RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 PARD3Q8TEW0 1356 aa16.64■□□□□ 0.26
IRF1-204ENST00000439555 A0A0G2JS52 829 aa16.64■□□□□ 0.25
IRF1-204ENST00000439555 WASLO00401 505 aaPredicted RBP16.64■□□□□ 0.25
IRF1-204ENST00000439555 MYT1Q01538 1121 aa16.64■□□□□ 0.25
IRF1-204ENST00000439555 BTG4Q9NY30 223 aa16.64■□□□□ 0.25
IRF1-204ENST00000439555 CAMKK2Q96RR4 588 aa16.63■□□□□ 0.25
IRF1-204ENST00000439555 SPATA31A5Q5VU36 1347 aa16.63■□□□□ 0.25
IRF1-204ENST00000439555 SPATA31A7Q8IWB4 1347 aa16.63■□□□□ 0.25
IRF1-204ENST00000439555 LMOD2Q6P5Q4 547 aa16.62■□□□□ 0.25
IRF1-204ENST00000439555 ADGRB2O60241 1585 aa16.62■□□□□ 0.25
IRF1-204ENST00000439555 YY1P25490 414 aa16.61■□□□□ 0.25
IRF1-204ENST00000439555 EZH2Q15910 746 aaKnown RBP16.61■□□□□ 0.25
IRF1-204ENST00000439555 FAM196AQ6ZSG2 479 aa16.61■□□□□ 0.25
IRF1-204ENST00000439555 HIRIP3Q9BW71 556 aaPredicted RBP16.61■□□□□ 0.25
IRF1-204ENST00000439555 MINK1Q8N4C8 1332 aaPredicted RBP16.61■□□□□ 0.25
IRF1-204ENST00000439555 CRYBG1Q9Y4K1 1723 aa16.61■□□□□ 0.25
IRF1-204ENST00000439555 RREB1Q92766 1687 aa16.6■□□□□ 0.25
IRF1-204ENST00000439555 PMFBP1Q8TBY8 1022 aa16.59■□□□□ 0.25
IRF1-204ENST00000439555 PRR36Q9H6K5 1346 aa16.58■□□□□ 0.24
IRF1-204ENST00000439555 GPRASP1Q5JY77 1395 aa16.58■□□□□ 0.24
IRF1-204ENST00000439555 TULP4Q9NRJ4 1543 aa16.57■□□□□ 0.24
IRF1-204ENST00000439555 FAM182BQ5T319 152 aa16.56■□□□□ 0.24
IRF1-204ENST00000439555 NUP188Q5SRE5 1749 aa16.56■□□□□ 0.24
IRF1-204ENST00000439555 NBPF1Q3BBV0 1214 aa16.55■□□□□ 0.24
IRF1-204ENST00000439555 NBPF8Q3BBV2 869 aa16.55■□□□□ 0.24
IRF1-204ENST00000439555 NBPF14Q5TI25 921 aa16.55■□□□□ 0.24
IRF1-204ENST00000439555 SPATA31A1Q5TZJ5 1347 aa16.54■□□□□ 0.24
IRF1-204ENST00000439555 DCAF8L1A6NGE4 600 aa16.54■□□□□ 0.24
IRF1-204ENST00000439555 PLEKHG5O94827 1062 aa16.54■□□□□ 0.24
IRF1-204ENST00000439555 TRIM37O94972 964 aa16.54■□□□□ 0.24
IRF1-204ENST00000439555 NGDNQ8NEJ9 315 aaKnown RBP16.54■□□□□ 0.24
IRF1-204ENST00000439555 L3MBTL2Q969R5 705 aa16.54■□□□□ 0.24
IRF1-204ENST00000439555 NUDT16Q96DE0 195 aaKnown RBP16.54■□□□□ 0.24
IRF1-204ENST00000439555 APBA3O96018 575 aa16.53■□□□□ 0.24
IRF1-204ENST00000439555 CDK19Q9BWU1 502 aa16.53■□□□□ 0.24
IRF1-204ENST00000439555 CCDC61Q9Y6R9 512 aa16.53■□□□□ 0.24
IRF1-204ENST00000439555 KIAA1210Q9ULL0 1709 aa16.51■□□□□ 0.23
IRF1-204ENST00000439555 BARGINQ6ZT62 677 aa16.51■□□□□ 0.23
IRF1-204ENST00000439555 SPON1Q9HCB6 807 aa16.51■□□□□ 0.23
IRF1-204ENST00000439555 PRDM11Q9NQV5 511 aa16.51■□□□□ 0.23
IRF1-204ENST00000439555 NINLQ9Y2I6 1382 aa16.51■□□□□ 0.23
IRF1-204ENST00000439555 ATP7BP35670 1465 aa16.5■□□□□ 0.23
IRF1-204ENST00000439555 PLEKHG3A1L390 1219 aa16.5■□□□□ 0.23
IRF1-204ENST00000439555 C11orf95C9JLR9 678 aaPredicted RBP16.5■□□□□ 0.23
IRF1-204ENST00000439555 ITSN1Q15811 1721 aa16.5■□□□□ 0.23
IRF1-204ENST00000439555 KCNQ2O43526 872 aa16.49■□□□□ 0.23
IRF1-204ENST00000439555 SIN3AQ96ST3 1273 aa16.49■□□□□ 0.23
IRF1-204ENST00000439555 POLR3AO14802 1390 aaPredicted RBP16.49■□□□□ 0.23
IRF1-204ENST00000439555 RGPD3A6NKT7 1758 aaPredicted RBP16.49■□□□□ 0.23
IRF1-204ENST00000439555 RGPD4Q7Z3J3 1758 aa16.49■□□□□ 0.23
IRF1-204ENST00000439555 CENPJQ9HC77 1338 aaPredicted RBP16.48■□□□□ 0.23
IRF1-204ENST00000439555 ARHGEF28Q8N1W1 1705 aaKnown RBP16.48■□□□□ 0.23
IRF1-204ENST00000439555 CHD4Q14839 1912 aa16.47■□□□□ 0.23
IRF1-204ENST00000439555 PDE3BQ13370 1112 aa16.47■□□□□ 0.23
IRF1-204ENST00000439555 PHRF1Q9P1Y6 1649 aaKnown RBP16.47■□□□□ 0.23
IRF1-204ENST00000439555 SBF2Q86WG5 1849 aa16.47■□□□□ 0.23
IRF1-204ENST00000439555 PAK3O75914 559 aaPredicted RBP16.46■□□□□ 0.23
IRF1-204ENST00000439555 PPP1R1BQ9UD71 204 aaPredicted RBP16.46■□□□□ 0.23
IRF1-204ENST00000439555 ACEP12821 1306 aa16.45■□□□□ 0.22
IRF1-204ENST00000439555 NEUROD1Q13562 356 aa16.45■□□□□ 0.22
IRF1-204ENST00000439555 KIAA0232Q92628 1395 aa16.45■□□□□ 0.22
IRF1-204ENST00000439555 PARP4Q9UKK3 1724 aaKnown RBP16.45■□□□□ 0.22
IRF1-204ENST00000439555 THRAP3Q9Y2W1 955 aaKnown RBP16.44■□□□□ 0.22
IRF1-204ENST00000439555 BRD4O60885 1362 aaPredicted RBP16.43■□□□□ 0.22
IRF1-204ENST00000439555 SRPK2P78362 688 aaKnown RBP16.43■□□□□ 0.22
IRF1-204ENST00000439555 PLSCR1O15162 318 aa16.42■□□□□ 0.22
IRF1-204ENST00000439555 EVA1CP58658 441 aa16.42■□□□□ 0.22
IRF1-204ENST00000439555 STRN4Q9NRL3 753 aa16.42■□□□□ 0.22
IRF1-204ENST00000439555 SSH2Q76I76 1423 aa16.41■□□□□ 0.22
IRF1-204ENST00000439555 CASZ1Q86V15 1759 aa16.41■□□□□ 0.22
IRF1-204ENST00000439555 CAMTA1Q9Y6Y1 1673 aa16.4■□□□□ 0.22
IRF1-204ENST00000439555 ROCK2O75116 1388 aaKnown RBP16.4■□□□□ 0.22
IRF1-204ENST00000439555 CHRNA2Q15822 529 aa16.4■□□□□ 0.22
IRF1-204ENST00000439555 TCP11L2Q8N4U5 519 aa16.4■□□□□ 0.22
IRF1-204ENST00000439555 CABP2Q9NPB3 220 aa16.4■□□□□ 0.22
IRF1-204ENST00000439555 EVC2Q86UK5 1308 aa16.4■□□□□ 0.22
IRF1-204ENST00000439555 LMO7Q8WWI1 1683 aa16.4■□□□□ 0.22
IRF1-204ENST00000439555 PEAK1Q9H792 1746 aa16.39■□□□□ 0.21
IRF1-204ENST00000439555 CPDO75976 1380 aa16.38■□□□□ 0.21
IRF1-204ENST00000439555 PPIP5K1Q6PFW1 1433 aa16.38■□□□□ 0.21
IRF1-204ENST00000439555 ZC3H6P61129 1189 aaKnown RBP16.38■□□□□ 0.21
IRF1-204ENST00000439555 TRIM26Q12899 539 aaPredicted RBP16.38■□□□□ 0.21
IRF1-204ENST00000439555 ABTB2Q8N961 1025 aa16.38■□□□□ 0.21
IRF1-204ENST00000439555 USP35Q9P2H5 1018 aa16.38■□□□□ 0.21
IRF1-204ENST00000439555 NLRP13Q86W25 1043 aa16.37■□□□□ 0.21
IRF1-204ENST00000439555 CABP1Q9NZU7 370 aa16.37■□□□□ 0.21
IRF1-204ENST00000439555 LARP1Q6PKG0 1096 aaKnown RBP16.36■□□□□ 0.21
IRF1-204ENST00000439555 USP19O94966 1318 aa16.36■□□□□ 0.21
IRF1-204ENST00000439555 TOPAZ1Q8N9V7 1692 aa16.35■□□□□ 0.21
IRF1-204ENST00000439555 ZNF784Q8NCA9 323 aaPredicted RBP16.35■□□□□ 0.21
IRF1-204ENST00000439555 ZNF692Q9BU19 519 aaPredicted RBP16.35■□□□□ 0.21
IRF1-204ENST00000439555 UTRNP46939 3433 aa16.35■□□□□ 0.21
IRF1-204ENST00000439555 NRKQ7Z2Y5 1582 aa16.34■□□□□ 0.21
IRF1-204ENST00000439555 NUTM2GQ5VZR2 741 aa16.34■□□□□ 0.21
IRF1-204ENST00000439555 SBNO2Q9Y2G9 1366 aa16.34■□□□□ 0.21
IRF1-204ENST00000439555 TRPM1Q7Z4N2 1603 aa16.34■□□□□ 0.21
IRF1-204ENST00000439555 GCP02774 474 aa16.33■□□□□ 0.2
IRF1-204ENST00000439555 OVOS2A0A0G2JMS6 1433 aa16.33■□□□□ 0.2
IRF1-204ENST00000439555 OVOS2A0A0J9YW53 1432 aa16.33■□□□□ 0.2
IRF1-204ENST00000439555 USP6P35125 1406 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms