RNA–Protein interactions for RNA: ENST00000440053.1

VIL1-204, Transcript of villin 1, humanhuman

TSL 1 (best) BASIC

Gene VIL1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-204ENST00000440053 POLR3AO14802 1390 aaPredicted RBP29.62■■■□□ 2.33
VIL1-204ENST00000440053 ALS2Q96Q42 1657 aa29.61■■■□□ 2.33
VIL1-204ENST00000440053 QRICH2Q9H0J4 1663 aa29.6■■■□□ 2.33
VIL1-204ENST00000440053 ITSN1Q15811 1721 aa29.59■■■□□ 2.33
VIL1-204ENST00000440053 CABP1Q9NZU7 370 aa29.59■■■□□ 2.33
VIL1-204ENST00000440053 PPIP5K1Q6PFW1 1433 aa29.58■■■□□ 2.33
VIL1-204ENST00000440053 TOPAZ1Q8N9V7 1692 aa29.58■■■□□ 2.33
VIL1-204ENST00000440053 ABCA3Q99758 1704 aa29.58■■■□□ 2.33
VIL1-204ENST00000440053 CARD11Q9BXL7 1154 aa29.57■■■□□ 2.32
VIL1-204ENST00000440053 EVC2Q86UK5 1308 aa29.55■■■□□ 2.32
VIL1-204ENST00000440053 BTG4Q9NY30 223 aa29.53■■■□□ 2.32
VIL1-204ENST00000440053 RALGAPBQ86X10 1494 aa29.52■■■□□ 2.32
VIL1-204ENST00000440053 ABTB2Q8N961 1025 aa29.52■■■□□ 2.32
VIL1-204ENST00000440053 CCDC9Q9Y3X0 531 aaKnown RBP29.52■■■□□ 2.32
VIL1-204ENST00000440053 VPS72Q15906 364 aa29.51■■■□□ 2.31
VIL1-204ENST00000440053 ZC3H6P61129 1189 aaKnown RBP29.49■■■□□ 2.31
VIL1-204ENST00000440053 GLI3P10071 1580 aa29.49■■■□□ 2.31
VIL1-204ENST00000440053 PCGF6Q9BYE7 350 aa29.48■■■□□ 2.31
VIL1-204ENST00000440053 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.48■■■□□ 2.31
VIL1-204ENST00000440053 PLCH1Q4KWH8 1693 aa29.48■■■□□ 2.31
VIL1-204ENST00000440053 CHRNA2Q15822 529 aa29.48■■■□□ 2.31
VIL1-204ENST00000440053 PRDM11Q9NQV5 511 aa29.47■■■□□ 2.31
VIL1-204ENST00000440053 CRYBG1Q9Y4K1 1723 aa29.46■■■□□ 2.31
VIL1-204ENST00000440053 KIAA0232Q92628 1395 aa29.45■■■□□ 2.3
VIL1-204ENST00000440053 SEPT12Q8IYM1 358 aa29.42■■■□□ 2.3
VIL1-204ENST00000440053 NWD2Q9ULI1 1742 aa29.42■■■□□ 2.3
VIL1-204ENST00000440053 ATAD2Q6PL18 1390 aa29.41■■■□□ 2.3
VIL1-204ENST00000440053 USP6P35125 1406 aa29.41■■■□□ 2.3
VIL1-204ENST00000440053 NLRP13Q86W25 1043 aa29.4■■■□□ 2.3
VIL1-204ENST00000440053 COL14A1Q05707 1796 aaKnown RBP29.39■■■□□ 2.3
VIL1-204ENST00000440053 ONECUT3O60422 494 aaPredicted RBP29.39■■■□□ 2.3
VIL1-204ENST00000440053 PHRF1Q9P1Y6 1649 aaKnown RBP29.37■■■□□ 2.29
VIL1-204ENST00000440053 GCP02774 474 aa29.37■■■□□ 2.29
VIL1-204ENST00000440053 NLRP6P59044 892 aa29.37■■■□□ 2.29
VIL1-204ENST00000440053 FAM98CQ17RN3 349 aaKnown RBP29.37■■■□□ 2.29
VIL1-204ENST00000440053 USP19O94966 1318 aa29.37■■■□□ 2.29
VIL1-204ENST00000440053 NRAPQ86VF7 1730 aa29.36■■■□□ 2.29
VIL1-204ENST00000440053 STRN4Q9NRL3 753 aa29.36■■■□□ 2.29
VIL1-204ENST00000440053 SSH2Q76I76 1423 aa29.36■■■□□ 2.29
VIL1-204ENST00000440053 ZNF692Q9BU19 519 aaPredicted RBP29.36■■■□□ 2.29
VIL1-204ENST00000440053 ST20-MTHFSA0A0A6YYL1 179 aa29.35■■■□□ 2.29
VIL1-204ENST00000440053 SBNO2Q9Y2G9 1366 aa29.34■■■□□ 2.29
VIL1-204ENST00000440053 SPATA31A5Q5VU36 1347 aa29.34■■■□□ 2.29
VIL1-204ENST00000440053 TTC21BQ7Z4L5 1316 aa29.34■■■□□ 2.29
VIL1-204ENST00000440053 SPATA31A7Q8IWB4 1347 aa29.34■■■□□ 2.29
VIL1-204ENST00000440053 BRD4O60885 1362 aaPredicted RBP29.34■■■□□ 2.29
VIL1-204ENST00000440053 A0A0G2JS52 829 aa29.33■■■□□ 2.29
VIL1-204ENST00000440053 MYT1Q01538 1121 aa29.33■■■□□ 2.29
VIL1-204ENST00000440053 EP400Q96L91 3159 aa29.32■■■□□ 2.28
VIL1-204ENST00000440053 ZBTB7CA1YPR0 619 aa29.31■■■□□ 2.28
VIL1-204ENST00000440053 TMC1Q8TDI8 760 aa29.31■■■□□ 2.28
VIL1-204ENST00000440053 SLC12A5Q9H2X9 1139 aa29.31■■■□□ 2.28
VIL1-204ENST00000440053 TESK2Q96S53 571 aa29.3■■■□□ 2.28
VIL1-204ENST00000440053 NRKQ7Z2Y5 1582 aa29.3■■■□□ 2.28
VIL1-204ENST00000440053 CPSF1Q10570 1443 aaKnown RBP29.3■■■□□ 2.28
VIL1-204ENST00000440053 EVA1CP58658 441 aa29.29■■■□□ 2.28
VIL1-204ENST00000440053 BRWD3Q6RI45 1802 aa29.29■■■□□ 2.28
VIL1-204ENST00000440053 KTN1Q86UP2 1357 aaKnown RBP29.28■■■□□ 2.28
VIL1-204ENST00000440053 KRT27Q7Z3Y8 459 aa29.28■■■□□ 2.28
VIL1-204ENST00000440053 CPDO75976 1380 aa29.27■■■□□ 2.28
VIL1-204ENST00000440053 USP35Q9P2H5 1018 aa29.27■■■□□ 2.28
VIL1-204ENST00000440053 ZRANB1Q9UGI0 708 aa29.27■■■□□ 2.28
VIL1-204ENST00000440053 SPATA31A1Q5TZJ5 1347 aa29.26■■■□□ 2.27
VIL1-204ENST00000440053 CAMTA1Q9Y6Y1 1673 aa29.26■■■□□ 2.27
VIL1-204ENST00000440053 LARP1Q6PKG0 1096 aaKnown RBP29.26■■■□□ 2.27
VIL1-204ENST00000440053 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.26■■■□□ 2.27
VIL1-204ENST00000440053 SOX12O15370 315 aa29.24■■■□□ 2.27
VIL1-204ENST00000440053 FAM182BQ5T319 152 aa29.24■■■□□ 2.27
VIL1-204ENST00000440053 PIK3C2AO00443 1686 aa29.24■■■□□ 2.27
VIL1-204ENST00000440053 AKAP12Q02952 1782 aa29.23■■■□□ 2.27
VIL1-204ENST00000440053 CD163L1Q9NR16 1453 aa29.22■■■□□ 2.27
VIL1-204ENST00000440053 TTC21AQ8NDW8 1320 aa29.21■■■□□ 2.27
VIL1-204ENST00000440053 SLIT3O75094 1523 aa29.2■■■□□ 2.26
VIL1-204ENST00000440053 CCDC125Q86Z20 511 aa29.19■■■□□ 2.26
VIL1-204ENST00000440053 AXIN2Q9Y2T1 843 aa29.19■■■□□ 2.26
VIL1-204ENST00000440053 CLSPNQ9HAW4 1339 aa29.19■■■□□ 2.26
VIL1-204ENST00000440053 HDGFL2Q7Z4V5 671 aaPredicted RBP29.18■■■□□ 2.26
VIL1-204ENST00000440053 NME9Q86XW9 330 aa29.18■■■□□ 2.26
VIL1-204ENST00000440053 PUS7Q96PZ0 661 aaKnown RBP29.18■■■□□ 2.26
VIL1-204ENST00000440053 USP47Q96K76 1375 aa29.18■■■□□ 2.26
VIL1-204ENST00000440053 LMO7Q8WWI1 1683 aa29.17■■■□□ 2.26
VIL1-204ENST00000440053 TIMELESSQ9UNS1 1208 aa29.17■■■□□ 2.26
VIL1-204ENST00000440053 CCER1Q8TC90 406 aaPredicted RBP29.17■■■□□ 2.26
VIL1-204ENST00000440053 ARHGEF25Q86VW2 580 aa29.16■■■□□ 2.26
VIL1-204ENST00000440053 DEFB132Q7Z7B7 95 aa29.15■■■□□ 2.26
VIL1-204ENST00000440053 AATKQ6ZMQ8 1374 aa29.14■■■□□ 2.26
VIL1-204ENST00000440053 KCNH5Q8NCM2 988 aa29.14■■■□□ 2.26
VIL1-204ENST00000440053 TERF2IPQ9NYB0 399 aa29.14■■■□□ 2.26
VIL1-204ENST00000440053 A0A1W2PP64 1363 aa29.14■■■□□ 2.25
VIL1-204ENST00000440053 BLMP54132 1417 aaPredicted RBP29.13■■■□□ 2.25
VIL1-204ENST00000440053 COL5A2P05997 1499 aaPredicted RBP29.13■■■□□ 2.25
VIL1-204ENST00000440053 TCP11L2Q8N4U5 519 aa29.12■■■□□ 2.25
VIL1-204ENST00000440053 MON2Q7Z3U7 1717 aa29.12■■■□□ 2.25
VIL1-204ENST00000440053 BARGINQ6ZT62 677 aa29.11■■■□□ 2.25
VIL1-204ENST00000440053 THSD7AQ9UPZ6 1657 aa29.11■■■□□ 2.25
VIL1-204ENST00000440053 USP31Q70CQ4 1352 aa29.09■■■□□ 2.25
VIL1-204ENST00000440053 TMF1P82094 1093 aa29.09■■■□□ 2.25
VIL1-204ENST00000440053 SLC24A1O60721 1099 aa29.08■■■□□ 2.25
VIL1-204ENST00000440053 SF3B2Q13435 895 aaKnown RBP29.08■■■□□ 2.25
VIL1-204ENST00000440053 COL18A1P39060 1754 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms