RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 EIF3AQ14152 1382 aaKnown RBP15.65■□□□□ 0.1
HMGCL-204ENST00000436439 TONSLQ96HA7 1378 aa15.65■□□□□ 0.1
HMGCL-204ENST00000436439 COL14A1Q05707 1796 aaKnown RBP15.65■□□□□ 0.1
HMGCL-204ENST00000436439 VPS72Q15906 364 aa15.64■□□□□ 0.09
HMGCL-204ENST00000436439 GPRASP1Q5JY77 1395 aa15.64■□□□□ 0.09
HMGCL-204ENST00000436439 PHRF1Q9P1Y6 1649 aaKnown RBP15.63■□□□□ 0.09
HMGCL-204ENST00000436439 SEPT12Q8IYM1 358 aa15.62■□□□□ 0.09
HMGCL-204ENST00000436439 NBPF1Q3BBV0 1214 aa15.61■□□□□ 0.09
HMGCL-204ENST00000436439 NGDNQ8NEJ9 315 aaKnown RBP15.61■□□□□ 0.09
HMGCL-204ENST00000436439 NUDT16Q96DE0 195 aaKnown RBP15.61■□□□□ 0.09
HMGCL-204ENST00000436439 CCDC9Q9Y3X0 531 aaKnown RBP15.61■□□□□ 0.09
HMGCL-204ENST00000436439 ONECUT3O60422 494 aaPredicted RBP15.6■□□□□ 0.09
HMGCL-204ENST00000436439 CCDC125Q86Z20 511 aa15.6■□□□□ 0.09
HMGCL-204ENST00000436439 BTG4Q9NY30 223 aa15.6■□□□□ 0.09
HMGCL-204ENST00000436439 PAK3O75914 559 aaPredicted RBP15.59■□□□□ 0.09
HMGCL-204ENST00000436439 CDK19Q9BWU1 502 aa15.59■□□□□ 0.09
HMGCL-204ENST00000436439 BLMP54132 1417 aaPredicted RBP15.58■□□□□ 0.08
HMGCL-204ENST00000436439 QRICH2Q9H0J4 1663 aa15.58■□□□□ 0.08
HMGCL-204ENST00000436439 DEFB132Q7Z7B7 95 aa15.56■□□□□ 0.08
HMGCL-204ENST00000436439 THSD7AQ9UPZ6 1657 aa15.56■□□□□ 0.08
HMGCL-204ENST00000436439 POLR3AO14802 1390 aaPredicted RBP15.55■□□□□ 0.08
HMGCL-204ENST00000436439 ACEP12821 1306 aa15.55■□□□□ 0.08
HMGCL-204ENST00000436439 FAM98CQ17RN3 349 aaKnown RBP15.55■□□□□ 0.08
HMGCL-204ENST00000436439 KRT27Q7Z3Y8 459 aa15.55■□□□□ 0.08
HMGCL-204ENST00000436439 L3MBTL2Q969R5 705 aa15.55■□□□□ 0.08
HMGCL-204ENST00000436439 NUTM2GQ5VZR2 741 aa15.54■□□□□ 0.08
HMGCL-204ENST00000436439 ZRANB1Q9UGI0 708 aa15.54■□□□□ 0.08
HMGCL-204ENST00000436439 NRKQ7Z2Y5 1582 aa15.54■□□□□ 0.08
HMGCL-204ENST00000436439 KIAA0232Q92628 1395 aa15.54■□□□□ 0.08
HMGCL-204ENST00000436439 TRPM1Q7Z4N2 1603 aa15.53■□□□□ 0.08
HMGCL-204ENST00000436439 A0A0G2JS52 829 aa15.53■□□□□ 0.08
HMGCL-204ENST00000436439 MYT1Q01538 1121 aa15.53■□□□□ 0.08
HMGCL-204ENST00000436439 SPATA31A5Q5VU36 1347 aa15.53■□□□□ 0.08
HMGCL-204ENST00000436439 SPATA31A7Q8IWB4 1347 aa15.53■□□□□ 0.08
HMGCL-204ENST00000436439 CHRNA2Q15822 529 aa15.52■□□□□ 0.08
HMGCL-204ENST00000436439 NBPF8Q3BBV2 869 aa15.52■□□□□ 0.08
HMGCL-204ENST00000436439 PRDM11Q9NQV5 511 aa15.52■□□□□ 0.08
HMGCL-204ENST00000436439 CCDC61Q9Y6R9 512 aa15.52■□□□□ 0.08
HMGCL-204ENST00000436439 PLEKHG3A1L390 1219 aa15.51■□□□□ 0.07
HMGCL-204ENST00000436439 RGPD1P0DJD0 1748 aa15.51■□□□□ 0.07
HMGCL-204ENST00000436439 CENPJQ9HC77 1338 aaPredicted RBP15.51■□□□□ 0.07
HMGCL-204ENST00000436439 LMO7Q8WWI1 1683 aa15.51■□□□□ 0.07
HMGCL-204ENST00000436439 ZC3H6P61129 1189 aaKnown RBP15.5■□□□□ 0.07
HMGCL-204ENST00000436439 FAM182BQ5T319 152 aa15.5■□□□□ 0.07
HMGCL-204ENST00000436439 TNS1Q9HBL0 1735 aaKnown RBP15.5■□□□□ 0.07
HMGCL-204ENST00000436439 PPIP5K1Q6PFW1 1433 aa15.5■□□□□ 0.07
HMGCL-204ENST00000436439 CABP2Q9NPB3 220 aa15.49■□□□□ 0.07
HMGCL-204ENST00000436439 SRCAPQ6ZRS2 3230 aa15.49■□□□□ 0.07
HMGCL-204ENST00000436439 SRPK2P78362 688 aaKnown RBP15.49■□□□□ 0.07
HMGCL-204ENST00000436439 SF3B2Q13435 895 aaKnown RBP15.49■□□□□ 0.07
HMGCL-204ENST00000436439 SPATA31A1Q5TZJ5 1347 aa15.48■□□□□ 0.07
HMGCL-204ENST00000436439 CAMTA1Q9Y6Y1 1673 aa15.48■□□□□ 0.07
HMGCL-204ENST00000436439 STRN4Q9NRL3 753 aa15.48■□□□□ 0.07
HMGCL-204ENST00000436439 ABTB2Q8N961 1025 aa15.47■□□□□ 0.07
HMGCL-204ENST00000436439 USP19O94966 1318 aa15.46■□□□□ 0.07
HMGCL-204ENST00000436439 PIK3C2AO00443 1686 aa15.45■□□□□ 0.06
HMGCL-204ENST00000436439 SSH2Q76I76 1423 aa15.45■□□□□ 0.06
HMGCL-204ENST00000436439 AKAP12Q02952 1782 aa15.45■□□□□ 0.06
HMGCL-204ENST00000436439 USP6P35125 1406 aa15.44■□□□□ 0.06
HMGCL-204ENST00000436439 CPDO75976 1380 aa15.43■□□□□ 0.06
HMGCL-204ENST00000436439 BAG6P46379 1132 aa15.43■□□□□ 0.06
HMGCL-204ENST00000436439 CABP1Q9NZU7 370 aa15.43■□□□□ 0.06
HMGCL-204ENST00000436439 USP35Q9P2H5 1018 aa15.43■□□□□ 0.06
HMGCL-204ENST00000436439 GCP02774 474 aa15.42■□□□□ 0.06
HMGCL-204ENST00000436439 EN1Q05925 392 aaPredicted RBP15.42■□□□□ 0.06
HMGCL-204ENST00000436439 LARP1Q6PKG0 1096 aaKnown RBP15.42■□□□□ 0.06
HMGCL-204ENST00000436439 SLIT3O75094 1523 aa15.42■□□□□ 0.06
HMGCL-204ENST00000436439 COL18A1P39060 1754 aa15.41■□□□□ 0.06
HMGCL-204ENST00000436439 NLRP13Q86W25 1043 aa15.41■□□□□ 0.06
HMGCL-204ENST00000436439 LRP5O75197 1615 aa15.41■□□□□ 0.06
HMGCL-204ENST00000436439 PARP4Q9UKK3 1724 aaKnown RBP15.41■□□□□ 0.06
HMGCL-204ENST00000436439 RGPD5Q99666 1765 aa15.41■□□□□ 0.06
HMGCL-204ENST00000436439 COL5A2P05997 1499 aaPredicted RBP15.41■□□□□ 0.06
HMGCL-204ENST00000436439 EVA1CP58658 441 aa15.4■□□□□ 0.06
HMGCL-204ENST00000436439 BRD4O60885 1362 aaPredicted RBP15.4■□□□□ 0.06
HMGCL-204ENST00000436439 ROCK2O75116 1388 aaKnown RBP15.4■□□□□ 0.06
HMGCL-204ENST00000436439 DISP2A7MBM2 1401 aa15.4■□□□□ 0.06
HMGCL-204ENST00000436439 PSDA5PKW4 1024 aaPredicted RBP15.39■□□□□ 0.05
HMGCL-204ENST00000436439 BARGINQ6ZT62 677 aa15.39■□□□□ 0.05
HMGCL-204ENST00000436439 WNK3Q9BYP7 1800 aa15.39■□□□□ 0.05
HMGCL-204ENST00000436439 EVC2Q86UK5 1308 aa15.38■□□□□ 0.05
HMGCL-204ENST00000436439 TRIM37O94972 964 aa15.37■□□□□ 0.05
HMGCL-204ENST00000436439 NLRP6P59044 892 aa15.37■□□□□ 0.05
HMGCL-204ENST00000436439 RREB1Q92766 1687 aa15.37■□□□□ 0.05
HMGCL-204ENST00000436439 MON2Q7Z3U7 1717 aa15.37■□□□□ 0.05
HMGCL-204ENST00000436439 ZBTB7CA1YPR0 619 aa15.36■□□□□ 0.05
HMGCL-204ENST00000436439 EZH2Q15910 746 aaKnown RBP15.36■□□□□ 0.05
HMGCL-204ENST00000436439 TCP11L2Q8N4U5 519 aa15.36■□□□□ 0.05
HMGCL-204ENST00000436439 LRRC37A3O60309 1634 aa15.36■□□□□ 0.05
HMGCL-204ENST00000436439 ZNF316A6NFI3 1004 aaPredicted RBP15.36■□□□□ 0.05
HMGCL-204ENST00000436439 FAM196AQ6ZSG2 479 aa15.36■□□□□ 0.05
HMGCL-204ENST00000436439 SBF2Q86WG5 1849 aa15.35■□□□□ 0.05
HMGCL-204ENST00000436439 NUP188Q5SRE5 1749 aa15.35■□□□□ 0.05
HMGCL-204ENST00000436439 PEAK1Q9H792 1746 aa15.35■□□□□ 0.05
HMGCL-204ENST00000436439 CRB1P82279 1406 aa15.35■□□□□ 0.05
HMGCL-204ENST00000436439 AATKQ6ZMQ8 1374 aa15.34■□□□□ 0.05
HMGCL-204ENST00000436439 TTC21BQ7Z4L5 1316 aa15.34■□□□□ 0.05
HMGCL-204ENST00000436439 CAMKK2Q96RR4 588 aa15.34■□□□□ 0.05
HMGCL-204ENST00000436439 THRAP3Q9Y2W1 955 aaKnown RBP15.34■□□□□ 0.05
HMGCL-204ENST00000436439 CPSF1Q10570 1443 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms