RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 KRT28Q7Z3Y7 464 aa17.87■□□□□ 0.45
RTN4-211ENST00000438462 ARXQ96QS3 562 aa17.86■□□□□ 0.45
RTN4-211ENST00000438462 DAPK1P53355 1430 aa17.85■□□□□ 0.45
RTN4-211ENST00000438462 MTFR1LQ9H019 292 aa17.85■□□□□ 0.45
RTN4-211ENST00000438462 FMN2Q9NZ56 1722 aa17.84■□□□□ 0.45
RTN4-211ENST00000438462 NAIPQ13075 1403 aa17.83■□□□□ 0.45
RTN4-211ENST00000438462 ANKRD30AQ9BXX3 1397 aa17.83■□□□□ 0.45
RTN4-211ENST00000438462 SPATA31A1Q5TZJ5 1347 aa17.83■□□□□ 0.44
RTN4-211ENST00000438462 LMOD2Q6P5Q4 547 aa17.83■□□□□ 0.44
RTN4-211ENST00000438462 WDR90Q96KV7 1748 aa17.83■□□□□ 0.44
RTN4-211ENST00000438462 ARHGEF10O15013 1369 aa17.82■□□□□ 0.44
RTN4-211ENST00000438462 ZNF526Q8TF50 670 aaPredicted RBP17.82■□□□□ 0.44
RTN4-211ENST00000438462 BCL11BQ9C0K0 894 aaPredicted RBP17.82■□□□□ 0.44
RTN4-211ENST00000438462 PDE3BQ13370 1112 aa17.81■□□□□ 0.44
RTN4-211ENST00000438462 TECPR2O15040 1411 aa17.81■□□□□ 0.44
RTN4-211ENST00000438462 ZNF326Q5BKZ1 582 aaKnown RBP17.8■□□□□ 0.44
RTN4-211ENST00000438462 WWC3Q9ULE0 1092 aa17.8■□□□□ 0.44
RTN4-211ENST00000438462 SBNO1A3KN83 1393 aa17.79■□□□□ 0.44
RTN4-211ENST00000438462 KLHL34Q8N239 644 aa17.78■□□□□ 0.44
RTN4-211ENST00000438462 CHIC2Q9UKJ5 165 aa17.78■□□□□ 0.44
RTN4-211ENST00000438462 ADCY9O60503 1353 aa17.78■□□□□ 0.44
RTN4-211ENST00000438462 SBF2Q86WG5 1849 aa17.77■□□□□ 0.44
RTN4-211ENST00000438462 RGPD8O14715 1765 aaPredicted RBP17.76■□□□□ 0.43
RTN4-211ENST00000438462 PLSCR1O15162 318 aa17.76■□□□□ 0.43
RTN4-211ENST00000438462 PSME1Q06323 249 aa17.76■□□□□ 0.43
RTN4-211ENST00000438462 PEAK1Q9H792 1746 aa17.75■□□□□ 0.43
RTN4-211ENST00000438462 CRYBG1Q9Y4K1 1723 aa17.75■□□□□ 0.43
RTN4-211ENST00000438462 STK32BQ9NY57 414 aa17.75■□□□□ 0.43
RTN4-211ENST00000438462 JMYQ8N9B5 988 aa17.74■□□□□ 0.43
RTN4-211ENST00000438462 AATKQ6ZMQ8 1374 aa17.74■□□□□ 0.43
RTN4-211ENST00000438462 YBX3P16989 372 aaKnown RBP eCLIP17.73■□□□□ 0.432e-23■□□□□ 9.5
RTN4-211ENST00000438462 USP35Q9P2H5 1018 aa17.73■□□□□ 0.43
RTN4-211ENST00000438462 SLC15A2Q16348 729 aa17.72■□□□□ 0.43
RTN4-211ENST00000438462 KLRG1Q96E93 195 aa17.71■□□□□ 0.43
RTN4-211ENST00000438462 TRPM3Q9HCF6 1732 aaPredicted RBP17.71■□□□□ 0.43
RTN4-211ENST00000438462 PARP4Q9UKK3 1724 aaKnown RBP17.71■□□□□ 0.43
RTN4-211ENST00000438462 TNS2Q63HR2 1409 aa17.71■□□□□ 0.43
RTN4-211ENST00000438462 ANKRD50Q9ULJ7 1429 aa17.71■□□□□ 0.43
RTN4-211ENST00000438462 ALS2Q96Q42 1657 aa17.71■□□□□ 0.42
RTN4-211ENST00000438462 IFT172Q9UG01 1749 aa17.7■□□□□ 0.42
RTN4-211ENST00000438462 KIF3CO14782 793 aa17.7■□□□□ 0.42
RTN4-211ENST00000438462 GRIN3BO60391 1043 aa17.7■□□□□ 0.42
RTN4-211ENST00000438462 PROM2Q8N271 834 aa17.7■□□□□ 0.42
RTN4-211ENST00000438462 NLGN2Q8NFZ4 835 aa17.7■□□□□ 0.42
RTN4-211ENST00000438462 STRN4Q9NRL3 753 aa17.7■□□□□ 0.42
RTN4-211ENST00000438462 TOPAZ1Q8N9V7 1692 aa17.7■□□□□ 0.42
RTN4-211ENST00000438462 NRXN1Q9ULB1 1477 aa17.69■□□□□ 0.42
RTN4-211ENST00000438462 BARGINQ6ZT62 677 aa17.69■□□□□ 0.42
RTN4-211ENST00000438462 OVOS2A0A0G2JMS6 1433 aa17.69■□□□□ 0.42
RTN4-211ENST00000438462 OVOS2A0A0J9YW53 1432 aa17.69■□□□□ 0.42
RTN4-211ENST00000438462 OVOS2Q6IE36 1432 aa17.69■□□□□ 0.42
RTN4-211ENST00000438462 PCNTO95613 3336 aa17.69■□□□□ 0.42
RTN4-211ENST00000438462 PRDM11Q9NQV5 511 aa17.68■□□□□ 0.42
RTN4-211ENST00000438462 PHF8Q9UPP1 1060 aa17.67■□□□□ 0.42
RTN4-211ENST00000438462 HTRA3P83110 453 aa17.65■□□□□ 0.42
RTN4-211ENST00000438462 PTF1AQ7RTS3 328 aa17.65■□□□□ 0.42
RTN4-211ENST00000438462 COL24A1Q17RW2 1714 aa17.63■□□□□ 0.41
RTN4-211ENST00000438462 SSH2Q76I76 1423 aa17.63■□□□□ 0.41
RTN4-211ENST00000438462 CLTCL1P53675 1640 aa17.62■□□□□ 0.41
RTN4-211ENST00000438462 PAPPAQ13219 1627 aa17.62■□□□□ 0.41
RTN4-211ENST00000438462 C11orf95C9JLR9 678 aaPredicted RBP17.62■□□□□ 0.41
RTN4-211ENST00000438462 DHX57Q6P158 1386 aaKnown RBP17.62■□□□□ 0.41
RTN4-211ENST00000438462 LRRC37A3O60309 1634 aa17.61■□□□□ 0.41
RTN4-211ENST00000438462 TXNRD1Q16881 649 aa17.61■□□□□ 0.41
RTN4-211ENST00000438462 FAM161AQ3B820 660 aa17.61■□□□□ 0.41
RTN4-211ENST00000438462 ATP7BP35670 1465 aa17.61■□□□□ 0.41
RTN4-211ENST00000438462 CHRNA2Q15822 529 aa17.6■□□□□ 0.41
RTN4-211ENST00000438462 WAPLQ7Z5K2 1190 aa17.6■□□□□ 0.41
RTN4-211ENST00000438462 KIAA0232Q92628 1395 aa17.6■□□□□ 0.41
RTN4-211ENST00000438462 PLEKHH1Q9ULM0 1364 aa17.6■□□□□ 0.41
RTN4-211ENST00000438462 ARHGEF28Q8N1W1 1705 aaKnown RBP17.6■□□□□ 0.41
RTN4-211ENST00000438462 PHRF1Q9P1Y6 1649 aaKnown RBP17.59■□□□□ 0.41
RTN4-211ENST00000438462 KNDC1Q76NI1 1749 aa17.58■□□□□ 0.41
RTN4-211ENST00000438462 KIF1BO60333 1816 aa17.58■□□□□ 0.4
RTN4-211ENST00000438462 HSPA1AP0DMV8 641 aaKnown RBP17.57■□□□□ 0.4
RTN4-211ENST00000438462 HSPA1BP0DMV9 641 aaKnown RBP17.57■□□□□ 0.4
RTN4-211ENST00000438462 TCP11L2Q8N4U5 519 aa17.57■□□□□ 0.4
RTN4-211ENST00000438462 TOMM70O94826 608 aa17.56■□□□□ 0.4
RTN4-211ENST00000438462 POLD1P28340 1107 aa17.56■□□□□ 0.4
RTN4-211ENST00000438462 TULP4Q9NRJ4 1543 aa17.56■□□□□ 0.4
RTN4-211ENST00000438462 KANK4Q5T7N3 995 aaPredicted RBP17.55■□□□□ 0.4
RTN4-211ENST00000438462 AKAP12Q02952 1782 aa17.53■□□□□ 0.4
RTN4-211ENST00000438462 LARP1Q6PKG0 1096 aaKnown RBP17.53■□□□□ 0.4
RTN4-211ENST00000438462 EVA1CP58658 441 aa17.52■□□□□ 0.4
RTN4-211ENST00000438462 PMFBP1Q8TBY8 1022 aa17.52■□□□□ 0.4
RTN4-211ENST00000438462 VGFO15240 615 aaPredicted RBP17.51■□□□□ 0.39
RTN4-211ENST00000438462 QSER1Q2KHR3 1735 aa17.51■□□□□ 0.39
RTN4-211ENST00000438462 STK26Q9P289 416 aa17.51■□□□□ 0.39
RTN4-211ENST00000438462 PPLO60437 1756 aa17.51■□□□□ 0.39
RTN4-211ENST00000438462 THRAP3Q9Y2W1 955 aaKnown RBP17.5■□□□□ 0.39
RTN4-211ENST00000438462 LMO7Q8WWI1 1683 aa17.5■□□□□ 0.39
RTN4-211ENST00000438462 KIAA1210Q9ULL0 1709 aa17.5■□□□□ 0.39
RTN4-211ENST00000438462 ZNF827Q17R98 1081 aa17.48■□□□□ 0.39
RTN4-211ENST00000438462 WNK3Q9BYP7 1800 aa17.47■□□□□ 0.39
RTN4-211ENST00000438462 ZC3H6P61129 1189 aaKnown RBP17.46■□□□□ 0.39
RTN4-211ENST00000438462 TUBGCP6Q96RT7 1819 aa17.46■□□□□ 0.39
RTN4-211ENST00000438462 NUP155O75694 1391 aa17.45■□□□□ 0.38
RTN4-211ENST00000438462 GPRASP1Q5JY77 1395 aa17.45■□□□□ 0.38
RTN4-211ENST00000438462 BCL9O00512 1426 aa17.45■□□□□ 0.38
RTN4-211ENST00000438462 SLC16A10Q8TF71 515 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms