RNA–Protein interactions for RNA: ENST00000436493.2

SDHAP3-201, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene SDHAP3, Length 736 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP3-201ENST00000436493 QTRT2Q9H974 415 aaKnown RBP30.3■■■□□ 2.44
SDHAP3-201ENST00000436493 ALS2Q96Q42 1657 aa30.3■■■□□ 2.44
SDHAP3-201ENST00000436493 ATAD2Q6PL18 1390 aa30.28■■■□□ 2.44
SDHAP3-201ENST00000436493 MARF1Q9Y4F3 1742 aaKnown RBP30.27■■■□□ 2.44
SDHAP3-201ENST00000436493 ST20-MTHFSA0A0A6YYL1 179 aa30.27■■■□□ 2.44
SDHAP3-201ENST00000436493 SLC24A1O60721 1099 aa30.26■■■□□ 2.43
SDHAP3-201ENST00000436493 ABTB2Q8N961 1025 aa30.23■■■□□ 2.43
SDHAP3-201ENST00000436493 TRPC5Q9UL62 973 aaPredicted RBP30.23■■■□□ 2.43
SDHAP3-201ENST00000436493 BRD4O60885 1362 aaPredicted RBP30.23■■■□□ 2.43
SDHAP3-201ENST00000436493 RBM6P78332 1123 aaKnown RBP30.22■■■□□ 2.43
SDHAP3-201ENST00000436493 NUTM2GQ5VZR2 741 aa30.22■■■□□ 2.43
SDHAP3-201ENST00000436493 ZNF692Q9BU19 519 aaPredicted RBP30.22■■■□□ 2.43
SDHAP3-201ENST00000436493 USP47Q96K76 1375 aa30.22■■■□□ 2.43
SDHAP3-201ENST00000436493 ABCA3Q99758 1704 aa30.21■■■□□ 2.43
SDHAP3-201ENST00000436493 TESK2Q96S53 571 aa30.2■■■□□ 2.43
SDHAP3-201ENST00000436493 USP6P35125 1406 aa30.19■■■□□ 2.42
SDHAP3-201ENST00000436493 TMC1Q8TDI8 760 aa30.18■■■□□ 2.42
SDHAP3-201ENST00000436493 PUS7Q96PZ0 661 aaKnown RBP30.18■■■□□ 2.42
SDHAP3-201ENST00000436493 UNC5CLQ8IV45 518 aa30.17■■■□□ 2.42
SDHAP3-201ENST00000436493 BCL9LQ86UU0 1499 aa30.17■■■□□ 2.42
SDHAP3-201ENST00000436493 NLRP13Q86W25 1043 aa30.16■■■□□ 2.42
SDHAP3-201ENST00000436493 FAM83GA6ND36 823 aa30.15■■■□□ 2.42
SDHAP3-201ENST00000436493 SLIT2O94813 1529 aa30.15■■■□□ 2.42
SDHAP3-201ENST00000436493 ATRNO75882 1429 aa30.14■■■□□ 2.42
SDHAP3-201ENST00000436493 CDK12Q9NYV4 1490 aaPredicted RBP30.12■■■□□ 2.41
SDHAP3-201ENST00000436493 TMF1P82094 1093 aa30.12■■■□□ 2.41
SDHAP3-201ENST00000436493 PRDM11Q9NQV5 511 aa30.12■■■□□ 2.41
SDHAP3-201ENST00000436493 KTN1Q86UP2 1357 aaKnown RBP30.12■■■□□ 2.41
SDHAP3-201ENST00000436493 NLRP6P59044 892 aa30.11■■■□□ 2.41
SDHAP3-201ENST00000436493 CRYBG1Q9Y4K1 1723 aa30.1■■■□□ 2.41
SDHAP3-201ENST00000436493 HDGFL2Q7Z4V5 671 aaPredicted RBP30.1■■■□□ 2.41
SDHAP3-201ENST00000436493 SLC12A5Q9H2X9 1139 aa30.1■■■□□ 2.41
SDHAP3-201ENST00000436493 CPSF1Q10570 1443 aaKnown RBP30.1■■■□□ 2.41
SDHAP3-201ENST00000436493 SSH2Q76I76 1423 aa30.09■■■□□ 2.41
SDHAP3-201ENST00000436493 TTC21BQ7Z4L5 1316 aa30.09■■■□□ 2.41
SDHAP3-201ENST00000436493 TERF2IPQ9NYB0 399 aa30.09■■■□□ 2.41
SDHAP3-201ENST00000436493 AKAP12Q02952 1782 aa30.08■■■□□ 2.41
SDHAP3-201ENST00000436493 ZC3H6P61129 1189 aaKnown RBP30.08■■■□□ 2.41
SDHAP3-201ENST00000436493 GJD4Q96KN9 370 aaPredicted RBP30.08■■■□□ 2.41
SDHAP3-201ENST00000436493 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.08■■■□□ 2.41
SDHAP3-201ENST00000436493 USP19O94966 1318 aa30.07■■■□□ 2.4
SDHAP3-201ENST00000436493 TTC21AQ8NDW8 1320 aa30.07■■■□□ 2.4
SDHAP3-201ENST00000436493 BTG4Q9NY30 223 aa30.07■■■□□ 2.4
SDHAP3-201ENST00000436493 NWD2Q9ULI1 1742 aa30.07■■■□□ 2.4
SDHAP3-201ENST00000436493 PLCH1Q4KWH8 1693 aa30.07■■■□□ 2.4
SDHAP3-201ENST00000436493 PHRF1Q9P1Y6 1649 aaKnown RBP30.07■■■□□ 2.4
SDHAP3-201ENST00000436493 KIAA0232Q92628 1395 aa30.06■■■□□ 2.4
SDHAP3-201ENST00000436493 COL14A1Q05707 1796 aaKnown RBP30.06■■■□□ 2.4
SDHAP3-201ENST00000436493 CCDC9Q9Y3X0 531 aaKnown RBP30.06■■■□□ 2.4
SDHAP3-201ENST00000436493 VPS72Q15906 364 aa30.05■■■□□ 2.4
SDHAP3-201ENST00000436493 CDCA8Q53HL2 280 aa30.05■■■□□ 2.4
SDHAP3-201ENST00000436493 GCP02774 474 aa30.04■■■□□ 2.4
SDHAP3-201ENST00000436493 NINLQ9Y2I6 1382 aa30.03■■■□□ 2.4
SDHAP3-201ENST00000436493 CHRNA2Q15822 529 aa30.03■■■□□ 2.4
SDHAP3-201ENST00000436493 RGS12O14924 1447 aa30.03■■■□□ 2.4
SDHAP3-201ENST00000436493 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.02■■■□□ 2.4
SDHAP3-201ENST00000436493 CD163L1Q9NR16 1453 aa30■■■□□ 2.39
SDHAP3-201ENST00000436493 EIF4G2P78344 907 aaKnown RBP eCLIP30■■■□□ 2.39
SDHAP3-201ENST00000436493 MON2Q7Z3U7 1717 aa29.99■■■□□ 2.39
SDHAP3-201ENST00000436493 NRKQ7Z2Y5 1582 aa29.99■■■□□ 2.39
SDHAP3-201ENST00000436493 PIK3C2AO00443 1686 aa29.99■■■□□ 2.39
SDHAP3-201ENST00000436493 CPDO75976 1380 aa29.98■■■□□ 2.39
SDHAP3-201ENST00000436493 A0A1W2PP64 1363 aa29.97■■■□□ 2.39
SDHAP3-201ENST00000436493 ZBTB7CA1YPR0 619 aa29.96■■■□□ 2.39
SDHAP3-201ENST00000436493 EDC4Q6P2E9 1401 aaKnown RBP29.96■■■□□ 2.39
SDHAP3-201ENST00000436493 KCNH5Q8NCM2 988 aa29.95■■■□□ 2.39
SDHAP3-201ENST00000436493 EVA1CP58658 441 aa29.94■■■□□ 2.38
SDHAP3-201ENST00000436493 STRN4Q9NRL3 753 aa29.94■■■□□ 2.38
SDHAP3-201ENST00000436493 NRAPQ86VF7 1730 aa29.93■■■□□ 2.38
SDHAP3-201ENST00000436493 SLIT3O75094 1523 aa29.93■■■□□ 2.38
SDHAP3-201ENST00000436493 GLI3P10071 1580 aa29.93■■■□□ 2.38
SDHAP3-201ENST00000436493 HSPA5P11021 654 aaKnown RBP29.92■■■□□ 2.38
SDHAP3-201ENST00000436493 NME9Q86XW9 330 aa29.92■■■□□ 2.38
SDHAP3-201ENST00000436493 SOX12O15370 315 aa29.91■■■□□ 2.38
SDHAP3-201ENST00000436493 ZRANB1Q9UGI0 708 aa29.9■■■□□ 2.38
SDHAP3-201ENST00000436493 USP31Q70CQ4 1352 aa29.9■■■□□ 2.38
SDHAP3-201ENST00000436493 ANKRD36BQ8N2N9 1353 aa29.9■■■□□ 2.38
SDHAP3-201ENST00000436493 SPATA31A5Q5VU36 1347 aa29.88■■■□□ 2.37
SDHAP3-201ENST00000436493 SPATA31A7Q8IWB4 1347 aa29.88■■■□□ 2.37
SDHAP3-201ENST00000436493 A0A0G2JS52 829 aa29.87■■■□□ 2.37
SDHAP3-201ENST00000436493 MYT1Q01538 1121 aa29.87■■■□□ 2.37
SDHAP3-201ENST00000436493 SEPT12Q8IYM1 358 aa29.87■■■□□ 2.37
SDHAP3-201ENST00000436493 ONECUT3O60422 494 aaPredicted RBP29.86■■■□□ 2.37
SDHAP3-201ENST00000436493 AATKQ6ZMQ8 1374 aa29.86■■■□□ 2.37
SDHAP3-201ENST00000436493 CAMTA1Q9Y6Y1 1673 aa29.85■■■□□ 2.37
SDHAP3-201ENST00000436493 FAM98CQ17RN3 349 aaKnown RBP29.85■■■□□ 2.37
SDHAP3-201ENST00000436493 UPF1Q92900 1129 aaKnown RBP eCLIP29.85■■■□□ 2.37
SDHAP3-201ENST00000436493 POLR3GLQ9BT43 218 aa29.85■■■□□ 2.37
SDHAP3-201ENST00000436493 ARHGEF25Q86VW2 580 aa29.84■■■□□ 2.37
SDHAP3-201ENST00000436493 LMO7Q8WWI1 1683 aa29.82■■■□□ 2.36
SDHAP3-201ENST00000436493 SPATA31A1Q5TZJ5 1347 aa29.82■■■□□ 2.36
SDHAP3-201ENST00000436493 LARP1Q6PKG0 1096 aaKnown RBP29.8■■■□□ 2.36
SDHAP3-201ENST00000436493 COG3Q96JB2 828 aa29.8■■■□□ 2.36
SDHAP3-201ENST00000436493 USP35Q9P2H5 1018 aa29.79■■■□□ 2.36
SDHAP3-201ENST00000436493 USP54Q70EL1 1684 aa29.79■■■□□ 2.36
SDHAP3-201ENST00000436493 NFAT5O94916 1531 aa29.78■■■□□ 2.36
SDHAP3-201ENST00000436493 COL5A2P05997 1499 aaPredicted RBP29.77■■■□□ 2.36
SDHAP3-201ENST00000436493 OVOS2A0A0J9YW53 1432 aa29.76■■■□□ 2.35
SDHAP3-201ENST00000436493 OVOS2Q6IE36 1432 aa29.76■■■□□ 2.35
SDHAP3-201ENST00000436493 KRT27Q7Z3Y8 459 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms