RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 NGDNQ8NEJ9 315 aaKnown RBP26.49■■□□□ 1.83
GTF3A-204ENST00000438571 NUDT16Q96DE0 195 aaKnown RBP26.47■■□□□ 1.83
GTF3A-204ENST00000438571 PAK3O75914 559 aaPredicted RBP26.46■■□□□ 1.83
GTF3A-204ENST00000438571 NBPF1Q3BBV0 1214 aa26.46■■□□□ 1.83
GTF3A-204ENST00000438571 BTG4Q9NY30 223 aa26.46■■□□□ 1.83
GTF3A-204ENST00000438571 BLMP54132 1417 aaPredicted RBP26.46■■□□□ 1.83
GTF3A-204ENST00000438571 THSD7AQ9UPZ6 1657 aa26.45■■□□□ 1.82
GTF3A-204ENST00000438571 CDK19Q9BWU1 502 aa26.44■■□□□ 1.82
GTF3A-204ENST00000438571 NRKQ7Z2Y5 1582 aa26.44■■□□□ 1.82
GTF3A-204ENST00000438571 ONECUT3O60422 494 aaPredicted RBP26.42■■□□□ 1.82
GTF3A-204ENST00000438571 CCDC125Q86Z20 511 aa26.42■■□□□ 1.82
GTF3A-204ENST00000438571 TRPM1Q7Z4N2 1603 aa26.42■■□□□ 1.82
GTF3A-204ENST00000438571 DEFB132Q7Z7B7 95 aa26.41■■□□□ 1.82
GTF3A-204ENST00000438571 FAM98CQ17RN3 349 aaKnown RBP26.4■■□□□ 1.82
GTF3A-204ENST00000438571 POLR3AO14802 1390 aaPredicted RBP26.4■■□□□ 1.82
GTF3A-204ENST00000438571 RGPD1P0DJD0 1748 aa26.39■■□□□ 1.82
GTF3A-204ENST00000438571 TNS1Q9HBL0 1735 aaKnown RBP26.39■■□□□ 1.81
GTF3A-204ENST00000438571 SRCAPQ6ZRS2 3230 aa26.38■■□□□ 1.81
GTF3A-204ENST00000438571 KIAA0232Q92628 1395 aa26.38■■□□□ 1.81
GTF3A-204ENST00000438571 NUTM2GQ5VZR2 741 aa26.38■■□□□ 1.81
GTF3A-204ENST00000438571 KRT27Q7Z3Y8 459 aa26.38■■□□□ 1.81
GTF3A-204ENST00000438571 ACEP12821 1306 aa26.38■■□□□ 1.81
GTF3A-204ENST00000438571 A0A0G2JS52 829 aa26.37■■□□□ 1.81
GTF3A-204ENST00000438571 MYT1Q01538 1121 aa26.37■■□□□ 1.81
GTF3A-204ENST00000438571 LMO7Q8WWI1 1683 aa26.36■■□□□ 1.81
GTF3A-204ENST00000438571 ZRANB1Q9UGI0 708 aa26.36■■□□□ 1.81
GTF3A-204ENST00000438571 CHRNA2Q15822 529 aa26.35■■□□□ 1.81
GTF3A-204ENST00000438571 PRDM11Q9NQV5 511 aa26.35■■□□□ 1.81
GTF3A-204ENST00000438571 SPATA31A5Q5VU36 1347 aa26.35■■□□□ 1.81
GTF3A-204ENST00000438571 SPATA31A7Q8IWB4 1347 aa26.35■■□□□ 1.81
GTF3A-204ENST00000438571 CCDC61Q9Y6R9 512 aa26.33■■□□□ 1.81
GTF3A-204ENST00000438571 PPIP5K1Q6PFW1 1433 aa26.32■■□□□ 1.8
GTF3A-204ENST00000438571 NBPF8Q3BBV2 869 aa26.32■■□□□ 1.8
GTF3A-204ENST00000438571 FAM182BQ5T319 152 aa26.32■■□□□ 1.8
GTF3A-204ENST00000438571 PLEKHG3A1L390 1219 aa26.31■■□□□ 1.8
GTF3A-204ENST00000438571 ZC3H6P61129 1189 aaKnown RBP26.31■■□□□ 1.8
GTF3A-204ENST00000438571 CENPJQ9HC77 1338 aaPredicted RBP26.31■■□□□ 1.8
GTF3A-204ENST00000438571 CAMTA1Q9Y6Y1 1673 aa26.29■■□□□ 1.8
GTF3A-204ENST00000438571 AKAP12Q02952 1782 aa26.29■■□□□ 1.8
GTF3A-204ENST00000438571 L3MBTL2Q969R5 705 aa26.29■■□□□ 1.8
GTF3A-204ENST00000438571 SIN3AQ96ST3 1273 aa26.29■■□□□ 1.8
GTF3A-204ENST00000438571 CABP2Q9NPB3 220 aa26.29■■□□□ 1.8
GTF3A-204ENST00000438571 PIK3C2AO00443 1686 aa26.28■■□□□ 1.8
GTF3A-204ENST00000438571 SRPK2P78362 688 aaKnown RBP26.27■■□□□ 1.8
GTF3A-204ENST00000438571 SF3B2Q13435 895 aaKnown RBP26.27■■□□□ 1.8
GTF3A-204ENST00000438571 STRN4Q9NRL3 753 aa26.27■■□□□ 1.8
GTF3A-204ENST00000438571 SPATA31A1Q5TZJ5 1347 aa26.26■■□□□ 1.79
GTF3A-204ENST00000438571 USP19O94966 1318 aa26.25■■□□□ 1.79
GTF3A-204ENST00000438571 SSH2Q76I76 1423 aa26.24■■□□□ 1.79
GTF3A-204ENST00000438571 ABTB2Q8N961 1025 aa26.24■■□□□ 1.79
GTF3A-204ENST00000438571 RGPD5Q99666 1765 aa26.24■■□□□ 1.79
GTF3A-204ENST00000438571 WNK3Q9BYP7 1800 aa26.22■■□□□ 1.79
GTF3A-204ENST00000438571 LRP5O75197 1615 aa26.21■■□□□ 1.79
GTF3A-204ENST00000438571 COL18A1P39060 1754 aa26.21■■□□□ 1.79
GTF3A-204ENST00000438571 USP6P35125 1406 aa26.21■■□□□ 1.79
GTF3A-204ENST00000438571 SLIT3O75094 1523 aa26.2■■□□□ 1.79
GTF3A-204ENST00000438571 PARP4Q9UKK3 1724 aaKnown RBP26.2■■□□□ 1.79
GTF3A-204ENST00000438571 USP35Q9P2H5 1018 aa26.2■■□□□ 1.78
GTF3A-204ENST00000438571 CPDO75976 1380 aa26.2■■□□□ 1.78
GTF3A-204ENST00000438571 BAG6P46379 1132 aa26.18■■□□□ 1.78
GTF3A-204ENST00000438571 NEUROD1Q13562 356 aa26.18■■□□□ 1.78
GTF3A-204ENST00000438571 CABP1Q9NZU7 370 aa26.17■■□□□ 1.78
GTF3A-204ENST00000438571 COL5A2P05997 1499 aaPredicted RBP26.17■■□□□ 1.78
GTF3A-204ENST00000438571 RREB1Q92766 1687 aa26.16■■□□□ 1.78
GTF3A-204ENST00000438571 EN1Q05925 392 aaPredicted RBP26.16■■□□□ 1.78
GTF3A-204ENST00000438571 LARP1Q6PKG0 1096 aaKnown RBP26.16■■□□□ 1.78
GTF3A-204ENST00000438571 MON2Q7Z3U7 1717 aa26.16■■□□□ 1.78
GTF3A-204ENST00000438571 ROCK2O75116 1388 aaKnown RBP26.15■■□□□ 1.78
GTF3A-204ENST00000438571 SBF2Q86WG5 1849 aa26.14■■□□□ 1.78
GTF3A-204ENST00000438571 PSDA5PKW4 1024 aaPredicted RBP26.14■■□□□ 1.78
GTF3A-204ENST00000438571 GCP02774 474 aa26.14■■□□□ 1.78
GTF3A-204ENST00000438571 NUP188Q5SRE5 1749 aa26.14■■□□□ 1.77
GTF3A-204ENST00000438571 DISP2A7MBM2 1401 aa26.14■■□□□ 1.77
GTF3A-204ENST00000438571 NLRP13Q86W25 1043 aa26.13■■□□□ 1.77
GTF3A-204ENST00000438571 LRRC37A3O60309 1634 aa26.13■■□□□ 1.77
GTF3A-204ENST00000438571 EVA1CP58658 441 aa26.12■■□□□ 1.77
GTF3A-204ENST00000438571 BRD4O60885 1362 aaPredicted RBP26.1■■□□□ 1.77
GTF3A-204ENST00000438571 ZBTB7CA1YPR0 619 aa26.1■■□□□ 1.77
GTF3A-204ENST00000438571 PEAK1Q9H792 1746 aa26.1■■□□□ 1.77
GTF3A-204ENST00000438571 EVC2Q86UK5 1308 aa26.1■■□□□ 1.77
GTF3A-204ENST00000438571 TRIM37O94972 964 aa26.09■■□□□ 1.77
GTF3A-204ENST00000438571 BARGINQ6ZT62 677 aa26.09■■□□□ 1.77
GTF3A-204ENST00000438571 NLRP6P59044 892 aa26.08■■□□□ 1.77
GTF3A-204ENST00000438571 EZH2Q15910 746 aaKnown RBP26.08■■□□□ 1.77
GTF3A-204ENST00000438571 TCP11L2Q8N4U5 519 aa26.06■■□□□ 1.76
GTF3A-204ENST00000438571 CRB1P82279 1406 aa26.05■■□□□ 1.76
GTF3A-204ENST00000438571 USP54Q70EL1 1684 aa26.04■■□□□ 1.76
GTF3A-204ENST00000438571 FAM196AQ6ZSG2 479 aa26.04■■□□□ 1.76
GTF3A-204ENST00000438571 LTN1O94822 1766 aa26.04■■□□□ 1.76
GTF3A-204ENST00000438571 NFAT5O94916 1531 aa26.04■■□□□ 1.76
GTF3A-204ENST00000438571 CPSF1Q10570 1443 aaKnown RBP26.03■■□□□ 1.76
GTF3A-204ENST00000438571 TTC21BQ7Z4L5 1316 aa26.02■■□□□ 1.76
GTF3A-204ENST00000438571 AATKQ6ZMQ8 1374 aa26.02■■□□□ 1.76
GTF3A-204ENST00000438571 PDE3BQ13370 1112 aa26.01■■□□□ 1.75
GTF3A-204ENST00000438571 CAMKK2Q96RR4 588 aa26.01■■□□□ 1.75
GTF3A-204ENST00000438571 R3HDM1Q15032 1099 aaKnown RBP26■■□□□ 1.75
GTF3A-204ENST00000438571 AXIN2Q9Y2T1 843 aa25.99■■□□□ 1.75
GTF3A-204ENST00000438571 THRAP3Q9Y2W1 955 aaKnown RBP25.99■■□□□ 1.75
GTF3A-204ENST00000438571 CD163L1Q9NR16 1453 aa25.98■■□□□ 1.75
GTF3A-204ENST00000438571 SOX12O15370 315 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms