RNA–Protein interactions for RNA: ENST00000438704.6

HMGB2-202, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-202ENST00000438704 RNF17Q9BXT8 1623 aaKnown RBP10.98□□□□□ -0.65
HMGB2-202ENST00000438704 NEUROD1Q13562 356 aa10.97□□□□□ -0.65
HMGB2-202ENST00000438704 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.97□□□□□ -0.65
HMGB2-202ENST00000438704 A2MP01023 1474 aa10.97□□□□□ -0.65
HMGB2-202ENST00000438704 LMTK2Q8IWU2 1503 aa10.97□□□□□ -0.65
HMGB2-202ENST00000438704 MROH1Q8NDA8 1641 aa10.96□□□□□ -0.65
HMGB2-202ENST00000438704 FRMPD1Q5SYB0 1578 aa10.96□□□□□ -0.65
HMGB2-202ENST00000438704 NYAP1Q6ZVC0 841 aa10.96□□□□□ -0.65
HMGB2-202ENST00000438704 TRIM6-TRIM34B2RNG4 842 aa10.95□□□□□ -0.66
HMGB2-202ENST00000438704 KIAA1468Q9P260 1216 aa10.95□□□□□ -0.66
HMGB2-202ENST00000438704 KIF13AQ9H1H9 1805 aa10.95□□□□□ -0.66
HMGB2-202ENST00000438704 REREQ9P2R6 1566 aa10.94□□□□□ -0.66
HMGB2-202ENST00000438704 PLA2R1Q13018 1463 aa10.94□□□□□ -0.66
HMGB2-202ENST00000438704 PTPRTO14522 1441 aa10.94□□□□□ -0.66
HMGB2-202ENST00000438704 A0A0G2JS52 829 aa10.94□□□□□ -0.66
HMGB2-202ENST00000438704 SOWAHBA6NEL2 793 aa10.94□□□□□ -0.66
HMGB2-202ENST00000438704 SPDYE16A6NNV3 312 aaPredicted RBP10.94□□□□□ -0.66
HMGB2-202ENST00000438704 DDX12PQ92771 950 aa10.94□□□□□ -0.66
HMGB2-202ENST00000438704 TET3O43151 1660 aa10.94□□□□□ -0.66
HMGB2-202ENST00000438704 ABCA6Q8N139 1617 aa10.94□□□□□ -0.66
HMGB2-202ENST00000438704 DIP2CQ9Y2E4 1556 aa10.94□□□□□ -0.66
HMGB2-202ENST00000438704 KANK1Q14678 1352 aa10.93□□□□□ -0.66
HMGB2-202ENST00000438704 EN1Q05925 392 aaPredicted RBP10.93□□□□□ -0.66
HMGB2-202ENST00000438704 ZFRQ96KR1 1074 aaKnown RBP10.93□□□□□ -0.66
HMGB2-202ENST00000438704 NEURL4Q96JN8 1562 aa10.92□□□□□ -0.66
HMGB2-202ENST00000438704 ITGBL1O95965 494 aaPredicted RBP10.92□□□□□ -0.66
HMGB2-202ENST00000438704 ARIH1Q9Y4X5 557 aaPredicted RBP10.92□□□□□ -0.66
HMGB2-202ENST00000438704 UHRF1BP1Q6BDS2 1440 aa10.92□□□□□ -0.66
HMGB2-202ENST00000438704 NBR1Q14596 966 aa10.91□□□□□ -0.66
HMGB2-202ENST00000438704 FAM98CQ17RN3 349 aaKnown RBP10.91□□□□□ -0.66
HMGB2-202ENST00000438704 L3MBTL2Q969R5 705 aa10.91□□□□□ -0.66
HMGB2-202ENST00000438704 RBM33Q96EV2 1170 aaKnown RBP10.91□□□□□ -0.66
HMGB2-202ENST00000438704 TRPM2O94759 1503 aa10.9□□□□□ -0.66
HMGB2-202ENST00000438704 AGLP35573 1532 aa10.9□□□□□ -0.66
HMGB2-202ENST00000438704 RAPGEF3O95398 923 aa10.9□□□□□ -0.66
HMGB2-202ENST00000438704 BCAMP50895 628 aa10.9□□□□□ -0.66
HMGB2-202ENST00000438704 CCDC144AA2RUR9 1427 aa10.9□□□□□ -0.66
HMGB2-202ENST00000438704 KIF3BO15066 747 aa10.89□□□□□ -0.67
HMGB2-202ENST00000438704 E2F4Q16254 413 aa10.89□□□□□ -0.67
HMGB2-202ENST00000438704 EFCAB6Q5THR3 1501 aa10.89□□□□□ -0.67
HMGB2-202ENST00000438704 E9PCH4 1651 aa10.89□□□□□ -0.67
HMGB2-202ENST00000438704 MAP3K7O43318 606 aa10.88□□□□□ -0.67
HMGB2-202ENST00000438704 SEPT9Q9UHD8 586 aaPredicted RBP10.88□□□□□ -0.67
HMGB2-202ENST00000438704 ARHGAP31Q2M1Z3 1444 aa10.87□□□□□ -0.67
HMGB2-202ENST00000438704 YEATS2Q9ULM3 1422 aa10.87□□□□□ -0.67
HMGB2-202ENST00000438704 SPATA31E1Q6ZUB1 1445 aa10.86□□□□□ -0.67
HMGB2-202ENST00000438704 ABCC3O15438 1527 aa10.86□□□□□ -0.67
HMGB2-202ENST00000438704 ZC3H13Q5T200 1668 aaKnown RBP10.85□□□□□ -0.67
HMGB2-202ENST00000438704 ARHGEF40Q8TER5 1519 aa10.85□□□□□ -0.67
HMGB2-202ENST00000438704 SPHKAPQ2M3C7 1700 aa10.85□□□□□ -0.67
HMGB2-202ENST00000438704 TSR1Q2NL82 804 aaKnown RBP10.85□□□□□ -0.67
HMGB2-202ENST00000438704 PACS2Q86VP3 889 aa10.85□□□□□ -0.67
HMGB2-202ENST00000438704 CERKQ8TCT0 537 aa10.85□□□□□ -0.67
HMGB2-202ENST00000438704 COL17A1Q9UMD9 1497 aaPredicted RBP10.85□□□□□ -0.67
HMGB2-202ENST00000438704 TSPOAP1O95153 1857 aa10.85□□□□□ -0.67
HMGB2-202ENST00000438704 DIEXFQ68CQ4 756 aaKnown RBP10.84□□□□□ -0.67
HMGB2-202ENST00000438704 LRCH3Q96II8 777 aa10.84□□□□□ -0.67
HMGB2-202ENST00000438704 WDR70Q9NW82 654 aa10.84□□□□□ -0.67
HMGB2-202ENST00000438704 RALGAPBQ86X10 1494 aa10.83□□□□□ -0.68
HMGB2-202ENST00000438704 NBPF8Q3BBV2 869 aa10.83□□□□□ -0.68
HMGB2-202ENST00000438704 WBP1LQ9NX94 342 aa10.83□□□□□ -0.68
HMGB2-202ENST00000438704 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.83□□□□□ -0.68
HMGB2-202ENST00000438704 TSR3Q9UJK0 312 aaKnown RBP10.83□□□□□ -0.68
HMGB2-202ENST00000438704 TSKSQ9UJT2 592 aa10.83□□□□□ -0.68
HMGB2-202ENST00000438704 CNTLNQ9NXG0 1405 aa10.83□□□□□ -0.68
HMGB2-202ENST00000438704 PAXIP1Q6ZW49 1069 aaPredicted RBP10.82□□□□□ -0.68
HMGB2-202ENST00000438704 NOS1P29475 1434 aa10.82□□□□□ -0.68
HMGB2-202ENST00000438704 NPATQ14207 1427 aa10.82□□□□□ -0.68
HMGB2-202ENST00000438704 PRAG1Q86YV5 1406 aa10.81□□□□□ -0.68
HMGB2-202ENST00000438704 CEP152O94986 1710 aa10.81□□□□□ -0.68
HMGB2-202ENST00000438704 GPRASP1Q5JY77 1395 aa10.8□□□□□ -0.68
HMGB2-202ENST00000438704 CFAP44Q96MT7 982 aa10.8□□□□□ -0.68
HMGB2-202ENST00000438704 RTN4Q9NQC3 1192 aaKnown RBP10.8□□□□□ -0.68
HMGB2-202ENST00000438704 CLTCL1P53675 1640 aa10.8□□□□□ -0.68
HMGB2-202ENST00000438704 CAMSAP1Q5T5Y3 1602 aa10.8□□□□□ -0.68
HMGB2-202ENST00000438704 PRSS12P56730 875 aa10.79□□□□□ -0.68
HMGB2-202ENST00000438704 CDCA7LQ96GN5 454 aa10.79□□□□□ -0.68
HMGB2-202ENST00000438704 HPS5Q9UPZ3 1129 aa10.79□□□□□ -0.68
HMGB2-202ENST00000438704 LAMC1P11047 1609 aa10.78□□□□□ -0.68
HMGB2-202ENST00000438704 EIF4G2P78344 907 aaKnown RBP eCLIP10.78□□□□□ -0.682e-52■□□□□ 9.1
HMGB2-202ENST00000438704 KCNC4Q03721 635 aa10.78□□□□□ -0.68
HMGB2-202ENST00000438704 RBM27Q9P2N5 1060 aaKnown RBP10.78□□□□□ -0.68
HMGB2-202ENST00000438704 WASHC2CQ9Y4E1 1318 aa10.78□□□□□ -0.68
HMGB2-202ENST00000438704 MYOM2P54296 1465 aa10.77□□□□□ -0.69
HMGB2-202ENST00000438704 GGT6Q6P531 493 aa10.77□□□□□ -0.69
HMGB2-202ENST00000438704 IRX2Q9BZI1 471 aaPredicted RBP10.77□□□□□ -0.69
HMGB2-202ENST00000438704 ADGRB3O60242 1522 aa10.77□□□□□ -0.69
HMGB2-202ENST00000438704 PIK3C2BO00750 1634 aa10.76□□□□□ -0.69
HMGB2-202ENST00000438704 GRXCR2A6NFK2 248 aa10.76□□□□□ -0.69
HMGB2-202ENST00000438704 NBPF26B4DH59 902 aa10.76□□□□□ -0.69
HMGB2-202ENST00000438704 NRXN1Q9ULB1 1477 aa10.75□□□□□ -0.69
HMGB2-202ENST00000438704 HSPA5P11021 654 aaKnown RBP10.75□□□□□ -0.69
HMGB2-202ENST00000438704 DCAF11Q8TEB1 546 aa10.75□□□□□ -0.69
HMGB2-202ENST00000438704 TRPM1Q7Z4N2 1603 aa10.75□□□□□ -0.69
HMGB2-202ENST00000438704 PRIM1P49642 420 aaKnown RBP10.74□□□□□ -0.69
HMGB2-202ENST00000438704 ARID4BQ4LE39 1312 aaPredicted RBP10.74□□□□□ -0.69
HMGB2-202ENST00000438704 RPGRIP1LQ68CZ1 1315 aa10.74□□□□□ -0.69
HMGB2-202ENST00000438704 SYNMO15061 1565 aa10.73□□□□□ -0.69
HMGB2-202ENST00000438704 MADDQ8WXG6 1647 aa10.73□□□□□ -0.69
HMGB2-202ENST00000438704 KIAA1210Q9ULL0 1709 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms