RNA–Protein interactions for RNA: ENST00000438748.5

POLR1B-208, Transcript of RNA polymerase I subunit B, humanhuman

TSL 4

Gene POLR1B, Length 555 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-208ENST00000438748 CPSF1Q10570 1443 aaKnown RBP17.2■□□□□ 0.34
POLR1B-208ENST00000438748 SPATA31A3Q5VYP0 1347 aa17.2■□□□□ 0.34
POLR1B-208ENST00000438748 SHPRHQ149N8 1683 aa17.2■□□□□ 0.34
POLR1B-208ENST00000438748 CD163L1Q9NR16 1453 aa17.19■□□□□ 0.34
POLR1B-208ENST00000438748 ARHGEF10O15013 1369 aa17.19■□□□□ 0.34
POLR1B-208ENST00000438748 BRD4O60885 1362 aaPredicted RBP17.19■□□□□ 0.34
POLR1B-208ENST00000438748 PLEKHG5O94827 1062 aa17.19■□□□□ 0.34
POLR1B-208ENST00000438748 PNPLA6Q8IY17 1366 aa17.18■□□□□ 0.34
POLR1B-208ENST00000438748 NRKQ7Z2Y5 1582 aa17.18■□□□□ 0.34
POLR1B-208ENST00000438748 HAP1P54257 671 aaPredicted RBP17.17■□□□□ 0.34
POLR1B-208ENST00000438748 EDC4Q6P2E9 1401 aaKnown RBP17.17■□□□□ 0.34
POLR1B-208ENST00000438748 WASHC2AQ641Q2 1341 aa17.17■□□□□ 0.34
POLR1B-208ENST00000438748 ALS2Q96Q42 1657 aa17.16■□□□□ 0.34
POLR1B-208ENST00000438748 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.16■□□□□ 0.34
POLR1B-208ENST00000438748 ABTB2Q8N961 1025 aa17.16■□□□□ 0.34
POLR1B-208ENST00000438748 TTC21BQ7Z4L5 1316 aa17.16■□□□□ 0.34
POLR1B-208ENST00000438748 TTC21AQ8NDW8 1320 aa17.16■□□□□ 0.34
POLR1B-208ENST00000438748 NUTM2GQ5VZR2 741 aa17.15■□□□□ 0.34
POLR1B-208ENST00000438748 COL22A1Q8NFW1 1626 aaPredicted RBP17.14■□□□□ 0.33
POLR1B-208ENST00000438748 NSD3Q9BZ95 1437 aa17.14■□□□□ 0.33
POLR1B-208ENST00000438748 NUTM2BA6NNL0 878 aaPredicted RBP17.14■□□□□ 0.33
POLR1B-208ENST00000438748 NUTM2EB1AL46 878 aaPredicted RBP17.14■□□□□ 0.33
POLR1B-208ENST00000438748 NUTM2AQ8IVF1 878 aaPredicted RBP17.14■□□□□ 0.33
POLR1B-208ENST00000438748 SPATA31A6Q5VVP1 1343 aa17.14■□□□□ 0.33
POLR1B-208ENST00000438748 SSH2Q76I76 1423 aa17.13■□□□□ 0.33
POLR1B-208ENST00000438748 PANK3Q9H999 370 aa17.12■□□□□ 0.33
POLR1B-208ENST00000438748 PIK3C2AO00443 1686 aa17.12■□□□□ 0.33
POLR1B-208ENST00000438748 MED1Q15648 1581 aaPredicted RBP17.11■□□□□ 0.33
POLR1B-208ENST00000438748 NLRP6P59044 892 aa17.11■□□□□ 0.33
POLR1B-208ENST00000438748 MEX3CQ5U5Q3 659 aaKnown RBP17.11■□□□□ 0.33
POLR1B-208ENST00000438748 NLRP13Q86W25 1043 aa17.11■□□□□ 0.33
POLR1B-208ENST00000438748 KIF20BQ96Q89 1820 aa17.1■□□□□ 0.33
POLR1B-208ENST00000438748 NME9Q86XW9 330 aa17.1■□□□□ 0.33
POLR1B-208ENST00000438748 ABCA3Q99758 1704 aa17.1■□□□□ 0.33
POLR1B-208ENST00000438748 CABLES1Q8TDN4 633 aa17.09■□□□□ 0.33
POLR1B-208ENST00000438748 PHRF1Q9P1Y6 1649 aaKnown RBP17.09■□□□□ 0.33
POLR1B-208ENST00000438748 CGNL1Q0VF96 1302 aa17.08■□□□□ 0.32
POLR1B-208ENST00000438748 ZNF316A6NFI3 1004 aaPredicted RBP17.07■□□□□ 0.32
POLR1B-208ENST00000438748 ADAMTS2O95450 1211 aa17.07■□□□□ 0.32
POLR1B-208ENST00000438748 CARD14Q9BXL6 1004 aa17.07■□□□□ 0.32
POLR1B-208ENST00000438748 KNSTRNQ9Y448 316 aa17.07■□□□□ 0.32
POLR1B-208ENST00000438748 LRP6O75581 1613 aa17.07■□□□□ 0.32
POLR1B-208ENST00000438748 SOX12O15370 315 aa17.06■□□□□ 0.32
POLR1B-208ENST00000438748 COG3Q96JB2 828 aa17.06■□□□□ 0.32
POLR1B-208ENST00000438748 CRYBG1Q9Y4K1 1723 aa17.06■□□□□ 0.32
POLR1B-208ENST00000438748 GGNBP2Q9H3C7 697 aa17.05■□□□□ 0.32
POLR1B-208ENST00000438748 ZRANB1Q9UGI0 708 aa17.05■□□□□ 0.32
POLR1B-208ENST00000438748 USP31Q70CQ4 1352 aa17.04■□□□□ 0.32
POLR1B-208ENST00000438748 USP19O94966 1318 aa17.04■□□□□ 0.32
POLR1B-208ENST00000438748 ZBTB7CA1YPR0 619 aa17.04■□□□□ 0.32
POLR1B-208ENST00000438748 OVOS2A0A0J9YW53 1432 aa17.04■□□□□ 0.32
POLR1B-208ENST00000438748 OVOS2Q6IE36 1432 aa17.04■□□□□ 0.32
POLR1B-208ENST00000438748 USP54Q70EL1 1684 aa17.04■□□□□ 0.32
POLR1B-208ENST00000438748 SLIT3O75094 1523 aa17.03■□□□□ 0.32
POLR1B-208ENST00000438748 MARF1Q9Y4F3 1742 aaKnown RBP17.02■□□□□ 0.32
POLR1B-208ENST00000438748 KCNH5Q8NCM2 988 aa17.02■□□□□ 0.32
POLR1B-208ENST00000438748 C8orf37Q96NL8 207 aa17.02■□□□□ 0.32
POLR1B-208ENST00000438748 PHF23Q9BUL5 403 aaPredicted RBP17.02■□□□□ 0.32
POLR1B-208ENST00000438748 NSD2O96028 1365 aa17.02■□□□□ 0.31
POLR1B-208ENST00000438748 FYB1O15117 783 aa17.01■□□□□ 0.31
POLR1B-208ENST00000438748 DDX10Q13206 875 aaKnown RBP17.01■□□□□ 0.31
POLR1B-208ENST00000438748 PRDM11Q9NQV5 511 aa17.01■□□□□ 0.31
POLR1B-208ENST00000438748 ANKRD26Q9UPS8 1709 aa17.01■□□□□ 0.31
POLR1B-208ENST00000438748 GCP02774 474 aa17■□□□□ 0.31
POLR1B-208ENST00000438748 ZC3H6P61129 1189 aaKnown RBP17■□□□□ 0.31
POLR1B-208ENST00000438748 CNGB1Q14028 1251 aaPredicted RBP17■□□□□ 0.31
POLR1B-208ENST00000438748 NGLY1Q96IV0 654 aa16.99■□□□□ 0.31
POLR1B-208ENST00000438748 KIAA0232Q92628 1395 aa16.99■□□□□ 0.31
POLR1B-208ENST00000438748 COL14A1Q05707 1796 aaKnown RBP16.97■□□□□ 0.31
POLR1B-208ENST00000438748 NFAT5O94916 1531 aa16.97■□□□□ 0.31
POLR1B-208ENST00000438748 CC2D1BQ5T0F9 858 aaKnown RBP16.97■□□□□ 0.31
POLR1B-208ENST00000438748 CHRNA2Q15822 529 aa16.96■□□□□ 0.31
POLR1B-208ENST00000438748 MORC1Q86VD1 984 aa16.96■□□□□ 0.31
POLR1B-208ENST00000438748 PLCH1Q4KWH8 1693 aa16.96■□□□□ 0.31
POLR1B-208ENST00000438748 AFF2P51816 1311 aa16.96■□□□□ 0.3
POLR1B-208ENST00000438748 CPDO75976 1380 aa16.95■□□□□ 0.3
POLR1B-208ENST00000438748 TNNT2P45379 298 aaPredicted RBP16.95■□□□□ 0.3
POLR1B-208ENST00000438748 LTN1O94822 1766 aa16.94■□□□□ 0.3
POLR1B-208ENST00000438748 PER1O15534 1290 aaPredicted RBP16.94■□□□□ 0.3
POLR1B-208ENST00000438748 AMER1Q5JTC6 1135 aaPredicted RBP16.94■□□□□ 0.3
POLR1B-208ENST00000438748 FAM83GA6ND36 823 aa16.92■□□□□ 0.3
POLR1B-208ENST00000438748 USP21Q9UK80 565 aa16.92■□□□□ 0.3
POLR1B-208ENST00000438748 NPC1L1Q9UHC9 1359 aa16.91■□□□□ 0.3
POLR1B-208ENST00000438748 NWD2Q9ULI1 1742 aa16.91■□□□□ 0.3
POLR1B-208ENST00000438748 AMPHP49418 695 aa16.91■□□□□ 0.3
POLR1B-208ENST00000438748 RRS1Q15050 365 aaKnown RBP16.91■□□□□ 0.3
POLR1B-208ENST00000438748 ARHGEF25Q86VW2 580 aa16.91■□□□□ 0.3
POLR1B-208ENST00000438748 BTG4Q9NY30 223 aa16.91■□□□□ 0.3
POLR1B-208ENST00000438748 AATKQ6ZMQ8 1374 aa16.9■□□□□ 0.3
POLR1B-208ENST00000438748 ZNF772Q68DY9 489 aaPredicted RBP16.9■□□□□ 0.3
POLR1B-208ENST00000438748 MAP3K19Q56UN5 1328 aa16.9■□□□□ 0.3
POLR1B-208ENST00000438748 SLIT2O94813 1529 aa16.9■□□□□ 0.3
POLR1B-208ENST00000438748 ABCC6O95255 1503 aa16.9■□□□□ 0.3
POLR1B-208ENST00000438748 LMO7Q8WWI1 1683 aa16.89■□□□□ 0.29
POLR1B-208ENST00000438748 PPM1GO15355 546 aaPredicted RBP16.89■□□□□ 0.29
POLR1B-208ENST00000438748 FBLN1P23142 703 aa16.89■□□□□ 0.29
POLR1B-208ENST00000438748 EVA1CP58658 441 aa16.89■□□□□ 0.29
POLR1B-208ENST00000438748 STRN4Q9NRL3 753 aa16.89■□□□□ 0.29
POLR1B-208ENST00000438748 CCDC9Q9Y3X0 531 aaKnown RBP16.89■□□□□ 0.29
POLR1B-208ENST00000438748 RTL1A6NKG5 1358 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms