RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 LILRB3O75022 631 aa10.05□□□□□ -0.8
PTPN4-205ENST00000433888 MPNDQ8N594 471 aa10.05□□□□□ -0.8
PTPN4-205ENST00000433888 PER1O15534 1290 aaPredicted RBP10.04□□□□□ -0.8
PTPN4-205ENST00000433888 SNRPBP14678 240 aaKnown RBP10.04□□□□□ -0.8
PTPN4-205ENST00000433888 VARSP26640 1264 aaKnown RBP10.04□□□□□ -0.8
PTPN4-205ENST00000433888 QPCTQ16769 361 aa10.04□□□□□ -0.8
PTPN4-205ENST00000433888 CTHP32929 405 aa10.03□□□□□ -0.8
PTPN4-205ENST00000433888 CSPP1Q1MSJ5 1256 aa10.03□□□□□ -0.8
PTPN4-205ENST00000433888 TRIM47Q96LD4 638 aa10.03□□□□□ -0.8
PTPN4-205ENST00000433888 MAP10Q9P2G4 905 aa10.03□□□□□ -0.8
PTPN4-205ENST00000433888 RTL5Q5HYW3 569 aaPredicted RBP10.01□□□□□ -0.81
PTPN4-205ENST00000433888 SENP2Q9HC62 589 aa10.01□□□□□ -0.81
PTPN4-205ENST00000433888 TLL2Q9Y6L7 1015 aa10.01□□□□□ -0.81
PTPN4-205ENST00000433888 WASF2Q9Y6W5 498 aa10.01□□□□□ -0.81
PTPN4-205ENST00000433888 NFX1Q12986 1120 aaKnown RBP10□□□□□ -0.81
PTPN4-205ENST00000433888 TRIM46Q7Z4K8 759 aa9.99□□□□□ -0.81
PTPN4-205ENST00000433888 FOXJ1Q92949 421 aa9.99□□□□□ -0.81
PTPN4-205ENST00000433888 CAPN5O15484 640 aaPredicted RBP9.98□□□□□ -0.81
PTPN4-205ENST00000433888 PLEKHG3A1L390 1219 aa9.97□□□□□ -0.81
PTPN4-205ENST00000433888 NUTM2BA6NNL0 878 aaPredicted RBP9.97□□□□□ -0.81
PTPN4-205ENST00000433888 NUTM2EB1AL46 878 aaPredicted RBP9.97□□□□□ -0.81
PTPN4-205ENST00000433888 CLK2P49760 499 aaKnown RBP9.97□□□□□ -0.81
PTPN4-205ENST00000433888 C4orf48Q5BLP8 95 aa9.97□□□□□ -0.81
PTPN4-205ENST00000433888 NUTM2DQ5VT03 806 aaPredicted RBP9.97□□□□□ -0.81
PTPN4-205ENST00000433888 NUTM2AQ8IVF1 878 aaPredicted RBP9.97□□□□□ -0.81
PTPN4-205ENST00000433888 KIFC2Q96AC6 838 aa9.97□□□□□ -0.81
PTPN4-205ENST00000433888 CDK15Q96Q40 435 aa9.97□□□□□ -0.81
PTPN4-205ENST00000433888 WFS1O76024 890 aa9.96□□□□□ -0.82
PTPN4-205ENST00000433888 LCE2CQ5TA81 110 aa9.96□□□□□ -0.82
PTPN4-205ENST00000433888 KLF16Q9BXK1 252 aaPredicted RBP9.96□□□□□ -0.82
PTPN4-205ENST00000433888 RSPH6AQ9H0K4 717 aa9.96□□□□□ -0.82
PTPN4-205ENST00000433888 FAM174AQ8TBP5 190 aa9.95□□□□□ -0.82
PTPN4-205ENST00000433888 POLR3EQ9NVU0 708 aa9.95□□□□□ -0.82
PTPN4-205ENST00000433888 BMP1P13497 986 aa9.94□□□□□ -0.82
PTPN4-205ENST00000433888 NNTQ13423 1086 aa9.94□□□□□ -0.82
PTPN4-205ENST00000433888 TSC1Q92574 1164 aa9.94□□□□□ -0.82
PTPN4-205ENST00000433888 TERTO14746 1132 aaKnown RBP9.92□□□□□ -0.82
PTPN4-205ENST00000433888 ADH1CP00326 375 aa9.92□□□□□ -0.82
PTPN4-205ENST00000433888 TIMP2P16035 220 aa9.92□□□□□ -0.82
PTPN4-205ENST00000433888 FBXO31Q5XUX0 539 aaPredicted RBP9.92□□□□□ -0.82
PTPN4-205ENST00000433888 SH3RF1Q7Z6J0 888 aa9.92□□□□□ -0.82
PTPN4-205ENST00000433888 HELBQ8NG08 1087 aaPredicted RBP9.91□□□□□ -0.82
PTPN4-205ENST00000433888 GPBP1L1Q9HC44 474 aaPredicted RBP9.91□□□□□ -0.82
PTPN4-205ENST00000433888 GRM5P41594 1212 aa9.9□□□□□ -0.82
PTPN4-205ENST00000433888 CTDSPL2Q05D32 466 aa9.9□□□□□ -0.82
PTPN4-205ENST00000433888 SKIV2LQ15477 1246 aaKnown RBP9.9□□□□□ -0.82
PTPN4-205ENST00000433888 BPHLQ86WA6 291 aaPredicted RBP9.9□□□□□ -0.82
PTPN4-205ENST00000433888 ARMC2Q8NEN0 867 aa9.9□□□□□ -0.82
PTPN4-205ENST00000433888 C1QTNF2Q9BXJ5 285 aa9.9□□□□□ -0.82
PTPN4-205ENST00000433888 KDM4CQ9H3R0 1056 aa9.9□□□□□ -0.82
PTPN4-205ENST00000433888 SH3BP5LQ7L8J4 393 aa9.89□□□□□ -0.83
PTPN4-205ENST00000433888 ZFP42Q96MM3 310 aa9.89□□□□□ -0.83
PTPN4-205ENST00000433888 FAM117AQ9C073 453 aa9.89□□□□□ -0.83
PTPN4-205ENST00000433888 WIPF1O43516 503 aa9.88□□□□□ -0.83
PTPN4-205ENST00000433888 SH3D19Q5HYK7 790 aa9.88□□□□□ -0.83
PTPN4-205ENST00000433888 PROCA1Q8NCQ7 364 aaPredicted RBP9.88□□□□□ -0.83
PTPN4-205ENST00000433888 BCANQ96GW7 911 aa9.88□□□□□ -0.83
PTPN4-205ENST00000433888 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.88□□□□□ -0.83
PTPN4-205ENST00000433888 NR3C2P08235 984 aa9.87□□□□□ -0.83
PTPN4-205ENST00000433888 WDR4P57081 412 aaKnown RBP9.87□□□□□ -0.83
PTPN4-205ENST00000433888 NR5A1Q13285 461 aa9.87□□□□□ -0.83
PTPN4-205ENST00000433888 ARID5BQ14865 1188 aa9.87□□□□□ -0.83
PTPN4-205ENST00000433888 AGERQ15109 404 aa9.86□□□□□ -0.83
PTPN4-205ENST00000433888 PPP2R2DQ66LE6 453 aa9.86□□□□□ -0.83
PTPN4-205ENST00000433888 MRPL14Q6P1L8 145 aaKnown RBP9.86□□□□□ -0.83
PTPN4-205ENST00000433888 TRMT44Q8IYL2 757 aaKnown RBP9.85□□□□□ -0.83
PTPN4-205ENST00000433888 DDRGK1Q96HY6 314 aa9.85□□□□□ -0.83
PTPN4-205ENST00000433888 NXF1Q9UBU9 619 aaKnown RBP9.85□□□□□ -0.83
PTPN4-205ENST00000433888 NBPF14Q5TI25 921 aa9.84□□□□□ -0.83
PTPN4-205ENST00000433888 LRRN4Q8WUT4 740 aa9.84□□□□□ -0.83
PTPN4-205ENST00000433888 GPKOWQ92917 476 aaPredicted RBP eCLIP9.84□□□□□ -0.83
PTPN4-205ENST00000433888 ITPKCQ96DU7 683 aa9.84□□□□□ -0.83
PTPN4-205ENST00000433888 ZFAND3Q9H8U3 227 aa9.84□□□□□ -0.83
PTPN4-205ENST00000433888 ZIC2O95409 532 aaPredicted RBP9.83□□□□□ -0.84
PTPN4-205ENST00000433888 MAP4K5Q9Y4K4 846 aa9.83□□□□□ -0.84
PTPN4-205ENST00000433888 PURBQ96QR8 312 aaKnown RBP9.82□□□□□ -0.84
PTPN4-205ENST00000433888 NPAS3Q8IXF0 933 aa9.81□□□□□ -0.84
PTPN4-205ENST00000433888 SCARF1Q14162 830 aa9.8□□□□□ -0.84
PTPN4-205ENST00000433888 PDXDC2PQ6P474 469 aa9.8□□□□□ -0.84
PTPN4-205ENST00000433888 ERFEQ4G0M1 354 aa9.79□□□□□ -0.84
PTPN4-205ENST00000433888 FKBPLQ9UIM3 349 aa9.79□□□□□ -0.84
PTPN4-205ENST00000433888 MAGEB6P1A0A0J9YX57 407 aa9.78□□□□□ -0.84
PTPN4-205ENST00000433888 NR6A1Q15406 480 aa9.78□□□□□ -0.84
PTPN4-205ENST00000433888 VASH1Q7L8A9 365 aaPredicted RBP9.78□□□□□ -0.84
PTPN4-205ENST00000433888 SLC16A10Q8TF71 515 aa9.78□□□□□ -0.84
PTPN4-205ENST00000433888 H3BM21 787 aa9.77□□□□□ -0.85
PTPN4-205ENST00000433888 SLC24A1O60721 1099 aa9.77□□□□□ -0.85
PTPN4-205ENST00000433888 MEIOBQ8N635 442 aa9.77□□□□□ -0.85
PTPN4-205ENST00000433888 OCSTAMPQ9BR26 566 aa9.77□□□□□ -0.85
PTPN4-205ENST00000433888 CARD14Q9BXL6 1004 aa9.77□□□□□ -0.85
PTPN4-205ENST00000433888 SOBPA7XYQ1 873 aa9.76□□□□□ -0.85
PTPN4-205ENST00000433888 FSHRP23945 695 aa9.76□□□□□ -0.85
PTPN4-205ENST00000433888 VEGFBP49765 207 aa9.75□□□□□ -0.85
PTPN4-205ENST00000433888 INSM1Q01101 510 aaPredicted RBP9.75□□□□□ -0.85
PTPN4-205ENST00000433888 EPS8L1Q8TE68 723 aa9.75□□□□□ -0.85
PTPN4-205ENST00000433888 ZC3H4Q9UPT8 1303 aaKnown RBP9.75□□□□□ -0.85
PTPN4-205ENST00000433888 CCDC116Q8IYX3 515 aa9.74□□□□□ -0.85
PTPN4-205ENST00000433888 ARHGAP9Q9BRR9 750 aa9.74□□□□□ -0.85
PTPN4-205ENST00000433888 AP1G2O75843 785 aa9.73□□□□□ -0.85
PTPN4-205ENST00000433888 LORP23490 312 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms