RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 ITSN1Q15811 1721 aa21.5■■□□□ 1.03
RPUSD3-208ENST00000433972 KIAA1210Q9ULL0 1709 aa21.5■■□□□ 1.03
RPUSD3-208ENST00000433972 CDK19Q9BWU1 502 aa21.5■■□□□ 1.03
RPUSD3-208ENST00000433972 A0A0G2JS52 829 aa21.49■■□□□ 1.03
RPUSD3-208ENST00000433972 MYT1Q01538 1121 aa21.49■■□□□ 1.03
RPUSD3-208ENST00000433972 KRT27Q7Z3Y8 459 aa21.49■■□□□ 1.03
RPUSD3-208ENST00000433972 CCDC61Q9Y6R9 512 aa21.49■■□□□ 1.03
RPUSD3-208ENST00000433972 COL14A1Q05707 1796 aaKnown RBP21.48■■□□□ 1.03
RPUSD3-208ENST00000433972 PRDM11Q9NQV5 511 aa21.48■■□□□ 1.03
RPUSD3-208ENST00000433972 POLR3AO14802 1390 aaPredicted RBP21.46■■□□□ 1.03
RPUSD3-208ENST00000433972 PLEKHG3A1L390 1219 aa21.44■■□□□ 1.02
RPUSD3-208ENST00000433972 FAM98CQ17RN3 349 aaKnown RBP21.44■■□□□ 1.02
RPUSD3-208ENST00000433972 ACEP12821 1306 aa21.43■■□□□ 1.02
RPUSD3-208ENST00000433972 CENPJQ9HC77 1338 aaPredicted RBP21.43■■□□□ 1.02
RPUSD3-208ENST00000433972 SRPK2P78362 688 aaKnown RBP21.42■■□□□ 1.02
RPUSD3-208ENST00000433972 TRIM26Q12899 539 aaPredicted RBP21.42■■□□□ 1.02
RPUSD3-208ENST00000433972 NBPF8Q3BBV2 869 aa21.42■■□□□ 1.02
RPUSD3-208ENST00000433972 SPATA31A5Q5VU36 1347 aa21.42■■□□□ 1.02
RPUSD3-208ENST00000433972 NRAPQ86VF7 1730 aa21.42■■□□□ 1.02
RPUSD3-208ENST00000433972 SPATA31A7Q8IWB4 1347 aa21.42■■□□□ 1.02
RPUSD3-208ENST00000433972 NBPF1Q3BBV0 1214 aa21.41■■□□□ 1.02
RPUSD3-208ENST00000433972 BRD4O60885 1362 aaPredicted RBP21.4■■□□□ 1.02
RPUSD3-208ENST00000433972 KIAA0232Q92628 1395 aa21.4■■□□□ 1.02
RPUSD3-208ENST00000433972 BAG6P46379 1132 aa21.39■■□□□ 1.01
RPUSD3-208ENST00000433972 TOPAZ1Q8N9V7 1692 aa21.38■■□□□ 1.01
RPUSD3-208ENST00000433972 ABTB2Q8N961 1025 aa21.38■■□□□ 1.01
RPUSD3-208ENST00000433972 SRCAPQ6ZRS2 3230 aa21.38■■□□□ 1.01
RPUSD3-208ENST00000433972 CRYBG1Q9Y4K1 1723 aa21.38■■□□□ 1.01
RPUSD3-208ENST00000433972 BRWD3Q6RI45 1802 aa21.37■■□□□ 1.01
RPUSD3-208ENST00000433972 PPIP5K1Q6PFW1 1433 aa21.37■■□□□ 1.01
RPUSD3-208ENST00000433972 ZC3H6P61129 1189 aaKnown RBP21.36■■□□□ 1.01
RPUSD3-208ENST00000433972 DEFB132Q7Z7B7 95 aa21.36■■□□□ 1.01
RPUSD3-208ENST00000433972 EVA1CP58658 441 aa21.35■■□□□ 1.01
RPUSD3-208ENST00000433972 NLRP13Q86W25 1043 aa21.35■■□□□ 1.01
RPUSD3-208ENST00000433972 SPATA31A1Q5TZJ5 1347 aa21.34■■□□□ 1.01
RPUSD3-208ENST00000433972 PHRF1Q9P1Y6 1649 aaKnown RBP21.34■■□□□ 1.01
RPUSD3-208ENST00000433972 CHRNA2Q15822 529 aa21.34■■□□□ 1.01
RPUSD3-208ENST00000433972 NUTM2GQ5VZR2 741 aa21.34■■□□□ 1.01
RPUSD3-208ENST00000433972 L3MBTL2Q969R5 705 aa21.34■■□□□ 1.01
RPUSD3-208ENST00000433972 STRN4Q9NRL3 753 aa21.34■■□□□ 1.01
RPUSD3-208ENST00000433972 CPDO75976 1380 aa21.33■■□□□ 1
RPUSD3-208ENST00000433972 USP19O94966 1318 aa21.32■■□□□ 1
RPUSD3-208ENST00000433972 EVC2Q86UK5 1308 aa21.32■■□□□ 1
RPUSD3-208ENST00000433972 CABP2Q9NPB3 220 aa21.32■■□□□ 1
RPUSD3-208ENST00000433972 THSD7AQ9UPZ6 1657 aa21.3■■□□□ 1
RPUSD3-208ENST00000433972 SSH2Q76I76 1423 aa21.29■■□□□ 1
RPUSD3-208ENST00000433972 NRKQ7Z2Y5 1582 aa21.29■■□□□ 1
RPUSD3-208ENST00000433972 ROCK2O75116 1388 aaKnown RBP21.29■■□□□ 1
RPUSD3-208ENST00000433972 GCP02774 474 aa21.29■■□□□ 1
RPUSD3-208ENST00000433972 BARGINQ6ZT62 677 aa21.29■■□□□ 1
RPUSD3-208ENST00000433972 QRICH2Q9H0J4 1663 aa21.28■■□□□ 1
RPUSD3-208ENST00000433972 FAM196AQ6ZSG2 479 aa21.28■■□□□ 1
RPUSD3-208ENST00000433972 THRAP3Q9Y2W1 955 aaKnown RBP21.28■■□□□ 1
RPUSD3-208ENST00000433972 CABP1Q9NZU7 370 aa21.27■■□□□ 1
RPUSD3-208ENST00000433972 USP6P35125 1406 aa21.27■■□□□ 1
RPUSD3-208ENST00000433972 PDE3BQ13370 1112 aa21.26■□□□□ 0.99
RPUSD3-208ENST00000433972 USP35Q9P2H5 1018 aa21.26■□□□□ 0.99
RPUSD3-208ENST00000433972 DISP2A7MBM2 1401 aa21.26■□□□□ 0.99
RPUSD3-208ENST00000433972 RGPD1P0DJD0 1748 aa21.25■□□□□ 0.99
RPUSD3-208ENST00000433972 NEUROD1Q13562 356 aa21.25■□□□□ 0.99
RPUSD3-208ENST00000433972 TCP11L2Q8N4U5 519 aa21.25■□□□□ 0.99
RPUSD3-208ENST00000433972 ZNF692Q9BU19 519 aaPredicted RBP21.25■□□□□ 0.99
RPUSD3-208ENST00000433972 C11orf95C9JLR9 678 aaPredicted RBP21.24■□□□□ 0.99
RPUSD3-208ENST00000433972 NLRP6P59044 892 aa21.24■□□□□ 0.99
RPUSD3-208ENST00000433972 SIN3AQ96ST3 1273 aa21.24■□□□□ 0.99
RPUSD3-208ENST00000433972 TRPM1Q7Z4N2 1603 aa21.23■□□□□ 0.99
RPUSD3-208ENST00000433972 FAM182BQ5T319 152 aa21.23■□□□□ 0.99
RPUSD3-208ENST00000433972 LARP1Q6PKG0 1096 aaKnown RBP21.23■□□□□ 0.99
RPUSD3-208ENST00000433972 CAMTA1Q9Y6Y1 1673 aa21.22■□□□□ 0.99
RPUSD3-208ENST00000433972 EN1Q05925 392 aaPredicted RBP21.22■□□□□ 0.99
RPUSD3-208ENST00000433972 PARD3Q8TEW0 1356 aa21.22■□□□□ 0.99
RPUSD3-208ENST00000433972 LMO7Q8WWI1 1683 aa21.21■□□□□ 0.99
RPUSD3-208ENST00000433972 COL5A2P05997 1499 aaPredicted RBP21.2■□□□□ 0.98
RPUSD3-208ENST00000433972 AATKQ6ZMQ8 1374 aa21.2■□□□□ 0.98
RPUSD3-208ENST00000433972 KCNH5Q8NCM2 988 aa21.19■□□□□ 0.98
RPUSD3-208ENST00000433972 CRB1P82279 1406 aa21.19■□□□□ 0.98
RPUSD3-208ENST00000433972 SLIT3O75094 1523 aa21.19■□□□□ 0.98
RPUSD3-208ENST00000433972 TRIM37O94972 964 aa21.18■□□□□ 0.98
RPUSD3-208ENST00000433972 TTC21AQ8NDW8 1320 aa21.18■□□□□ 0.98
RPUSD3-208ENST00000433972 ZBTB7CA1YPR0 619 aa21.17■□□□□ 0.98
RPUSD3-208ENST00000433972 SBNO2Q9Y2G9 1366 aa21.16■□□□□ 0.98
RPUSD3-208ENST00000433972 APBA3O96018 575 aa21.16■□□□□ 0.98
RPUSD3-208ENST00000433972 TTC21BQ7Z4L5 1316 aa21.15■□□□□ 0.98
RPUSD3-208ENST00000433972 PSDA5PKW4 1024 aaPredicted RBP21.15■□□□□ 0.98
RPUSD3-208ENST00000433972 LRP5O75197 1615 aa21.15■□□□□ 0.98
RPUSD3-208ENST00000433972 EZH2Q15910 746 aaKnown RBP21.14■□□□□ 0.97
RPUSD3-208ENST00000433972 TNS1Q9HBL0 1735 aaKnown RBP21.13■□□□□ 0.97
RPUSD3-208ENST00000433972 TOM1L2Q6ZVM7 507 aa21.13■□□□□ 0.97
RPUSD3-208ENST00000433972 CAMKK2Q96RR4 588 aa21.13■□□□□ 0.97
RPUSD3-208ENST00000433972 CARD11Q9BXL7 1154 aa21.13■□□□□ 0.97
RPUSD3-208ENST00000433972 KTN1Q86UP2 1357 aaKnown RBP21.12■□□□□ 0.97
RPUSD3-208ENST00000433972 TONSLQ96HA7 1378 aa21.12■□□□□ 0.97
RPUSD3-208ENST00000433972 CDCA7Q9BWT1 371 aaPredicted RBP21.12■□□□□ 0.97
RPUSD3-208ENST00000433972 CPSF1Q10570 1443 aaKnown RBP21.12■□□□□ 0.97
RPUSD3-208ENST00000433972 WDR17Q8IZU2 1322 aa21.11■□□□□ 0.97
RPUSD3-208ENST00000433972 R3HDM1Q15032 1099 aaKnown RBP21.11■□□□□ 0.97
RPUSD3-208ENST00000433972 PIK3C2AO00443 1686 aa21.11■□□□□ 0.97
RPUSD3-208ENST00000433972 OVOS2A0A0G2JMS6 1433 aa21.11■□□□□ 0.97
RPUSD3-208ENST00000433972 OVOS2A0A0J9YW53 1432 aa21.11■□□□□ 0.97
RPUSD3-208ENST00000433972 OVOS2Q6IE36 1432 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms