RNA–Protein interactions for RNA: ENST00000436140.2

LINC01516-201, Transcript of long intergenic non-protein coding RNA 1516, humanhuman

TSL 5 BASIC

Gene LINC01516, Length 2,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01516-201ENST00000436140 TTC21BQ7Z4L5 1316 aa14.31□□□□□ -0.12
LINC01516-201ENST00000436140 HSP90AB2PQ58FF8 381 aa14.31□□□□□ -0.12
LINC01516-201ENST00000436140 C20orf194Q5TEA3 1177 aa14.31□□□□□ -0.12
LINC01516-201ENST00000436140 WWC1Q8IX03 1113 aa14.31□□□□□ -0.12
LINC01516-201ENST00000436140 SMG6Q86US8 1419 aaKnown RBP14.3□□□□□ -0.12
LINC01516-201ENST00000436140 ABTB2Q8N961 1025 aa14.3□□□□□ -0.12
LINC01516-201ENST00000436140 BCAR3O75815 825 aa14.3□□□□□ -0.12
LINC01516-201ENST00000436140 PRKAR2BP31323 418 aa14.3□□□□□ -0.12
LINC01516-201ENST00000436140 TSR2Q969E8 191 aaKnown RBP14.3□□□□□ -0.12
LINC01516-201ENST00000436140 DUSP27Q5VZP5 1158 aa14.29□□□□□ -0.12
LINC01516-201ENST00000436140 MYO3AQ8NEV4 1616 aa14.29□□□□□ -0.12
LINC01516-201ENST00000436140 PHACTR3Q96KR7 559 aa14.29□□□□□ -0.12
LINC01516-201ENST00000436140 ZNF692Q9BU19 519 aaPredicted RBP14.29□□□□□ -0.12
LINC01516-201ENST00000436140 MAPK8IP3Q9UPT6 1336 aa14.29□□□□□ -0.12
LINC01516-201ENST00000436140 PSME1Q06323 249 aa14.28□□□□□ -0.12
LINC01516-201ENST00000436140 AEBP1Q8IUX7 1158 aa14.28□□□□□ -0.12
LINC01516-201ENST00000436140 FRAT1Q92837 279 aaPredicted RBP14.28□□□□□ -0.12
LINC01516-201ENST00000436140 POLR3AO14802 1390 aaPredicted RBP14.28□□□□□ -0.12
LINC01516-201ENST00000436140 RIPK4P57078 832 aa14.28□□□□□ -0.12
LINC01516-201ENST00000436140 KDM4FA0A1W2PPD8 638 aa14.27□□□□□ -0.12
LINC01516-201ENST00000436140 ELL2O00472 640 aaPredicted RBP14.27□□□□□ -0.12
LINC01516-201ENST00000436140 SIRT1Q96EB6 747 aa14.27□□□□□ -0.12
LINC01516-201ENST00000436140 CCDC136Q96JN2 1154 aa14.27□□□□□ -0.12
LINC01516-201ENST00000436140 RRP1P56182 461 aaKnown RBP14.27□□□□□ -0.13
LINC01516-201ENST00000436140 DCTN1Q14203 1278 aa14.27□□□□□ -0.13
LINC01516-201ENST00000436140 TCERG1O14776 1098 aaKnown RBP14.26□□□□□ -0.13
LINC01516-201ENST00000436140 SLFN5Q08AF3 891 aa14.26□□□□□ -0.13
LINC01516-201ENST00000436140 PDE3BQ13370 1112 aa14.26□□□□□ -0.13
LINC01516-201ENST00000436140 FAM135BQ49AJ0 1406 aa14.26□□□□□ -0.13
LINC01516-201ENST00000436140 AMPHP49418 695 aa14.25□□□□□ -0.13
LINC01516-201ENST00000436140 SKAP1Q86WV1 359 aa14.25□□□□□ -0.13
LINC01516-201ENST00000436140 PHF8Q9UPP1 1060 aa14.25□□□□□ -0.13
LINC01516-201ENST00000436140 CPS1P31327 1500 aa14.25□□□□□ -0.13
LINC01516-201ENST00000436140 BLMP54132 1417 aaPredicted RBP14.25□□□□□ -0.13
LINC01516-201ENST00000436140 FAM83GA6ND36 823 aa14.25□□□□□ -0.13
LINC01516-201ENST00000436140 SULT6B1Q6IMI4 303 aa14.25□□□□□ -0.13
LINC01516-201ENST00000436140 PPP4R2Q9NY27 417 aa14.25□□□□□ -0.13
LINC01516-201ENST00000436140 NINLQ9Y2I6 1382 aa14.24□□□□□ -0.13
LINC01516-201ENST00000436140 PLEKHG3A1L390 1219 aa14.24□□□□□ -0.13
LINC01516-201ENST00000436140 CEP170BQ9Y4F5 1589 aaPredicted RBP14.24□□□□□ -0.13
LINC01516-201ENST00000436140 TMPOP42166 694 aaKnown RBP14.24□□□□□ -0.13
LINC01516-201ENST00000436140 CLUAP1Q96AJ1 413 aa14.24□□□□□ -0.13
LINC01516-201ENST00000436140 ARHGAP23Q9P227 1491 aa14.23□□□□□ -0.13
LINC01516-201ENST00000436140 NEFMP07197 916 aa14.23□□□□□ -0.13
LINC01516-201ENST00000436140 CANXP27824 592 aaKnown RBP14.23□□□□□ -0.13
LINC01516-201ENST00000436140 CRBNQ96SW2 442 aa14.23□□□□□ -0.13
LINC01516-201ENST00000436140 USHBP1Q8N6Y0 703 aa14.22□□□□□ -0.13
LINC01516-201ENST00000436140 ATP7BP35670 1465 aa14.22□□□□□ -0.13
LINC01516-201ENST00000436140 CPSF1Q10570 1443 aaKnown RBP14.21□□□□□ -0.13
LINC01516-201ENST00000436140 MED14O60244 1454 aa14.21□□□□□ -0.13
LINC01516-201ENST00000436140 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.21□□□□□ -0.13
LINC01516-201ENST00000436140 TNNQ9UQP3 1299 aa14.21□□□□□ -0.13
LINC01516-201ENST00000436140 NSD2O96028 1365 aa14.21□□□□□ -0.13
LINC01516-201ENST00000436140 TECPR2O15040 1411 aa14.21□□□□□ -0.13
LINC01516-201ENST00000436140 SLIT1O75093 1534 aa14.21□□□□□ -0.14
LINC01516-201ENST00000436140 NPHP4O75161 1426 aaPredicted RBP14.21□□□□□ -0.14
LINC01516-201ENST00000436140 ZNF521Q96K83 1311 aa14.21□□□□□ -0.14
LINC01516-201ENST00000436140 DLC1Q96QB1 1528 aa14.2□□□□□ -0.14
LINC01516-201ENST00000436140 EDC4Q6P2E9 1401 aaKnown RBP14.2□□□□□ -0.14
LINC01516-201ENST00000436140 EIF4A2Q14240 407 aaKnown RBP14.2□□□□□ -0.14
LINC01516-201ENST00000436140 MAP3K19Q56UN5 1328 aa14.2□□□□□ -0.14
LINC01516-201ENST00000436140 E9PSI1 815 aa14.2□□□□□ -0.14
LINC01516-201ENST00000436140 IL13P35225 146 aa14.2□□□□□ -0.14
LINC01516-201ENST00000436140 PLEKHF1Q96S99 279 aa14.2□□□□□ -0.14
LINC01516-201ENST00000436140 SETD1AO15047 1707 aaKnown RBP14.2□□□□□ -0.14
LINC01516-201ENST00000436140 CABLES1Q8TDN4 633 aa14.19□□□□□ -0.14
LINC01516-201ENST00000436140 NKTRP30414 1462 aaKnown RBP14.19□□□□□ -0.14
LINC01516-201ENST00000436140 TRIM35Q9UPQ4 493 aa14.19□□□□□ -0.14
LINC01516-201ENST00000436140 ZC3H6P61129 1189 aaKnown RBP14.18□□□□□ -0.14
LINC01516-201ENST00000436140 MIS18AQ9NYP9 233 aa14.18□□□□□ -0.14
LINC01516-201ENST00000436140 ATF3P18847 181 aa14.18□□□□□ -0.14
LINC01516-201ENST00000436140 EXOSC9Q06265 439 aaKnown RBP14.18□□□□□ -0.14
LINC01516-201ENST00000436140 PANK1Q8TE04 598 aa14.18□□□□□ -0.14
LINC01516-201ENST00000436140 BCL11AQ9H165 835 aa14.18□□□□□ -0.14
LINC01516-201ENST00000436140 SETD1BQ9UPS6 1966 aaKnown RBP14.18□□□□□ -0.14
LINC01516-201ENST00000436140 RSPH6AQ9H0K4 717 aa14.17□□□□□ -0.14
LINC01516-201ENST00000436140 USP6P35125 1406 aa14.17□□□□□ -0.14
LINC01516-201ENST00000436140 MCM10Q7L590 875 aa14.16□□□□□ -0.14
LINC01516-201ENST00000436140 FCHSD2O94868 740 aa14.16□□□□□ -0.14
LINC01516-201ENST00000436140 TSHZ2Q9NRE2 1034 aa14.16□□□□□ -0.14
LINC01516-201ENST00000436140 COG6Q9Y2V7 657 aa14.15□□□□□ -0.14
LINC01516-201ENST00000436140 ZNF335Q9H4Z2 1342 aaPredicted RBP14.15□□□□□ -0.15
LINC01516-201ENST00000436140 KRT28Q7Z3Y7 464 aa14.14□□□□□ -0.15
LINC01516-201ENST00000436140 TMEM94Q12767 1356 aa14.14□□□□□ -0.15
LINC01516-201ENST00000436140 C19orf44Q9H6X5 657 aa14.13□□□□□ -0.15
LINC01516-201ENST00000436140 ADAMTSL3P82987 1691 aa14.13□□□□□ -0.15
LINC01516-201ENST00000436140 KRT24Q2M2I5 525 aa14.13□□□□□ -0.15
LINC01516-201ENST00000436140 LRRC59Q96AG4 307 aaKnown RBP14.13□□□□□ -0.15
LINC01516-201ENST00000436140 EYA1Q99502 592 aa14.13□□□□□ -0.15
LINC01516-201ENST00000436140 RNF123Q5XPI4 1314 aa14.12□□□□□ -0.15
LINC01516-201ENST00000436140 FANCIQ9NVI1 1328 aa14.11□□□□□ -0.15
LINC01516-201ENST00000436140 TRMT2AQ8IZ69 625 aaKnown RBP14.11□□□□□ -0.15
LINC01516-201ENST00000436140 TSPYL6Q8N831 410 aa14.1□□□□□ -0.15
LINC01516-201ENST00000436140 MYH16Q9H6N6 1097 aa14.1□□□□□ -0.15
LINC01516-201ENST00000436140 PTCH1Q13635 1447 aa14.1□□□□□ -0.15
LINC01516-201ENST00000436140 CHRNA2Q15822 529 aa14.1□□□□□ -0.15
LINC01516-201ENST00000436140 NFE2L2Q16236 605 aa14.1□□□□□ -0.15
LINC01516-201ENST00000436140 WDR63Q8IWG1 891 aa14.1□□□□□ -0.15
LINC01516-201ENST00000436140 SMC4Q9NTJ3 1288 aa14.1□□□□□ -0.15
LINC01516-201ENST00000436140 DIP2AQ14689 1571 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms