RNA–Protein interactions for RNA: ENST00000438014.5

R3HDM1-208, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-208ENST00000438014 KIF12Q96FN5 646 aa12.78□□□□□ -0.36
R3HDM1-208ENST00000438014 METP08581 1390 aa12.78□□□□□ -0.36
R3HDM1-208ENST00000438014 BCL9LQ86UU0 1499 aa12.78□□□□□ -0.36
R3HDM1-208ENST00000438014 UNC5CLQ8IV45 518 aa12.77□□□□□ -0.37
R3HDM1-208ENST00000438014 ADGRL2O95490 1459 aa12.77□□□□□ -0.37
R3HDM1-208ENST00000438014 NLRP6P59044 892 aa12.76□□□□□ -0.37
R3HDM1-208ENST00000438014 EFCAB3Q8N7B9 438 aa12.76□□□□□ -0.37
R3HDM1-208ENST00000438014 CABP2Q9NPB3 220 aa12.76□□□□□ -0.37
R3HDM1-208ENST00000438014 UNC13BO14795 1591 aa12.76□□□□□ -0.37
R3HDM1-208ENST00000438014 SOX12O15370 315 aa12.75□□□□□ -0.37
R3HDM1-208ENST00000438014 HRCP23327 699 aa12.75□□□□□ -0.37
R3HDM1-208ENST00000438014 CHRDL2Q6WN34 429 aa12.75□□□□□ -0.37
R3HDM1-208ENST00000438014 NPHP3Q7Z494 1330 aa12.75□□□□□ -0.37
R3HDM1-208ENST00000438014 XRN1Q8IZH2 1706 aaKnown RBP12.75□□□□□ -0.37
R3HDM1-208ENST00000438014 FAM50AQ14320 339 aaKnown RBP12.74□□□□□ -0.37
R3HDM1-208ENST00000438014 PIP4P2Q8N4L2 257 aa12.74□□□□□ -0.37
R3HDM1-208ENST00000438014 LRP5O75197 1615 aa12.73□□□□□ -0.37
R3HDM1-208ENST00000438014 PSDA5PKW4 1024 aaPredicted RBP12.73□□□□□ -0.37
R3HDM1-208ENST00000438014 BAG6P46379 1132 aa12.73□□□□□ -0.37
R3HDM1-208ENST00000438014 ESCO1Q5FWF5 840 aa12.73□□□□□ -0.37
R3HDM1-208ENST00000438014 SEPT12Q8IYM1 358 aa12.73□□□□□ -0.37
R3HDM1-208ENST00000438014 MYOM2P54296 1465 aa12.72□□□□□ -0.37
R3HDM1-208ENST00000438014 PPP1R37O75864 691 aa12.72□□□□□ -0.37
R3HDM1-208ENST00000438014 FBXO22Q8NEZ5 403 aa12.72□□□□□ -0.37
R3HDM1-208ENST00000438014 LAMC1P11047 1609 aa12.72□□□□□ -0.37
R3HDM1-208ENST00000438014 LRPPRCP42704 1394 aaKnown RBP12.71□□□□□ -0.37
R3HDM1-208ENST00000438014 KRT27Q7Z3Y8 459 aa12.71□□□□□ -0.37
R3HDM1-208ENST00000438014 RALGAPBQ86X10 1494 aa12.71□□□□□ -0.38
R3HDM1-208ENST00000438014 FOXO3O43524 673 aa12.7□□□□□ -0.38
R3HDM1-208ENST00000438014 ONECUT3O60422 494 aaPredicted RBP12.7□□□□□ -0.38
R3HDM1-208ENST00000438014 PHF8Q9UPP1 1060 aa12.7□□□□□ -0.38
R3HDM1-208ENST00000438014 NUP155O75694 1391 aa12.69□□□□□ -0.38
R3HDM1-208ENST00000438014 YY1P25490 414 aa12.69□□□□□ -0.38
R3HDM1-208ENST00000438014 VPS72Q15906 364 aa12.69□□□□□ -0.38
R3HDM1-208ENST00000438014 COL22A1Q8NFW1 1626 aaPredicted RBP12.69□□□□□ -0.38
R3HDM1-208ENST00000438014 CCDC9Q9Y3X0 531 aaKnown RBP12.68□□□□□ -0.38
R3HDM1-208ENST00000438014 NRXN3Q9Y4C0 1643 aa12.68□□□□□ -0.38
R3HDM1-208ENST00000438014 XPCQ01831 940 aaPredicted RBP12.67□□□□□ -0.38
R3HDM1-208ENST00000438014 ROBO2Q9HCK4 1378 aa12.67□□□□□ -0.38
R3HDM1-208ENST00000438014 SLIT2O94813 1529 aa12.67□□□□□ -0.38
R3HDM1-208ENST00000438014 E9PCH4 1651 aa12.67□□□□□ -0.38
R3HDM1-208ENST00000438014 EP400Q96L91 3159 aa12.66□□□□□ -0.38
R3HDM1-208ENST00000438014 HFM1A2PYH4 1435 aa12.66□□□□□ -0.38
R3HDM1-208ENST00000438014 NALCNQ8IZF0 1738 aa12.65□□□□□ -0.38
R3HDM1-208ENST00000438014 A0A0G2JS52 829 aa12.64□□□□□ -0.39
R3HDM1-208ENST00000438014 LOC105371045A0A1W2PR82 267 aa12.64□□□□□ -0.39
R3HDM1-208ENST00000438014 CD44P16070 742 aaKnown RBP12.64□□□□□ -0.39
R3HDM1-208ENST00000438014 MYT1Q01538 1121 aa12.64□□□□□ -0.39
R3HDM1-208ENST00000438014 R3HDM1Q15032 1099 aaKnown RBP12.64□□□□□ -0.39
R3HDM1-208ENST00000438014 LMOD2Q6P5Q4 547 aa12.64□□□□□ -0.39
R3HDM1-208ENST00000438014 GLI3P10071 1580 aa12.64□□□□□ -0.39
R3HDM1-208ENST00000438014 SPATA31A3Q5VYP0 1347 aa12.63□□□□□ -0.39
R3HDM1-208ENST00000438014 IQGAP3Q86VI3 1631 aa12.63□□□□□ -0.39
R3HDM1-208ENST00000438014 TULP1O00294 542 aaPredicted RBP12.63□□□□□ -0.39
R3HDM1-208ENST00000438014 EN1Q05925 392 aaPredicted RBP12.63□□□□□ -0.39
R3HDM1-208ENST00000438014 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.63□□□□□ -0.39
R3HDM1-208ENST00000438014 ARHGEF1Q92888 912 aaKnown RBP12.63□□□□□ -0.39
R3HDM1-208ENST00000438014 PXDNQ92626 1479 aa12.63□□□□□ -0.39
R3HDM1-208ENST00000438014 SPHKAPQ2M3C7 1700 aa12.62□□□□□ -0.39
R3HDM1-208ENST00000438014 ROCK1Q13464 1354 aa12.62□□□□□ -0.39
R3HDM1-208ENST00000438014 E2F4Q16254 413 aa12.62□□□□□ -0.39
R3HDM1-208ENST00000438014 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.62□□□□□ -0.39
R3HDM1-208ENST00000438014 PSME1Q06323 249 aa12.61□□□□□ -0.39
R3HDM1-208ENST00000438014 KRT28Q7Z3Y7 464 aa12.61□□□□□ -0.39
R3HDM1-208ENST00000438014 PHF12Q96QT6 1004 aa12.61□□□□□ -0.39
R3HDM1-208ENST00000438014 PRAG1Q86YV5 1406 aa12.61□□□□□ -0.39
R3HDM1-208ENST00000438014 RPGRIP1LQ68CZ1 1315 aa12.61□□□□□ -0.39
R3HDM1-208ENST00000438014 MARF1Q9Y4F3 1742 aaKnown RBP12.59□□□□□ -0.39
R3HDM1-208ENST00000438014 NUTM2FA1L443 756 aa12.59□□□□□ -0.39
R3HDM1-208ENST00000438014 GOLGA2Q08379 1002 aa12.59□□□□□ -0.39
R3HDM1-208ENST00000438014 NEXMIFQ5QGS0 1516 aa12.58□□□□□ -0.4
R3HDM1-208ENST00000438014 FAM98CQ17RN3 349 aaKnown RBP12.58□□□□□ -0.4
R3HDM1-208ENST00000438014 CCDC144AA2RUR9 1427 aa12.57□□□□□ -0.4
R3HDM1-208ENST00000438014 BRWD3Q6RI45 1802 aa12.57□□□□□ -0.4
R3HDM1-208ENST00000438014 FAM83GA6ND36 823 aa12.56□□□□□ -0.4
R3HDM1-208ENST00000438014 EZH2Q15910 746 aaKnown RBP12.56□□□□□ -0.4
R3HDM1-208ENST00000438014 CABLES1Q8TDN4 633 aa12.56□□□□□ -0.4
R3HDM1-208ENST00000438014 NAIPQ13075 1403 aa12.55□□□□□ -0.4
R3HDM1-208ENST00000438014 PDE4AP27815 886 aa12.55□□□□□ -0.4
R3HDM1-208ENST00000438014 MS4A4AQ96JQ5 239 aa12.55□□□□□ -0.4
R3HDM1-208ENST00000438014 TMEM106CQ9BVX2 250 aa12.55□□□□□ -0.4
R3HDM1-208ENST00000438014 CDC42BPGQ6DT37 1551 aa12.55□□□□□ -0.4
R3HDM1-208ENST00000438014 DISP2A7MBM2 1401 aa12.54□□□□□ -0.4
R3HDM1-208ENST00000438014 NBPF8Q3BBV2 869 aa12.54□□□□□ -0.4
R3HDM1-208ENST00000438014 NBPF14Q5TI25 921 aa12.54□□□□□ -0.4
R3HDM1-208ENST00000438014 WAPLQ7Z5K2 1190 aa12.54□□□□□ -0.4
R3HDM1-208ENST00000438014 CAMKK2Q96RR4 588 aa12.54□□□□□ -0.4
R3HDM1-208ENST00000438014 PPP1R1BQ9UD71 204 aaPredicted RBP12.54□□□□□ -0.4
R3HDM1-208ENST00000438014 USP32Q8NFA0 1604 aa12.53□□□□□ -0.4
R3HDM1-208ENST00000438014 LARP6Q9BRS8 491 aaKnown RBP12.53□□□□□ -0.4
R3HDM1-208ENST00000438014 STK26Q9P289 416 aa12.53□□□□□ -0.4
R3HDM1-208ENST00000438014 ARHGEF10O15013 1369 aa12.53□□□□□ -0.4
R3HDM1-208ENST00000438014 ITGAEP38570 1179 aa12.52□□□□□ -0.41
R3HDM1-208ENST00000438014 FAM182BQ5T319 152 aa12.52□□□□□ -0.41
R3HDM1-208ENST00000438014 FAM196AQ6ZSG2 479 aa12.52□□□□□ -0.41
R3HDM1-208ENST00000438014 BTG4Q9NY30 223 aa12.52□□□□□ -0.41
R3HDM1-208ENST00000438014 SBNO1A3KN83 1393 aa12.52□□□□□ -0.41
R3HDM1-208ENST00000438014 PARD3Q8TEW0 1356 aa12.52□□□□□ -0.41
R3HDM1-208ENST00000438014 TNS3Q68CZ2 1445 aa12.52□□□□□ -0.41
R3HDM1-208ENST00000438014 APBA3O96018 575 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms