RNA–Protein interactions for RNA: ENST00000439514.1

HLA-W-207, Transcript of major histocompatibility complex, class I, W (pseudogene), humanhuman

BASIC

Gene HLA-W, Length 771 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-W-207ENST00000439514 ALS2Q96Q42 1657 aa18.54■□□□□ 0.56
HLA-W-207ENST00000439514 CDK12Q9NYV4 1490 aaPredicted RBP18.53■□□□□ 0.56
HLA-W-207ENST00000439514 RXRBP28702 533 aa18.53■□□□□ 0.56
HLA-W-207ENST00000439514 USP21Q9UK80 565 aa18.53■□□□□ 0.56
HLA-W-207ENST00000439514 TRPC5Q9UL62 973 aaPredicted RBP18.53■□□□□ 0.56
HLA-W-207ENST00000439514 ZNF692Q9BU19 519 aaPredicted RBP18.52■□□□□ 0.56
HLA-W-207ENST00000439514 RBM6P78332 1123 aaKnown RBP18.51■□□□□ 0.55
HLA-W-207ENST00000439514 QTRT2Q9H974 415 aaKnown RBP18.5■□□□□ 0.55
HLA-W-207ENST00000439514 CABP1Q9NZU7 370 aa18.49■□□□□ 0.55
HLA-W-207ENST00000439514 ABCA3Q99758 1704 aa18.49■□□□□ 0.55
HLA-W-207ENST00000439514 USP6P35125 1406 aa18.48■□□□□ 0.55
HLA-W-207ENST00000439514 NINLQ9Y2I6 1382 aa18.47■□□□□ 0.55
HLA-W-207ENST00000439514 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.47■□□□□ 0.55
HLA-W-207ENST00000439514 SLIT2O94813 1529 aa18.47■□□□□ 0.55
HLA-W-207ENST00000439514 NLRP13Q86W25 1043 aa18.46■□□□□ 0.55
HLA-W-207ENST00000439514 UNC5CLQ8IV45 518 aa18.46■□□□□ 0.55
HLA-W-207ENST00000439514 ABTB2Q8N961 1025 aa18.46■□□□□ 0.55
HLA-W-207ENST00000439514 CABLES1Q8TDN4 633 aa18.46■□□□□ 0.55
HLA-W-207ENST00000439514 ATRNO75882 1429 aa18.46■□□□□ 0.55
HLA-W-207ENST00000439514 USP47Q96K76 1375 aa18.45■□□□□ 0.54
HLA-W-207ENST00000439514 CDCA8Q53HL2 280 aa18.45■□□□□ 0.54
HLA-W-207ENST00000439514 NWD2Q9ULI1 1742 aa18.45■□□□□ 0.54
HLA-W-207ENST00000439514 BCL9LQ86UU0 1499 aa18.45■□□□□ 0.54
HLA-W-207ENST00000439514 ST20-MTHFSA0A0A6YYL1 179 aa18.44■□□□□ 0.54
HLA-W-207ENST00000439514 TTC21AQ8NDW8 1320 aa18.44■□□□□ 0.54
HLA-W-207ENST00000439514 COL14A1Q05707 1796 aaKnown RBP18.42■□□□□ 0.54
HLA-W-207ENST00000439514 CPSF1Q10570 1443 aaKnown RBP18.42■□□□□ 0.54
HLA-W-207ENST00000439514 TMF1P82094 1093 aa18.42■□□□□ 0.54
HLA-W-207ENST00000439514 HDGFL2Q7Z4V5 671 aaPredicted RBP18.42■□□□□ 0.54
HLA-W-207ENST00000439514 TESK2Q96S53 571 aa18.42■□□□□ 0.54
HLA-W-207ENST00000439514 TERF2IPQ9NYB0 399 aa18.42■□□□□ 0.54
HLA-W-207ENST00000439514 CRYBG1Q9Y4K1 1723 aa18.41■□□□□ 0.54
HLA-W-207ENST00000439514 PRDM11Q9NQV5 511 aa18.41■□□□□ 0.54
HLA-W-207ENST00000439514 USP19O94966 1318 aa18.41■□□□□ 0.54
HLA-W-207ENST00000439514 SSH2Q76I76 1423 aa18.4■□□□□ 0.54
HLA-W-207ENST00000439514 AKAP12Q02952 1782 aa18.4■□□□□ 0.54
HLA-W-207ENST00000439514 PLEKHG5O94827 1062 aa18.4■□□□□ 0.54
HLA-W-207ENST00000439514 GJD4Q96KN9 370 aaPredicted RBP18.4■□□□□ 0.54
HLA-W-207ENST00000439514 PLCH1Q4KWH8 1693 aa18.4■□□□□ 0.54
HLA-W-207ENST00000439514 KTN1Q86UP2 1357 aaKnown RBP18.4■□□□□ 0.54
HLA-W-207ENST00000439514 PHRF1Q9P1Y6 1649 aaKnown RBP18.39■□□□□ 0.53
HLA-W-207ENST00000439514 FAM83GA6ND36 823 aa18.39■□□□□ 0.53
HLA-W-207ENST00000439514 VPS72Q15906 364 aa18.39■□□□□ 0.53
HLA-W-207ENST00000439514 TMC1Q8TDI8 760 aa18.39■□□□□ 0.53
HLA-W-207ENST00000439514 CPDO75976 1380 aa18.39■□□□□ 0.53
HLA-W-207ENST00000439514 NLRP6P59044 892 aa18.38■□□□□ 0.53
HLA-W-207ENST00000439514 TTC21BQ7Z4L5 1316 aa18.38■□□□□ 0.53
HLA-W-207ENST00000439514 RGS12O14924 1447 aa18.36■□□□□ 0.53
HLA-W-207ENST00000439514 NUTM2GQ5VZR2 741 aa18.36■□□□□ 0.53
HLA-W-207ENST00000439514 MON2Q7Z3U7 1717 aa18.36■□□□□ 0.53
HLA-W-207ENST00000439514 KCNH5Q8NCM2 988 aa18.36■□□□□ 0.53
HLA-W-207ENST00000439514 KIAA0232Q92628 1395 aa18.36■□□□□ 0.53
HLA-W-207ENST00000439514 BTG4Q9NY30 223 aa18.36■□□□□ 0.53
HLA-W-207ENST00000439514 NRKQ7Z2Y5 1582 aa18.35■□□□□ 0.53
HLA-W-207ENST00000439514 EDC4Q6P2E9 1401 aaKnown RBP18.35■□□□□ 0.53
HLA-W-207ENST00000439514 GCP02774 474 aa18.35■□□□□ 0.53
HLA-W-207ENST00000439514 SLIT3O75094 1523 aa18.34■□□□□ 0.53
HLA-W-207ENST00000439514 CCDC9Q9Y3X0 531 aaKnown RBP18.34■□□□□ 0.53
HLA-W-207ENST00000439514 NRAPQ86VF7 1730 aa18.32■□□□□ 0.52
HLA-W-207ENST00000439514 PIK3C2AO00443 1686 aa18.32■□□□□ 0.52
HLA-W-207ENST00000439514 ZC3H6P61129 1189 aaKnown RBP18.32■□□□□ 0.52
HLA-W-207ENST00000439514 EIF4G2P78344 907 aaKnown RBP eCLIP18.32■□□□□ 0.52
HLA-W-207ENST00000439514 SLC12A5Q9H2X9 1139 aa18.32■□□□□ 0.52
HLA-W-207ENST00000439514 CD163L1Q9NR16 1453 aa18.32■□□□□ 0.52
HLA-W-207ENST00000439514 USP31Q70CQ4 1352 aa18.31■□□□□ 0.52
HLA-W-207ENST00000439514 A0A1W2PP64 1363 aa18.3■□□□□ 0.52
HLA-W-207ENST00000439514 ANKRD36BQ8N2N9 1353 aa18.3■□□□□ 0.52
HLA-W-207ENST00000439514 GLI3P10071 1580 aa18.3■□□□□ 0.52
HLA-W-207ENST00000439514 EVA1CP58658 441 aa18.29■□□□□ 0.52
HLA-W-207ENST00000439514 AATKQ6ZMQ8 1374 aa18.29■□□□□ 0.52
HLA-W-207ENST00000439514 USP54Q70EL1 1684 aa18.28■□□□□ 0.52
HLA-W-207ENST00000439514 ONECUT3O60422 494 aaPredicted RBP18.28■□□□□ 0.52
HLA-W-207ENST00000439514 ABCC6O95255 1503 aa18.28■□□□□ 0.52
HLA-W-207ENST00000439514 SPATA31A5Q5VU36 1347 aa18.27■□□□□ 0.52
HLA-W-207ENST00000439514 SPATA31A7Q8IWB4 1347 aa18.27■□□□□ 0.52
HLA-W-207ENST00000439514 CHRNA2Q15822 529 aa18.27■□□□□ 0.52
HLA-W-207ENST00000439514 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.27■□□□□ 0.52
HLA-W-207ENST00000439514 LMO7Q8WWI1 1683 aa18.26■□□□□ 0.51
HLA-W-207ENST00000439514 CCDC125Q86Z20 511 aa18.24■□□□□ 0.51
HLA-W-207ENST00000439514 SEPT12Q8IYM1 358 aa18.24■□□□□ 0.51
HLA-W-207ENST00000439514 STRN4Q9NRL3 753 aa18.24■□□□□ 0.51
HLA-W-207ENST00000439514 THRAP3Q9Y2W1 955 aaKnown RBP18.24■□□□□ 0.51
HLA-W-207ENST00000439514 SPATA31A1Q5TZJ5 1347 aa18.23■□□□□ 0.51
HLA-W-207ENST00000439514 CAMTA1Q9Y6Y1 1673 aa18.23■□□□□ 0.51
HLA-W-207ENST00000439514 ARHGEF25Q86VW2 580 aa18.23■□□□□ 0.51
HLA-W-207ENST00000439514 UPF1Q92900 1129 aaKnown RBP eCLIP18.23■□□□□ 0.51
HLA-W-207ENST00000439514 COL5A2P05997 1499 aaPredicted RBP18.22■□□□□ 0.51
HLA-W-207ENST00000439514 A0A0G2JS52 829 aa18.22■□□□□ 0.51
HLA-W-207ENST00000439514 MYT1Q01538 1121 aa18.22■□□□□ 0.51
HLA-W-207ENST00000439514 NME9Q86XW9 330 aa18.22■□□□□ 0.51
HLA-W-207ENST00000439514 NFAT5O94916 1531 aa18.22■□□□□ 0.51
HLA-W-207ENST00000439514 BARGINQ6ZT62 677 aa18.21■□□□□ 0.51
HLA-W-207ENST00000439514 COG3Q96JB2 828 aa18.21■□□□□ 0.51
HLA-W-207ENST00000439514 OVOS2A0A0J9YW53 1432 aa18.21■□□□□ 0.51
HLA-W-207ENST00000439514 OVOS2Q6IE36 1432 aa18.21■□□□□ 0.51
HLA-W-207ENST00000439514 ZBTB7CA1YPR0 619 aa18.2■□□□□ 0.5
HLA-W-207ENST00000439514 HSPA5P11021 654 aaKnown RBP18.2■□□□□ 0.5
HLA-W-207ENST00000439514 FAM98CQ17RN3 349 aaKnown RBP18.2■□□□□ 0.5
HLA-W-207ENST00000439514 KRT27Q7Z3Y8 459 aa18.2■□□□□ 0.5
HLA-W-207ENST00000439514 TCP11L2Q8N4U5 519 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms