RNA–Protein interactions for RNA: ENST00000436654.1

CTDSPL-205, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-205ENST00000436654 SIN3AQ96ST3 1273 aa12.85□□□□□ -0.35
CTDSPL-205ENST00000436654 PRDM11Q9NQV5 511 aa12.85□□□□□ -0.35
CTDSPL-205ENST00000436654 ACEP12821 1306 aa12.85□□□□□ -0.35
CTDSPL-205ENST00000436654 ONECUT3O60422 494 aaPredicted RBP12.84□□□□□ -0.35
CTDSPL-205ENST00000436654 SRPK2P78362 688 aaKnown RBP12.84□□□□□ -0.35
CTDSPL-205ENST00000436654 NEUROD1Q13562 356 aa12.84□□□□□ -0.35
CTDSPL-205ENST00000436654 NBPF8Q3BBV2 869 aa12.84□□□□□ -0.35
CTDSPL-205ENST00000436654 CCDC61Q9Y6R9 512 aa12.84□□□□□ -0.35
CTDSPL-205ENST00000436654 ABCA3Q99758 1704 aa12.84□□□□□ -0.35
CTDSPL-205ENST00000436654 CENPJQ9HC77 1338 aaPredicted RBP12.84□□□□□ -0.35
CTDSPL-205ENST00000436654 LRP5O75197 1615 aa12.84□□□□□ -0.35
CTDSPL-205ENST00000436654 CHRNA2Q15822 529 aa12.83□□□□□ -0.36
CTDSPL-205ENST00000436654 KRT27Q7Z3Y8 459 aa12.83□□□□□ -0.36
CTDSPL-205ENST00000436654 CABP2Q9NPB3 220 aa12.83□□□□□ -0.36
CTDSPL-205ENST00000436654 EP400Q96L91 3159 aa12.83□□□□□ -0.36
CTDSPL-205ENST00000436654 PLCH1Q4KWH8 1693 aa12.83□□□□□ -0.36
CTDSPL-205ENST00000436654 ALS2Q96Q42 1657 aa12.83□□□□□ -0.36
CTDSPL-205ENST00000436654 POLR3AO14802 1390 aaPredicted RBP12.82□□□□□ -0.36
CTDSPL-205ENST00000436654 KIAA0232Q92628 1395 aa12.82□□□□□ -0.36
CTDSPL-205ENST00000436654 BLMP54132 1417 aaPredicted RBP12.82□□□□□ -0.36
CTDSPL-205ENST00000436654 PLEKHG3A1L390 1219 aa12.82□□□□□ -0.36
CTDSPL-205ENST00000436654 ZC3H6P61129 1189 aaKnown RBP12.82□□□□□ -0.36
CTDSPL-205ENST00000436654 SF3B2Q13435 895 aaKnown RBP12.81□□□□□ -0.36
CTDSPL-205ENST00000436654 DEFB132Q7Z7B7 95 aa12.81□□□□□ -0.36
CTDSPL-205ENST00000436654 NWD2Q9ULI1 1742 aa12.8□□□□□ -0.36
CTDSPL-205ENST00000436654 ABTB2Q8N961 1025 aa12.8□□□□□ -0.36
CTDSPL-205ENST00000436654 STRN4Q9NRL3 753 aa12.8□□□□□ -0.36
CTDSPL-205ENST00000436654 SPATA31A5Q5VU36 1347 aa12.8□□□□□ -0.36
CTDSPL-205ENST00000436654 SPATA31A7Q8IWB4 1347 aa12.8□□□□□ -0.36
CTDSPL-205ENST00000436654 PPIP5K1Q6PFW1 1433 aa12.79□□□□□ -0.36
CTDSPL-205ENST00000436654 FAM182BQ5T319 152 aa12.79□□□□□ -0.36
CTDSPL-205ENST00000436654 KIAA1210Q9ULL0 1709 aa12.79□□□□□ -0.36
CTDSPL-205ENST00000436654 COL14A1Q05707 1796 aaKnown RBP12.79□□□□□ -0.36
CTDSPL-205ENST00000436654 CABP1Q9NZU7 370 aa12.78□□□□□ -0.36
CTDSPL-205ENST00000436654 ITSN1Q15811 1721 aa12.77□□□□□ -0.36
CTDSPL-205ENST00000436654 NRAPQ86VF7 1730 aa12.77□□□□□ -0.36
CTDSPL-205ENST00000436654 TOPAZ1Q8N9V7 1692 aa12.77□□□□□ -0.37
CTDSPL-205ENST00000436654 EVA1CP58658 441 aa12.76□□□□□ -0.37
CTDSPL-205ENST00000436654 USP35Q9P2H5 1018 aa12.76□□□□□ -0.37
CTDSPL-205ENST00000436654 SPATA31A1Q5TZJ5 1347 aa12.76□□□□□ -0.37
CTDSPL-205ENST00000436654 ROCK2O75116 1388 aaKnown RBP12.76□□□□□ -0.37
CTDSPL-205ENST00000436654 ZBTB7CA1YPR0 619 aa12.75□□□□□ -0.37
CTDSPL-205ENST00000436654 USP19O94966 1318 aa12.75□□□□□ -0.37
CTDSPL-205ENST00000436654 GCP02774 474 aa12.75□□□□□ -0.37
CTDSPL-205ENST00000436654 NLRP13Q86W25 1043 aa12.75□□□□□ -0.37
CTDSPL-205ENST00000436654 CRYBG1Q9Y4K1 1723 aa12.75□□□□□ -0.37
CTDSPL-205ENST00000436654 EVC2Q86UK5 1308 aa12.74□□□□□ -0.37
CTDSPL-205ENST00000436654 LARP1Q6PKG0 1096 aaKnown RBP12.74□□□□□ -0.37
CTDSPL-205ENST00000436654 BRWD3Q6RI45 1802 aa12.74□□□□□ -0.37
CTDSPL-205ENST00000436654 SSH2Q76I76 1423 aa12.73□□□□□ -0.37
CTDSPL-205ENST00000436654 BAG6P46379 1132 aa12.73□□□□□ -0.37
CTDSPL-205ENST00000436654 NLRP6P59044 892 aa12.73□□□□□ -0.37
CTDSPL-205ENST00000436654 PHRF1Q9P1Y6 1649 aaKnown RBP12.73□□□□□ -0.37
CTDSPL-205ENST00000436654 USP6P35125 1406 aa12.72□□□□□ -0.37
CTDSPL-205ENST00000436654 CPDO75976 1380 aa12.72□□□□□ -0.37
CTDSPL-205ENST00000436654 EN1Q05925 392 aaPredicted RBP12.72□□□□□ -0.37
CTDSPL-205ENST00000436654 NRKQ7Z2Y5 1582 aa12.72□□□□□ -0.37
CTDSPL-205ENST00000436654 QRICH2Q9H0J4 1663 aa12.71□□□□□ -0.37
CTDSPL-205ENST00000436654 CAMTA1Q9Y6Y1 1673 aa12.7□□□□□ -0.38
CTDSPL-205ENST00000436654 BRD4O60885 1362 aaPredicted RBP12.7□□□□□ -0.38
CTDSPL-205ENST00000436654 TRPM1Q7Z4N2 1603 aa12.7□□□□□ -0.38
CTDSPL-205ENST00000436654 THSD7AQ9UPZ6 1657 aa12.7□□□□□ -0.38
CTDSPL-205ENST00000436654 PSDA5PKW4 1024 aaPredicted RBP12.69□□□□□ -0.38
CTDSPL-205ENST00000436654 SOX12O15370 315 aa12.69□□□□□ -0.38
CTDSPL-205ENST00000436654 TRIM37O94972 964 aa12.69□□□□□ -0.38
CTDSPL-205ENST00000436654 PDE3BQ13370 1112 aa12.69□□□□□ -0.38
CTDSPL-205ENST00000436654 BARGINQ6ZT62 677 aa12.69□□□□□ -0.38
CTDSPL-205ENST00000436654 TCP11L2Q8N4U5 519 aa12.69□□□□□ -0.38
CTDSPL-205ENST00000436654 TTC21BQ7Z4L5 1316 aa12.68□□□□□ -0.38
CTDSPL-205ENST00000436654 FAM196AQ6ZSG2 479 aa12.68□□□□□ -0.38
CTDSPL-205ENST00000436654 CARD11Q9BXL7 1154 aa12.68□□□□□ -0.38
CTDSPL-205ENST00000436654 ZNF692Q9BU19 519 aaPredicted RBP12.67□□□□□ -0.38
CTDSPL-205ENST00000436654 TONSLQ96HA7 1378 aa12.67□□□□□ -0.38
CTDSPL-205ENST00000436654 COL5A2P05997 1499 aaPredicted RBP12.66□□□□□ -0.38
CTDSPL-205ENST00000436654 EZH2Q15910 746 aaKnown RBP12.66□□□□□ -0.38
CTDSPL-205ENST00000436654 LMO7Q8WWI1 1683 aa12.66□□□□□ -0.38
CTDSPL-205ENST00000436654 AATKQ6ZMQ8 1374 aa12.66□□□□□ -0.38
CTDSPL-205ENST00000436654 APBA3O96018 575 aa12.65□□□□□ -0.38
CTDSPL-205ENST00000436654 AXIN2Q9Y2T1 843 aa12.65□□□□□ -0.38
CTDSPL-205ENST00000436654 THRAP3Q9Y2W1 955 aaKnown RBP12.65□□□□□ -0.38
CTDSPL-205ENST00000436654 SLIT3O75094 1523 aa12.65□□□□□ -0.38
CTDSPL-205ENST00000436654 KTN1Q86UP2 1357 aaKnown RBP12.65□□□□□ -0.38
CTDSPL-205ENST00000436654 CRB1P82279 1406 aa12.64□□□□□ -0.39
CTDSPL-205ENST00000436654 R3HDM1Q15032 1099 aaKnown RBP12.64□□□□□ -0.39
CTDSPL-205ENST00000436654 TOM1L2Q6ZVM7 507 aa12.64□□□□□ -0.39
CTDSPL-205ENST00000436654 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.64□□□□□ -0.39
CTDSPL-205ENST00000436654 TMC1Q8TDI8 760 aa12.64□□□□□ -0.39
CTDSPL-205ENST00000436654 TTC21AQ8NDW8 1320 aa12.63□□□□□ -0.39
CTDSPL-205ENST00000436654 DISP2A7MBM2 1401 aa12.63□□□□□ -0.39
CTDSPL-205ENST00000436654 CPSF1Q10570 1443 aaKnown RBP12.63□□□□□ -0.39
CTDSPL-205ENST00000436654 ARHGEF25Q86VW2 580 aa12.63□□□□□ -0.39
CTDSPL-205ENST00000436654 CAMKK2Q96RR4 588 aa12.63□□□□□ -0.39
CTDSPL-205ENST00000436654 PIK3C2AO00443 1686 aa12.63□□□□□ -0.39
CTDSPL-205ENST00000436654 CSB-PGBD3P0DP91 1061 aa12.62□□□□□ -0.39
CTDSPL-205ENST00000436654 KCNH5Q8NCM2 988 aa12.62□□□□□ -0.39
CTDSPL-205ENST00000436654 SBNO2Q9Y2G9 1366 aa12.61□□□□□ -0.39
CTDSPL-205ENST00000436654 NME9Q86XW9 330 aa12.61□□□□□ -0.39
CTDSPL-205ENST00000436654 SLC12A5Q9H2X9 1139 aa12.61□□□□□ -0.39
CTDSPL-205ENST00000436654 RGPD1P0DJD0 1748 aa12.61□□□□□ -0.39
CTDSPL-205ENST00000436654 WDR17Q8IZU2 1322 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms