RNA–Protein interactions for RNA: ENST00000436769.5

COL6A2-206, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-206ENST00000436769 CDK19Q9BWU1 502 aa29.38■■■□□ 2.29
COL6A2-206ENST00000436769 NRAPQ86VF7 1730 aa29.37■■■□□ 2.29
COL6A2-206ENST00000436769 PAK3O75914 559 aaPredicted RBP29.34■■■□□ 2.29
COL6A2-206ENST00000436769 BTG4Q9NY30 223 aa29.34■■■□□ 2.29
COL6A2-206ENST00000436769 COL14A1Q05707 1796 aaKnown RBP29.34■■■□□ 2.29
COL6A2-206ENST00000436769 CCDC9Q9Y3X0 531 aaKnown RBP29.33■■■□□ 2.29
COL6A2-206ENST00000436769 TOPAZ1Q8N9V7 1692 aa29.31■■■□□ 2.28
COL6A2-206ENST00000436769 POLR3AO14802 1390 aaPredicted RBP29.3■■■□□ 2.28
COL6A2-206ENST00000436769 CCDC61Q9Y6R9 512 aa29.3■■■□□ 2.28
COL6A2-206ENST00000436769 BLMP54132 1417 aaPredicted RBP29.29■■■□□ 2.28
COL6A2-206ENST00000436769 PLEKHG3A1L390 1219 aa29.29■■■□□ 2.28
COL6A2-206ENST00000436769 NBPF8Q3BBV2 869 aa29.28■■■□□ 2.28
COL6A2-206ENST00000436769 ACEP12821 1306 aa29.27■■■□□ 2.28
COL6A2-206ENST00000436769 KRT27Q7Z3Y8 459 aa29.27■■■□□ 2.28
COL6A2-206ENST00000436769 FAM98CQ17RN3 349 aaKnown RBP29.24■■■□□ 2.27
COL6A2-206ENST00000436769 L3MBTL2Q969R5 705 aa29.24■■■□□ 2.27
COL6A2-206ENST00000436769 ZRANB1Q9UGI0 708 aa29.24■■■□□ 2.27
COL6A2-206ENST00000436769 SPATA31A5Q5VU36 1347 aa29.23■■■□□ 2.27
COL6A2-206ENST00000436769 SPATA31A7Q8IWB4 1347 aa29.23■■■□□ 2.27
COL6A2-206ENST00000436769 PHRF1Q9P1Y6 1649 aaKnown RBP29.23■■■□□ 2.27
COL6A2-206ENST00000436769 PRDM11Q9NQV5 511 aa29.22■■■□□ 2.27
COL6A2-206ENST00000436769 CENPJQ9HC77 1338 aaPredicted RBP29.21■■■□□ 2.27
COL6A2-206ENST00000436769 DEFB132Q7Z7B7 95 aa29.21■■■□□ 2.27
COL6A2-206ENST00000436769 KIAA0232Q92628 1395 aa29.21■■■□□ 2.27
COL6A2-206ENST00000436769 NUTM2GQ5VZR2 741 aa29.2■■■□□ 2.26
COL6A2-206ENST00000436769 SIN3AQ96ST3 1273 aa29.19■■■□□ 2.26
COL6A2-206ENST00000436769 CHRNA2Q15822 529 aa29.17■■■□□ 2.26
COL6A2-206ENST00000436769 CABP2Q9NPB3 220 aa29.17■■■□□ 2.26
COL6A2-206ENST00000436769 A0A0G2JS52 829 aa29.16■■■□□ 2.26
COL6A2-206ENST00000436769 ZC3H6P61129 1189 aaKnown RBP29.16■■■□□ 2.26
COL6A2-206ENST00000436769 SRPK2P78362 688 aaKnown RBP29.16■■■□□ 2.26
COL6A2-206ENST00000436769 MYT1Q01538 1121 aa29.16■■■□□ 2.26
COL6A2-206ENST00000436769 QRICH2Q9H0J4 1663 aa29.15■■■□□ 2.26
COL6A2-206ENST00000436769 PPIP5K1Q6PFW1 1433 aa29.15■■■□□ 2.26
COL6A2-206ENST00000436769 ABTB2Q8N961 1025 aa29.14■■■□□ 2.26
COL6A2-206ENST00000436769 THSD7AQ9UPZ6 1657 aa29.14■■■□□ 2.26
COL6A2-206ENST00000436769 SF3B2Q13435 895 aaKnown RBP29.13■■■□□ 2.25
COL6A2-206ENST00000436769 SPATA31A1Q5TZJ5 1347 aa29.13■■■□□ 2.25
COL6A2-206ENST00000436769 USP19O94966 1318 aa29.12■■■□□ 2.25
COL6A2-206ENST00000436769 TRPM1Q7Z4N2 1603 aa29.12■■■□□ 2.25
COL6A2-206ENST00000436769 NRKQ7Z2Y5 1582 aa29.11■■■□□ 2.25
COL6A2-206ENST00000436769 FAM182BQ5T319 152 aa29.09■■■□□ 2.25
COL6A2-206ENST00000436769 STRN4Q9NRL3 753 aa29.09■■■□□ 2.25
COL6A2-206ENST00000436769 CABP1Q9NZU7 370 aa29.09■■■□□ 2.25
COL6A2-206ENST00000436769 NEUROD1Q13562 356 aa29.08■■■□□ 2.25
COL6A2-206ENST00000436769 CPDO75976 1380 aa29.08■■■□□ 2.25
COL6A2-206ENST00000436769 BRD4O60885 1362 aaPredicted RBP29.07■■■□□ 2.24
COL6A2-206ENST00000436769 CAMTA1Q9Y6Y1 1673 aa29.07■■■□□ 2.24
COL6A2-206ENST00000436769 NLRP13Q86W25 1043 aa29.06■■■□□ 2.24
COL6A2-206ENST00000436769 LMO7Q8WWI1 1683 aa29.05■■■□□ 2.24
COL6A2-206ENST00000436769 GCP02774 474 aa29.05■■■□□ 2.24
COL6A2-206ENST00000436769 USP6P35125 1406 aa29.03■■■□□ 2.24
COL6A2-206ENST00000436769 SSH2Q76I76 1423 aa29.03■■■□□ 2.24
COL6A2-206ENST00000436769 BAG6P46379 1132 aa29.02■■■□□ 2.24
COL6A2-206ENST00000436769 EVA1CP58658 441 aa29.02■■■□□ 2.24
COL6A2-206ENST00000436769 EVC2Q86UK5 1308 aa29.01■■■□□ 2.23
COL6A2-206ENST00000436769 RGPD1P0DJD0 1748 aa29.01■■■□□ 2.23
COL6A2-206ENST00000436769 ROCK2O75116 1388 aaKnown RBP29.01■■■□□ 2.23
COL6A2-206ENST00000436769 LARP1Q6PKG0 1096 aaKnown RBP29■■■□□ 2.23
COL6A2-206ENST00000436769 BARGINQ6ZT62 677 aa29■■■□□ 2.23
COL6A2-206ENST00000436769 USP35Q9P2H5 1018 aa28.99■■■□□ 2.23
COL6A2-206ENST00000436769 NLRP6P59044 892 aa28.97■■■□□ 2.23
COL6A2-206ENST00000436769 EN1Q05925 392 aaPredicted RBP28.97■■■□□ 2.23
COL6A2-206ENST00000436769 TNS1Q9HBL0 1735 aaKnown RBP28.97■■■□□ 2.23
COL6A2-206ENST00000436769 SLIT3O75094 1523 aa28.95■■■□□ 2.23
COL6A2-206ENST00000436769 DISP2A7MBM2 1401 aa28.94■■■□□ 2.22
COL6A2-206ENST00000436769 PIK3C2AO00443 1686 aa28.94■■■□□ 2.22
COL6A2-206ENST00000436769 FAM196AQ6ZSG2 479 aa28.94■■■□□ 2.22
COL6A2-206ENST00000436769 TCP11L2Q8N4U5 519 aa28.94■■■□□ 2.22
COL6A2-206ENST00000436769 COL5A2P05997 1499 aaPredicted RBP28.93■■■□□ 2.22
COL6A2-206ENST00000436769 AKAP12Q02952 1782 aa28.91■■■□□ 2.22
COL6A2-206ENST00000436769 ZNF692Q9BU19 519 aaPredicted RBP28.91■■■□□ 2.22
COL6A2-206ENST00000436769 THRAP3Q9Y2W1 955 aaKnown RBP28.91■■■□□ 2.22
COL6A2-206ENST00000436769 AATKQ6ZMQ8 1374 aa28.9■■■□□ 2.22
COL6A2-206ENST00000436769 TRIM37O94972 964 aa28.9■■■□□ 2.22
COL6A2-206ENST00000436769 COL18A1P39060 1754 aa28.9■■■□□ 2.22
COL6A2-206ENST00000436769 TTC21BQ7Z4L5 1316 aa28.89■■■□□ 2.21
COL6A2-206ENST00000436769 CPSF1Q10570 1443 aaKnown RBP28.88■■■□□ 2.21
COL6A2-206ENST00000436769 PSDA5PKW4 1024 aaPredicted RBP28.88■■■□□ 2.21
COL6A2-206ENST00000436769 PDE3BQ13370 1112 aa28.88■■■□□ 2.21
COL6A2-206ENST00000436769 EZH2Q15910 746 aaKnown RBP28.87■■■□□ 2.21
COL6A2-206ENST00000436769 CAMKK2Q96RR4 588 aa28.87■■■□□ 2.21
COL6A2-206ENST00000436769 PARP4Q9UKK3 1724 aaKnown RBP28.86■■■□□ 2.21
COL6A2-206ENST00000436769 CRB1P82279 1406 aa28.86■■■□□ 2.21
COL6A2-206ENST00000436769 AXIN2Q9Y2T1 843 aa28.85■■■□□ 2.21
COL6A2-206ENST00000436769 SBNO2Q9Y2G9 1366 aa28.85■■■□□ 2.21
COL6A2-206ENST00000436769 ZBTB7CA1YPR0 619 aa28.84■■■□□ 2.21
COL6A2-206ENST00000436769 LRP5O75197 1615 aa28.83■■■□□ 2.21
COL6A2-206ENST00000436769 ARHGEF25Q86VW2 580 aa28.82■■■□□ 2.2
COL6A2-206ENST00000436769 CARD11Q9BXL7 1154 aa28.82■■■□□ 2.2
COL6A2-206ENST00000436769 TTC21AQ8NDW8 1320 aa28.82■■■□□ 2.2
COL6A2-206ENST00000436769 APBA3O96018 575 aa28.81■■■□□ 2.2
COL6A2-206ENST00000436769 KCNH5Q8NCM2 988 aa28.8■■■□□ 2.2
COL6A2-206ENST00000436769 KTN1Q86UP2 1357 aaKnown RBP28.79■■■□□ 2.2
COL6A2-206ENST00000436769 RGPD5Q99666 1765 aa28.79■■■□□ 2.2
COL6A2-206ENST00000436769 MON2Q7Z3U7 1717 aa28.78■■■□□ 2.2
COL6A2-206ENST00000436769 R3HDM1Q15032 1099 aaKnown RBP28.78■■■□□ 2.2
COL6A2-206ENST00000436769 PARD3Q8TEW0 1356 aa28.76■■■□□ 2.2
COL6A2-206ENST00000436769 WDR17Q8IZU2 1322 aa28.76■■■□□ 2.19
COL6A2-206ENST00000436769 TOM1L2Q6ZVM7 507 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms