RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 SIGLEC1Q9BZZ2 1709 aa15.67■□□□□ 0.1
TMEM116-202ENST00000437003 TRAK2O60296 914 aa15.67■□□□□ 0.1
TMEM116-202ENST00000437003 PDE3AQ14432 1141 aa15.66■□□□□ 0.1
TMEM116-202ENST00000437003 GLI2P10070 1586 aa15.66■□□□□ 0.1
TMEM116-202ENST00000437003 CFAP53Q96M91 514 aa15.66■□□□□ 0.1
TMEM116-202ENST00000437003 CABP2Q9NPB3 220 aa15.66■□□□□ 0.1
TMEM116-202ENST00000437003 PDZRN3Q9UPQ7 1066 aa15.66■□□□□ 0.1
TMEM116-202ENST00000437003 PCDHB15Q9Y5E8 787 aa15.66■□□□□ 0.1
TMEM116-202ENST00000437003 U2AF1L5P0DN76 240 aaPredicted RBP15.65■□□□□ 0.1
TMEM116-202ENST00000437003 U2AF1Q01081 240 aaKnown RBP eCLIP15.65■□□□□ 0.1
TMEM116-202ENST00000437003 AAMPQ13685 434 aa15.65■□□□□ 0.1
TMEM116-202ENST00000437003 STK26Q9P289 416 aa15.65■□□□□ 0.1
TMEM116-202ENST00000437003 RLBP1P12271 317 aa15.64■□□□□ 0.09
TMEM116-202ENST00000437003 RARSP54136 660 aaKnown RBP15.64■□□□□ 0.09
TMEM116-202ENST00000437003 PUS7Q96PZ0 661 aaKnown RBP15.64■□□□□ 0.09
TMEM116-202ENST00000437003 NEXMIFQ5QGS0 1516 aa15.63■□□□□ 0.09
TMEM116-202ENST00000437003 DIP2CQ9Y2E4 1556 aa15.63■□□□□ 0.09
TMEM116-202ENST00000437003 ANKRD36BQ8N2N9 1353 aa15.63■□□□□ 0.09
TMEM116-202ENST00000437003 PIK3C2BO00750 1634 aa15.63■□□□□ 0.09
TMEM116-202ENST00000437003 RRP9O43818 475 aaKnown RBP15.63■□□□□ 0.09
TMEM116-202ENST00000437003 MFAP1P55081 439 aaKnown RBP15.63■□□□□ 0.09
TMEM116-202ENST00000437003 MYH16Q9H6N6 1097 aa15.63■□□□□ 0.09
TMEM116-202ENST00000437003 SLC52A1Q9NWF4 448 aa15.63■□□□□ 0.09
TMEM116-202ENST00000437003 SHPRHQ149N8 1683 aa15.63■□□□□ 0.09
TMEM116-202ENST00000437003 ERBB4Q15303 1308 aa15.62■□□□□ 0.09
TMEM116-202ENST00000437003 MRE11P49959 708 aa15.62■□□□□ 0.09
TMEM116-202ENST00000437003 SRPK2P78362 688 aaKnown RBP15.62■□□□□ 0.09
TMEM116-202ENST00000437003 TULP4Q9NRJ4 1543 aa15.62■□□□□ 0.09
TMEM116-202ENST00000437003 ARHGAP31Q2M1Z3 1444 aa15.61■□□□□ 0.09
TMEM116-202ENST00000437003 PMFBP1Q8TBY8 1022 aa15.61■□□□□ 0.09
TMEM116-202ENST00000437003 GRPEL1Q9HAV7 217 aa15.61■□□□□ 0.09
TMEM116-202ENST00000437003 ARHGEF28Q8N1W1 1705 aaKnown RBP15.61■□□□□ 0.09
TMEM116-202ENST00000437003 CHMP5Q9NZZ3 219 aa15.61■□□□□ 0.09
TMEM116-202ENST00000437003 YEATS2Q9ULM3 1422 aa15.61■□□□□ 0.09
TMEM116-202ENST00000437003 ESPNB1AK53 854 aa15.6■□□□□ 0.09
TMEM116-202ENST00000437003 U2SURPO15042 1029 aaKnown RBP15.6■□□□□ 0.09
TMEM116-202ENST00000437003 USP32Q8NFA0 1604 aa15.6■□□□□ 0.09
TMEM116-202ENST00000437003 WDR63Q8IWG1 891 aa15.59■□□□□ 0.09
TMEM116-202ENST00000437003 NSD2O96028 1365 aa15.59■□□□□ 0.09
TMEM116-202ENST00000437003 TSR2Q969E8 191 aaKnown RBP15.59■□□□□ 0.09
TMEM116-202ENST00000437003 C22orf23Q9BZE7 217 aa15.59■□□□□ 0.09
TMEM116-202ENST00000437003 PHF23Q9BUL5 403 aaPredicted RBP15.58■□□□□ 0.09
TMEM116-202ENST00000437003 TRIM44Q96DX7 344 aaPredicted RBP15.58■□□□□ 0.08
TMEM116-202ENST00000437003 GGNBP2Q9H3C7 697 aa15.58■□□□□ 0.08
TMEM116-202ENST00000437003 IQSEC2Q5JU85 1478 aa15.58■□□□□ 0.08
TMEM116-202ENST00000437003 NINLQ9Y2I6 1382 aa15.58■□□□□ 0.08
TMEM116-202ENST00000437003 RICTORQ6R327 1708 aa15.57■□□□□ 0.08
TMEM116-202ENST00000437003 ZFYVE9O95405 1425 aa15.57■□□□□ 0.08
TMEM116-202ENST00000437003 MINK1Q8N4C8 1332 aaPredicted RBP15.57■□□□□ 0.08
TMEM116-202ENST00000437003 CCDC27Q2M243 656 aa15.57■□□□□ 0.08
TMEM116-202ENST00000437003 FBXO3Q9UK99 471 aa15.57■□□□□ 0.08
TMEM116-202ENST00000437003 A0A1W2PP64 1363 aa15.56■□□□□ 0.08
TMEM116-202ENST00000437003 FTSJ3Q8IY81 847 aaKnown RBP15.56■□□□□ 0.08
TMEM116-202ENST00000437003 PRAM1Q96QH2 718 aa15.56■□□□□ 0.08
TMEM116-202ENST00000437003 RWDD1Q9H446 243 aaPredicted RBP15.55■□□□□ 0.08
TMEM116-202ENST00000437003 FBXO31Q5XUX0 539 aaPredicted RBP15.55■□□□□ 0.08
TMEM116-202ENST00000437003 MYO5BQ9ULV0 1848 aa15.55■□□□□ 0.08
TMEM116-202ENST00000437003 HSCBQ8IWL3 235 aa15.54■□□□□ 0.08
TMEM116-202ENST00000437003 STAG3Q9UJ98 1225 aa15.54■□□□□ 0.08
TMEM116-202ENST00000437003 CYB5RLQ6IPT4 315 aa15.54■□□□□ 0.08
TMEM116-202ENST00000437003 TERF2IPQ9NYB0 399 aa15.54■□□□□ 0.08
TMEM116-202ENST00000437003 ABCC11Q96J66 1382 aa15.54■□□□□ 0.08
TMEM116-202ENST00000437003 GAS2L3Q86XJ1 694 aa15.53■□□□□ 0.08
TMEM116-202ENST00000437003 DDX11L8A8MPP1 907 aa15.53■□□□□ 0.08
TMEM116-202ENST00000437003 SMC4Q9NTJ3 1288 aa15.53■□□□□ 0.08
TMEM116-202ENST00000437003 ATAD2Q6PL18 1390 aa15.52■□□□□ 0.08
TMEM116-202ENST00000437003 TMEM131LA2VDJ0 1609 aa15.52■□□□□ 0.07
TMEM116-202ENST00000437003 PREX1Q8TCU6 1659 aa15.52■□□□□ 0.07
TMEM116-202ENST00000437003 EXOSC9Q06265 439 aaKnown RBP15.52■□□□□ 0.07
TMEM116-202ENST00000437003 FYB1O15117 783 aa15.51■□□□□ 0.07
TMEM116-202ENST00000437003 YTHDC2Q9H6S0 1430 aaKnown RBP15.51■□□□□ 0.07
TMEM116-202ENST00000437003 PTPRMP28827 1452 aa15.51■□□□□ 0.07
TMEM116-202ENST00000437003 ZKSCAN2Q63HK3 967 aa15.51■□□□□ 0.07
TMEM116-202ENST00000437003 FOXD4L1Q9NU39 408 aa15.51■□□□□ 0.07
TMEM116-202ENST00000437003 MVPQ14764 893 aaKnown RBP15.5■□□□□ 0.07
TMEM116-202ENST00000437003 DZIP1LQ8IYY4 767 aaKnown RBP15.5■□□□□ 0.07
TMEM116-202ENST00000437003 ITPRIPQ8IWB1 547 aa15.5■□□□□ 0.07
TMEM116-202ENST00000437003 ZNF692Q9BU19 519 aaPredicted RBP15.5■□□□□ 0.07
TMEM116-202ENST00000437003 PAXIP1Q6ZW49 1069 aaPredicted RBP15.49■□□□□ 0.07
TMEM116-202ENST00000437003 TNPO1Q92973 898 aaKnown RBP15.49■□□□□ 0.07
TMEM116-202ENST00000437003 RBM10P98175 930 aaKnown RBP15.49■□□□□ 0.07
TMEM116-202ENST00000437003 CDK19Q9BWU1 502 aa15.49■□□□□ 0.07
TMEM116-202ENST00000437003 FAM69CQ0P6D2 419 aa15.48■□□□□ 0.07
TMEM116-202ENST00000437003 HDGFL2Q7Z4V5 671 aaPredicted RBP15.48■□□□□ 0.07
TMEM116-202ENST00000437003 CNKSR2Q8WXI2 1034 aa15.48■□□□□ 0.07
TMEM116-202ENST00000437003 TMPOP42166 694 aaKnown RBP15.48■□□□□ 0.07
TMEM116-202ENST00000437003 PLEKHF1Q96S99 279 aa15.48■□□□□ 0.07
TMEM116-202ENST00000437003 CABP1Q9NZU7 370 aa15.47■□□□□ 0.07
TMEM116-202ENST00000437003 TRIM27P14373 513 aa15.47■□□□□ 0.07
TMEM116-202ENST00000437003 KIAA1211Q6ZU35 1233 aa15.47■□□□□ 0.07
TMEM116-202ENST00000437003 SSH1Q8WYL5 1049 aa15.47■□□□□ 0.07
TMEM116-202ENST00000437003 FBLN1P23142 703 aa15.47■□□□□ 0.07
TMEM116-202ENST00000437003 HSP90AB1P08238 724 aaKnown RBP15.46■□□□□ 0.07
TMEM116-202ENST00000437003 RIPK4P57078 832 aa15.46■□□□□ 0.06
TMEM116-202ENST00000437003 TRIM35Q9UPQ4 493 aa15.46■□□□□ 0.06
TMEM116-202ENST00000437003 CD163L1Q9NR16 1453 aa15.45■□□□□ 0.06
TMEM116-202ENST00000437003 ZMYM3Q14202 1370 aa15.45■□□□□ 0.06
TMEM116-202ENST00000437003 ALKQ9UM73 1620 aa15.45■□□□□ 0.06
TMEM116-202ENST00000437003 ADGRB2O60241 1585 aa15.45■□□□□ 0.06
TMEM116-202ENST00000437003 DIAPH1O60610 1272 aaKnown RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms