RNA–Protein interactions for RNA: ENST00000438045.5

PEX1-204, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 2 BASIC

Gene PEX1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-204ENST00000438045 PRKAR2BP31323 418 aa17.5■□□□□ 0.39
PEX1-204ENST00000438045 SKAP1Q86WV1 359 aa17.5■□□□□ 0.39
PEX1-204ENST00000438045 ABTB2Q8N961 1025 aa17.5■□□□□ 0.39
PEX1-204ENST00000438045 BCAR3O75815 825 aa17.49■□□□□ 0.39
PEX1-204ENST00000438045 CCDC136Q96JN2 1154 aa17.49■□□□□ 0.39
PEX1-204ENST00000438045 HSP90AB2PQ58FF8 381 aa17.49■□□□□ 0.39
PEX1-204ENST00000438045 PSME1Q06323 249 aa17.48■□□□□ 0.39
PEX1-204ENST00000438045 DCTN1Q14203 1278 aa17.48■□□□□ 0.39
PEX1-204ENST00000438045 AEBP1Q8IUX7 1158 aa17.48■□□□□ 0.39
PEX1-204ENST00000438045 UBR1Q8IWV7 1749 aa17.48■□□□□ 0.39
PEX1-204ENST00000438045 TTC21BQ7Z4L5 1316 aa17.47■□□□□ 0.39
PEX1-204ENST00000438045 CLUAP1Q96AJ1 413 aa17.47■□□□□ 0.39
PEX1-204ENST00000438045 RUNDC1Q96C34 613 aa17.47■□□□□ 0.39
PEX1-204ENST00000438045 AMPHP49418 695 aa17.46■□□□□ 0.39
PEX1-204ENST00000438045 RIPK4P57078 832 aa17.46■□□□□ 0.39
PEX1-204ENST00000438045 WWC1Q8IX03 1113 aa17.46■□□□□ 0.39
PEX1-204ENST00000438045 USHBP1Q8N6Y0 703 aa17.46■□□□□ 0.39
PEX1-204ENST00000438045 CD163L1Q9NR16 1453 aa17.45■□□□□ 0.38
PEX1-204ENST00000438045 NRXN3Q9Y4C0 1643 aa17.45■□□□□ 0.38
PEX1-204ENST00000438045 NEFMP07197 916 aa17.45■□□□□ 0.38
PEX1-204ENST00000438045 RRP1P56182 461 aaKnown RBP17.45■□□□□ 0.38
PEX1-204ENST00000438045 PHACTR3Q96KR7 559 aa17.45■□□□□ 0.38
PEX1-204ENST00000438045 SMG6Q86US8 1419 aaKnown RBP17.45■□□□□ 0.38
PEX1-204ENST00000438045 FAM83GA6ND36 823 aa17.44■□□□□ 0.38
PEX1-204ENST00000438045 DUSP27Q5VZP5 1158 aa17.43■□□□□ 0.38
PEX1-204ENST00000438045 SULT6B1Q6IMI4 303 aa17.43■□□□□ 0.38
PEX1-204ENST00000438045 PELP1Q8IZL8 1130 aaKnown RBP17.42■□□□□ 0.38
PEX1-204ENST00000438045 CRBNQ96SW2 442 aa17.42■□□□□ 0.38
PEX1-204ENST00000438045 PHF8Q9UPP1 1060 aa17.42■□□□□ 0.38
PEX1-204ENST00000438045 CPS1P31327 1500 aa17.41■□□□□ 0.38
PEX1-204ENST00000438045 MYO3AQ8NEV4 1616 aa17.41■□□□□ 0.38
PEX1-204ENST00000438045 TNNQ9UQP3 1299 aa17.41■□□□□ 0.38
PEX1-204ENST00000438045 NPC1L1Q9UHC9 1359 aa17.41■□□□□ 0.38
PEX1-204ENST00000438045 KDM4FA0A1W2PPD8 638 aa17.41■□□□□ 0.38
PEX1-204ENST00000438045 CEP170BQ9Y4F5 1589 aaPredicted RBP17.41■□□□□ 0.38
PEX1-204ENST00000438045 CABLES1Q8TDN4 633 aa17.4■□□□□ 0.38
PEX1-204ENST00000438045 ZNF692Q9BU19 519 aaPredicted RBP17.4■□□□□ 0.38
PEX1-204ENST00000438045 PPP4R2Q9NY27 417 aa17.4■□□□□ 0.38
PEX1-204ENST00000438045 POLR3AO14802 1390 aaPredicted RBP17.39■□□□□ 0.37
PEX1-204ENST00000438045 SLFN5Q08AF3 891 aa17.39■□□□□ 0.37
PEX1-204ENST00000438045 TMPOP42166 694 aaKnown RBP17.38■□□□□ 0.37
PEX1-204ENST00000438045 ZC3H6P61129 1189 aaKnown RBP17.38■□□□□ 0.37
PEX1-204ENST00000438045 PUS7Q96PZ0 661 aaKnown RBP17.38■□□□□ 0.37
PEX1-204ENST00000438045 BLMP54132 1417 aaPredicted RBP17.38■□□□□ 0.37
PEX1-204ENST00000438045 MIS18AQ9NYP9 233 aa17.38■□□□□ 0.37
PEX1-204ENST00000438045 PDE3BQ13370 1112 aa17.37■□□□□ 0.37
PEX1-204ENST00000438045 ATP7BP35670 1465 aa17.37■□□□□ 0.37
PEX1-204ENST00000438045 NPHP4O75161 1426 aaPredicted RBP17.36■□□□□ 0.37
PEX1-204ENST00000438045 PANK1Q8TE04 598 aa17.36■□□□□ 0.37
PEX1-204ENST00000438045 ATF3P18847 181 aa17.36■□□□□ 0.37
PEX1-204ENST00000438045 MAP3K19Q56UN5 1328 aa17.36■□□□□ 0.37
PEX1-204ENST00000438045 NKTRP30414 1462 aaKnown RBP17.36■□□□□ 0.37
PEX1-204ENST00000438045 EIF4A2Q14240 407 aaKnown RBP17.36■□□□□ 0.37
PEX1-204ENST00000438045 FAM135BQ49AJ0 1406 aa17.35■□□□□ 0.37
PEX1-204ENST00000438045 NINLQ9Y2I6 1382 aa17.35■□□□□ 0.37
PEX1-204ENST00000438045 EXOSC9Q06265 439 aaKnown RBP17.34■□□□□ 0.37
PEX1-204ENST00000438045 MCM10Q7L590 875 aa17.34■□□□□ 0.37
PEX1-204ENST00000438045 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.34■□□□□ 0.37
PEX1-204ENST00000438045 EDC4Q6P2E9 1401 aaKnown RBP17.34■□□□□ 0.37
PEX1-204ENST00000438045 E9PSI1 815 aa17.34■□□□□ 0.37
PEX1-204ENST00000438045 COG6Q9Y2V7 657 aa17.33■□□□□ 0.37
PEX1-204ENST00000438045 PLEKHG3A1L390 1219 aa17.33■□□□□ 0.36
PEX1-204ENST00000438045 ZNF335Q9H4Z2 1342 aaPredicted RBP17.32■□□□□ 0.36
PEX1-204ENST00000438045 NSD2O96028 1365 aa17.32■□□□□ 0.36
PEX1-204ENST00000438045 ARHGAP23Q9P227 1491 aa17.32■□□□□ 0.36
PEX1-204ENST00000438045 NECTIN2Q92692 538 aa17.32■□□□□ 0.36
PEX1-204ENST00000438045 IL13P35225 146 aa17.31■□□□□ 0.36
PEX1-204ENST00000438045 KRT24Q2M2I5 525 aa17.31■□□□□ 0.36
PEX1-204ENST00000438045 LRRC59Q96AG4 307 aaKnown RBP17.31■□□□□ 0.36
PEX1-204ENST00000438045 SIRT1Q96EB6 747 aa17.31■□□□□ 0.36
PEX1-204ENST00000438045 TSHZ2Q9NRE2 1034 aa17.31■□□□□ 0.36
PEX1-204ENST00000438045 CPSF1Q10570 1443 aaKnown RBP17.31■□□□□ 0.36
PEX1-204ENST00000438045 TRIM35Q9UPQ4 493 aa17.3■□□□□ 0.36
PEX1-204ENST00000438045 RSPH6AQ9H0K4 717 aa17.3■□□□□ 0.36
PEX1-204ENST00000438045 SLIT1O75093 1534 aa17.3■□□□□ 0.36
PEX1-204ENST00000438045 USP6P35125 1406 aa17.3■□□□□ 0.36
PEX1-204ENST00000438045 SETD1AO15047 1707 aaKnown RBP17.29■□□□□ 0.36
PEX1-204ENST00000438045 CHRNA2Q15822 529 aa17.29■□□□□ 0.36
PEX1-204ENST00000438045 DLC1Q96QB1 1528 aa17.29■□□□□ 0.36
PEX1-204ENST00000438045 HAP1P54257 671 aaPredicted RBP17.29■□□□□ 0.36
PEX1-204ENST00000438045 TECPR2O15040 1411 aa17.29■□□□□ 0.36
PEX1-204ENST00000438045 TMEM94Q12767 1356 aa17.29■□□□□ 0.36
PEX1-204ENST00000438045 PLEKHF1Q96S99 279 aa17.29■□□□□ 0.36
PEX1-204ENST00000438045 ZNF521Q96K83 1311 aa17.28■□□□□ 0.36
PEX1-204ENST00000438045 KRT28Q7Z3Y7 464 aa17.28■□□□□ 0.36
PEX1-204ENST00000438045 SMC4Q9NTJ3 1288 aa17.28■□□□□ 0.36
PEX1-204ENST00000438045 SETD1BQ9UPS6 1966 aaKnown RBP17.28■□□□□ 0.36
PEX1-204ENST00000438045 ZNF428Q96B54 188 aa17.28■□□□□ 0.36
PEX1-204ENST00000438045 MED14O60244 1454 aa17.27■□□□□ 0.36
PEX1-204ENST00000438045 FANCIQ9NVI1 1328 aa17.26■□□□□ 0.35
PEX1-204ENST00000438045 FCHSD2O94868 740 aa17.25■□□□□ 0.35
PEX1-204ENST00000438045 EYA1Q99502 592 aa17.25■□□□□ 0.35
PEX1-204ENST00000438045 TSPYL6Q8N831 410 aa17.24■□□□□ 0.35
PEX1-204ENST00000438045 DIP2AQ14689 1571 aa17.24■□□□□ 0.35
PEX1-204ENST00000438045 MYH16Q9H6N6 1097 aa17.24■□□□□ 0.35
PEX1-204ENST00000438045 RGS3P49796 1198 aa17.24■□□□□ 0.35
PEX1-204ENST00000438045 C19orf44Q9H6X5 657 aa17.24■□□□□ 0.35
PEX1-204ENST00000438045 USP35Q9P2H5 1018 aa17.24■□□□□ 0.35
PEX1-204ENST00000438045 CSB-PGBD3P0DP91 1061 aa17.23■□□□□ 0.35
PEX1-204ENST00000438045 RGPD8O14715 1765 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms