RNA–Protein interactions for RNA: ENST00000438763.6

HLA-DOB-206, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DOB, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-206ENST00000438763 CDK12Q9NYV4 1490 aaPredicted RBP16.75■□□□□ 0.27
HLA-DOB-206ENST00000438763 NSD2O96028 1365 aa16.75■□□□□ 0.27
HLA-DOB-206ENST00000438763 CDC42BPGQ6DT37 1551 aa16.75■□□□□ 0.27
HLA-DOB-206ENST00000438763 NUTM2FA1L443 756 aa16.75■□□□□ 0.27
HLA-DOB-206ENST00000438763 NLRP13Q86W25 1043 aa16.75■□□□□ 0.27
HLA-DOB-206ENST00000438763 SHPRHQ149N8 1683 aa16.74■□□□□ 0.27
HLA-DOB-206ENST00000438763 BRD4O60885 1362 aaPredicted RBP16.74■□□□□ 0.27
HLA-DOB-206ENST00000438763 AFF2P51816 1311 aa16.74■□□□□ 0.27
HLA-DOB-206ENST00000438763 C14orf37Q86TY3 774 aa16.74■□□□□ 0.27
HLA-DOB-206ENST00000438763 NALCNQ8IZF0 1738 aa16.73■□□□□ 0.27
HLA-DOB-206ENST00000438763 C19orf44Q9H6X5 657 aa16.73■□□□□ 0.27
HLA-DOB-206ENST00000438763 RGS12O14924 1447 aa16.73■□□□□ 0.27
HLA-DOB-206ENST00000438763 FMN2Q9NZ56 1722 aa16.72■□□□□ 0.27
HLA-DOB-206ENST00000438763 TOPAZ1Q8N9V7 1692 aa16.71■□□□□ 0.27
HLA-DOB-206ENST00000438763 ACEP12821 1306 aa16.71■□□□□ 0.27
HLA-DOB-206ENST00000438763 AHDC1Q5TGY3 1603 aaPredicted RBP16.71■□□□□ 0.27
HLA-DOB-206ENST00000438763 FYB1O15117 783 aa16.71■□□□□ 0.27
HLA-DOB-206ENST00000438763 PPP2R1AP30153 589 aa16.71■□□□□ 0.27
HLA-DOB-206ENST00000438763 EDC4Q6P2E9 1401 aaKnown RBP16.71■□□□□ 0.27
HLA-DOB-206ENST00000438763 MORC1Q86VD1 984 aa16.71■□□□□ 0.27
HLA-DOB-206ENST00000438763 POLR3AO14802 1390 aaPredicted RBP16.69■□□□□ 0.26
HLA-DOB-206ENST00000438763 ITSN1Q15811 1721 aa16.69■□□□□ 0.26
HLA-DOB-206ENST00000438763 YTHDC1Q96MU7 727 aaKnown RBP16.68■□□□□ 0.26
HLA-DOB-206ENST00000438763 NGDNQ8NEJ9 315 aaKnown RBP16.67■□□□□ 0.26
HLA-DOB-206ENST00000438763 PMFBP1Q8TBY8 1022 aa16.67■□□□□ 0.26
HLA-DOB-206ENST00000438763 AKAP12Q02952 1782 aa16.67■□□□□ 0.26
HLA-DOB-206ENST00000438763 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.66■□□□□ 0.26
HLA-DOB-206ENST00000438763 PNISRQ8TF01 805 aaKnown RBP16.66■□□□□ 0.26
HLA-DOB-206ENST00000438763 GGNBP2Q9H3C7 697 aa16.66■□□□□ 0.26
HLA-DOB-206ENST00000438763 QTRT2Q9H974 415 aaKnown RBP16.66■□□□□ 0.26
HLA-DOB-206ENST00000438763 PHF8Q9UPP1 1060 aa16.66■□□□□ 0.26
HLA-DOB-206ENST00000438763 MON2Q7Z3U7 1717 aa16.66■□□□□ 0.26
HLA-DOB-206ENST00000438763 DCCP43146 1447 aa16.66■□□□□ 0.26
HLA-DOB-206ENST00000438763 ATF3P18847 181 aa16.65■□□□□ 0.26
HLA-DOB-206ENST00000438763 C8orf37Q96NL8 207 aa16.65■□□□□ 0.26
HLA-DOB-206ENST00000438763 USP6P35125 1406 aa16.65■□□□□ 0.26
HLA-DOB-206ENST00000438763 TTC21BQ7Z4L5 1316 aa16.65■□□□□ 0.26
HLA-DOB-206ENST00000438763 RGPD8O14715 1765 aaPredicted RBP16.65■□□□□ 0.26
HLA-DOB-206ENST00000438763 RBM6P78332 1123 aaKnown RBP16.64■□□□□ 0.26
HLA-DOB-206ENST00000438763 BRINP3Q76B58 766 aa16.64■□□□□ 0.26
HLA-DOB-206ENST00000438763 CADPS2Q86UW7 1296 aa16.64■□□□□ 0.26
HLA-DOB-206ENST00000438763 SSH2Q76I76 1423 aa16.64■□□□□ 0.25
HLA-DOB-206ENST00000438763 FAM9BQ8IZU0 186 aa16.64■□□□□ 0.25
HLA-DOB-206ENST00000438763 TTC21AQ8NDW8 1320 aa16.63■□□□□ 0.25
HLA-DOB-206ENST00000438763 ESCO1Q5FWF5 840 aa16.63■□□□□ 0.25
HLA-DOB-206ENST00000438763 ZRANB1Q9UGI0 708 aa16.63■□□□□ 0.25
HLA-DOB-206ENST00000438763 NME9Q86XW9 330 aa16.62■□□□□ 0.25
HLA-DOB-206ENST00000438763 C1orf167Q5SNV9 1468 aa16.61■□□□□ 0.25
HLA-DOB-206ENST00000438763 ANKRD26Q9UPS8 1709 aa16.61■□□□□ 0.25
HLA-DOB-206ENST00000438763 KIF20BQ96Q89 1820 aa16.6■□□□□ 0.25
HLA-DOB-206ENST00000438763 TNNT2P45379 298 aaPredicted RBP16.6■□□□□ 0.25
HLA-DOB-206ENST00000438763 COG3Q96JB2 828 aa16.6■□□□□ 0.25
HLA-DOB-206ENST00000438763 MST1RQ04912 1400 aa16.59■□□□□ 0.25
HLA-DOB-206ENST00000438763 NRKQ7Z2Y5 1582 aa16.59■□□□□ 0.25
HLA-DOB-206ENST00000438763 ORAI2Q96SN7 254 aa16.59■□□□□ 0.25
HLA-DOB-206ENST00000438763 CENPBP07199 599 aaPredicted RBP16.58■□□□□ 0.24
HLA-DOB-206ENST00000438763 MTHFSP49914 203 aa16.58■□□□□ 0.24
HLA-DOB-206ENST00000438763 DDX17Q92841 729 aaKnown RBP16.58■□□□□ 0.24
HLA-DOB-206ENST00000438763 PSME1Q06323 249 aa16.57■□□□□ 0.24
HLA-DOB-206ENST00000438763 USP31Q70CQ4 1352 aa16.57■□□□□ 0.24
HLA-DOB-206ENST00000438763 ADAMTS2O95450 1211 aa16.56■□□□□ 0.24
HLA-DOB-206ENST00000438763 CFAP53Q96M91 514 aa16.56■□□□□ 0.24
HLA-DOB-206ENST00000438763 INSRP06213 1382 aa16.56■□□□□ 0.24
HLA-DOB-206ENST00000438763 AATKQ6ZMQ8 1374 aa16.55■□□□□ 0.24
HLA-DOB-206ENST00000438763 EP400Q96L91 3159 aa16.55■□□□□ 0.24
HLA-DOB-206ENST00000438763 OVOS2A0A0J9YW53 1432 aa16.54■□□□□ 0.24
HLA-DOB-206ENST00000438763 OVOS2Q6IE36 1432 aa16.54■□□□□ 0.24
HLA-DOB-206ENST00000438763 PNPLA6Q8IY17 1366 aa16.54■□□□□ 0.24
HLA-DOB-206ENST00000438763 NGLY1Q96IV0 654 aa16.54■□□□□ 0.24
HLA-DOB-206ENST00000438763 FOXO3O43524 673 aa16.53■□□□□ 0.24
HLA-DOB-206ENST00000438763 HNRNPUQ00839 825 aaKnown RBP eCLIP16.53■□□□□ 0.24
HLA-DOB-206ENST00000438763 WDR43Q15061 677 aaKnown RBP eCLIP16.53■□□□□ 0.24
HLA-DOB-206ENST00000438763 KIF1AQ12756 1690 aa16.53■□□□□ 0.24
HLA-DOB-206ENST00000438763 LRRC59Q96AG4 307 aaKnown RBP16.52■□□□□ 0.24
HLA-DOB-206ENST00000438763 POLKQ9UBT6 870 aa16.52■□□□□ 0.24
HLA-DOB-206ENST00000438763 NHSL1Q5SYE7 1610 aa16.52■□□□□ 0.24
HLA-DOB-206ENST00000438763 PAK3O75914 559 aaPredicted RBP16.51■□□□□ 0.23
HLA-DOB-206ENST00000438763 NLRP6P59044 892 aa16.51■□□□□ 0.23
HLA-DOB-206ENST00000438763 KRT28Q7Z3Y7 464 aa16.51■□□□□ 0.23
HLA-DOB-206ENST00000438763 ABTB2Q8N961 1025 aa16.51■□□□□ 0.23
HLA-DOB-206ENST00000438763 ADAMTS8Q9UP79 889 aa16.51■□□□□ 0.23
HLA-DOB-206ENST00000438763 USP21Q9UK80 565 aa16.5■□□□□ 0.23
HLA-DOB-206ENST00000438763 NPHP3Q7Z494 1330 aa16.49■□□□□ 0.23
HLA-DOB-206ENST00000438763 FBLN1P23142 703 aa16.49■□□□□ 0.23
HLA-DOB-206ENST00000438763 SMG6Q86US8 1419 aaKnown RBP16.49■□□□□ 0.23
HLA-DOB-206ENST00000438763 PIK3C2AO00443 1686 aa16.48■□□□□ 0.23
HLA-DOB-206ENST00000438763 TRPC5Q9UL62 973 aaPredicted RBP16.47■□□□□ 0.23
HLA-DOB-206ENST00000438763 NUDCQ9Y266 331 aa16.47■□□□□ 0.23
HLA-DOB-206ENST00000438763 EMILIN1Q9Y6C2 1016 aa16.47■□□□□ 0.23
HLA-DOB-206ENST00000438763 BLMP54132 1417 aaPredicted RBP16.46■□□□□ 0.23
HLA-DOB-206ENST00000438763 USP54Q70EL1 1684 aa16.46■□□□□ 0.23
HLA-DOB-206ENST00000438763 DIAPH1O60610 1272 aaKnown RBP16.46■□□□□ 0.23
HLA-DOB-206ENST00000438763 SBNO1A3KN83 1393 aa16.46■□□□□ 0.23
HLA-DOB-206ENST00000438763 COL3A1P02461 1466 aaPredicted RBP16.46■□□□□ 0.22
HLA-DOB-206ENST00000438763 ZBED9Q6R2W3 1325 aa16.45■□□□□ 0.22
HLA-DOB-206ENST00000438763 PPM1GO15355 546 aaPredicted RBP16.45■□□□□ 0.22
HLA-DOB-206ENST00000438763 XPCQ01831 940 aaPredicted RBP16.45■□□□□ 0.22
HLA-DOB-206ENST00000438763 RRS1Q15050 365 aaKnown RBP16.45■□□□□ 0.22
HLA-DOB-206ENST00000438763 MAP2P11137 1827 aaKnown RBP16.45■□□□□ 0.22
HLA-DOB-206ENST00000438763 NUTM2GQ5VZR2 741 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms