 0.79
TNFRSF1A-204ENST00000440083 ZNF692Q9BU19 519 aaPredicted RBP19.96■□□□□ 0.79
TNFRSF1A-204ENST00000440083 PHF23Q9BUL5 403 aaPredicted RBP19.96■□□□□ 0.79
TNFRSF1A-204ENST00000440083 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.95■□□□□ 0.78
TNFRSF1A-204ENST00000440083 TERF2IPQ9NYB0 399 aa19.95■□□□□ 0.78
TNFRSF1A-204ENST00000440083 MARF1Q9Y4F3 1742 aaKnown RBP19.95■□□□□ 0.78
TNFRSF1A-204ENST00000440083 BRD4O60885 1362 aaPredicted RBP19.95■□□□□ 0.78
TNFRSF1A-204ENST00000440083 ANKRD36BQ8N2N9 1353 aa19.95■□□□□ 0.78
TNFRSF1A-204ENST00000440083 HAP1P54257 671 aaPredicted RBP19.94■□□□□ 0.78
TNFRSF1A-204ENST00000440083 RGS17Q9UGC6 210 aaPredicted RBP19.94■□□□□ 0.78
TNFRSF1A-204ENST00000440083 ZRANB1Q9UGI0 708 aa19.94■□□□□ 0.78
TNFRSF1A-204ENST00000440083 EDC4Q6P2E9 1401 aaKnown RBP19.93■□□□□ 0.78
TNFRSF1A-204ENST00000440083 ILDR2Q71H61 639 aa19.93■□□□□ 0.78
TNFRSF1A-204ENST00000440083 NME9Q86XW9 330 aa19.92■□□□□ 0.78
TNFRSF1A-204ENST00000440083 USP19O94966 1318 aa19.92■□□□□ 0.78
TNFRSF1A-204ENST00000440083 CCER2I3L3R5 266 aa19.91■□□□□ 0.78
TNFRSF1A-204ENST00000440083 AFF2P51816 1311 aa19.91■□□□□ 0.78
TNFRSF1A-204ENST00000440083 TTC21AQ8NDW8 1320 aa19.91■□□□□ 0.78
TNFRSF1A-204ENST00000440083 NLRP6P59044 892 aa19.9■□□□□ 0.78
TNFRSF1A-204ENST00000440083 NGLY1Q96IV0 654 aa19.89■□□□□ 0.77
TNFRSF1A-204ENST00000440083 SLIT3O75094 1523 aa19.88■□□□□ 0.77
TNFRSF1A-204ENST00000440083 NLRP13Q86W25 1043 aa19.88■□□□□ 0.77
TNFRSF1A-204ENST00000440083 CARD14Q9BXL6 1004 aa19.88■□□□□ 0.77
TNFRSF1A-204ENST00000440083 NSD3Q9BZ95 1437 aa19.87■□□□□ 0.77
TNFRSF1A-204ENST00000440083 PLCH1Q4KWH8 1693 aa19.87■□□□□ 0.77
TNFRSF1A-204ENST00000440083 KIAA0232Q92628 1395 aa19.86■□□□□ 0.77
TNFRSF1A-204ENST00000440083 ZC3H6P61129 1189 aaKnown RBP19.86■□□□□ 0.77
TNFRSF1A-204ENST00000440083 POTEAQ6S8J7 498 aa19.86■□□□□ 0.77
TNFRSF1A-204ENST00000440083 USP54Q70EL1 1684 aa19.86■□□□□ 0.77
TNFRSF1A-204ENST00000440083 FAM83GA6ND36 823 aa19.85■□□□□ 0.77
TNFRSF1A-204ENST00000440083 SOX12O15370 315 aa19.85■□□□□ 0.77
TNFRSF1A-204ENST00000440083 USP31Q70CQ4 1352 aa19.84■□□□□ 0.77
TNFRSF1A-204ENST00000440083 GCP02774 474 aa19.84■□□□□ 0.77
TNFRSF1A-204ENST00000440083 CHRNA2Q15822 529 aa19.84■□□□□ 0.77
TNFRSF1A-204ENST00000440083 OVOS2A0A0J9YW53 1432 aa19.84■□□□□ 0.77
TNFRSF1A-204ENST00000440083 OVOS2Q6IE36 1432 aa19.84■□□□□ 0.77
TNFRSF1A-204ENST00000440083 KIF20BQ96Q89 1820 aa19.83■□□□□ 0.77
TNFRSF1A-204ENST00000440083 SLIT2O94813 1529 aa19.83■□□□□ 0.77
TNFRSF1A-204ENST00000440083 NFAT5O94916 1531 aa19.83■□□□□ 0.77
TNFRSF1A-204ENST00000440083 PANK3Q9H999 370 aa19.83■□□□□ 0.77
TNFRSF1A-204ENST00000440083 COL14A1Q05707 1796 aaKnown RBP19.83■□□□□ 0.76
TNFRSF1A-204ENST00000440083 BCL9LQ86UU0 1499 aa19.82■□□□□ 0.76
TNFRSF1A-204ENST00000440083 ZBTB7CA1YPR0 619 aa19.82■□□□□ 0.76
TNFRSF1A-204ENST00000440083 FNBP4Q8N3X1 1017 aaPredicted RBP19.82■□□□□ 0.76
TNFRSF1A-204ENST00000440083 PRDM11Q9NQV5 511 aa19.82■□□□□ 0.76
TNFRSF1A-204ENST00000440083 USP21Q9UK80 565 aa19.82■□□□□ 0.76
TNFRSF1A-204ENST00000440083 GGNBP2Q9H3C7 697 aa19.81■□□□□ 0.76
TNFRSF1A-204ENST00000440083 NRAPQ86VF7 1730 aa19.8■□□□□ 0.76
TNFRSF1A-204ENST00000440083 ZNF772Q68DY9 489 aaPredicted RBP19.8■□□□□ 0.76
TNFRSF1A-204ENST00000440083 FYB1O15117 783 aa19.79■□□□□ 0.76
TNFRSF1A-204ENST00000440083 CPDO75976 1380 aa19.79■□□□□ 0.76
TNFRSF1A-204ENST00000440083 NWD2Q9ULI1 1742 aa19.79■□□□□ 0.76
TNFRSF1A-204ENST00000440083 BTG4Q9NY30 223 aa19.78■□□□□ 0.76
TNFRSF1A-204ENST00000440083 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.78■□□□□ 0.76
TNFRSF1A-204ENST00000440083 LMO7Q8WWI1 1683 aa19.78■□□□□ 0.76
TNFRSF1A-204ENST00000440083 ATRNO75882 1429 aa19.77■□□□□ 0.76
TNFRSF1A-204ENST00000440083 FBLN1P23142 703 aa19.76■□□□□ 0.75
TNFRSF1A-204ENST00000440083 UNC5CLQ8IV45 518 aa19.76■□□□□ 0.75
TNFRSF1A-204ENST00000440083 KCNH5Q8NCM2 988 aa19.76■□□□□ 0.75
TNFRSF1A-204ENST00000440083 COG3Q96JB2 828 aa19.76■□□□□ 0.75
TNFRSF1A-204ENST00000440083 QTRT2Q9H974 415 aaKnown RBP19.76■□□□□ 0.75
TNFRSF1A-204ENST00000440083 CAMTA1Q9Y6Y1 1673 aa19.75■□□□□ 0.75
TNFRSF1A-204ENST00000440083 PRKRIP1Q9H875 184 aaPredicted RBP19.75■□□□□ 0.75
TNFRSF1A-204ENST00000440083 COL18A1P39060 1754 aa19.75■□□□□ 0.75
TNFRSF1A-204ENST00000440083 LTN1O94822 1766 aa19.74■□□□□ 0.75
TNFRSF1A-204ENST00000440083 CGNL1Q0VF96 1302 aa19.74■□□□□ 0.75
TNFRSF1A-204ENST00000440083 ARHGEF25Q86VW2 580 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms