RNA–Protein interactions for RNA: ENST00000433730.1

KHDC1-203, Transcript of KH domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene KHDC1, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-203ENST00000433730 POLR3AO14802 1390 aaPredicted RBP29.9■■■□□ 2.38
KHDC1-203ENST00000433730 SRPK2P78362 688 aaKnown RBP29.9■■■□□ 2.38
KHDC1-203ENST00000433730 GJD4Q96KN9 370 aaPredicted RBP29.89■■■□□ 2.38
KHDC1-203ENST00000433730 COL14A1Q05707 1796 aaKnown RBP29.89■■■□□ 2.38
KHDC1-203ENST00000433730 GLI3P10071 1580 aa29.88■■■□□ 2.37
KHDC1-203ENST00000433730 ACEP12821 1306 aa29.87■■■□□ 2.37
KHDC1-203ENST00000433730 RALGAPBQ86X10 1494 aa29.87■■■□□ 2.37
KHDC1-203ENST00000433730 PHRF1Q9P1Y6 1649 aaKnown RBP29.86■■■□□ 2.37
KHDC1-203ENST00000433730 ATAD2Q6PL18 1390 aa29.86■■■□□ 2.37
KHDC1-203ENST00000433730 TONSLQ96HA7 1378 aa29.86■■■□□ 2.37
KHDC1-203ENST00000433730 PPIP5K1Q6PFW1 1433 aa29.86■■■□□ 2.37
KHDC1-203ENST00000433730 NRAPQ86VF7 1730 aa29.85■■■□□ 2.37
KHDC1-203ENST00000433730 PLEKHG3A1L390 1219 aa29.85■■■□□ 2.37
KHDC1-203ENST00000433730 NBPF8Q3BBV2 869 aa29.82■■■□□ 2.36
KHDC1-203ENST00000433730 CABP2Q9NPB3 220 aa29.82■■■□□ 2.36
KHDC1-203ENST00000433730 EVC2Q86UK5 1308 aa29.81■■■□□ 2.36
KHDC1-203ENST00000433730 FAM83GA6ND36 823 aa29.8■■■□□ 2.36
KHDC1-203ENST00000433730 VPS72Q15906 364 aa29.8■■■□□ 2.36
KHDC1-203ENST00000433730 EP400Q96L91 3159 aa29.79■■■□□ 2.36
KHDC1-203ENST00000433730 CCDC9Q9Y3X0 531 aaKnown RBP29.78■■■□□ 2.36
KHDC1-203ENST00000433730 BRWD3Q6RI45 1802 aa29.78■■■□□ 2.36
KHDC1-203ENST00000433730 BRD4O60885 1362 aaPredicted RBP29.76■■■□□ 2.35
KHDC1-203ENST00000433730 PRDM11Q9NQV5 511 aa29.75■■■□□ 2.35
KHDC1-203ENST00000433730 BTG4Q9NY30 223 aa29.75■■■□□ 2.35
KHDC1-203ENST00000433730 NRKQ7Z2Y5 1582 aa29.73■■■□□ 2.35
KHDC1-203ENST00000433730 ABTB2Q8N961 1025 aa29.73■■■□□ 2.35
KHDC1-203ENST00000433730 NUTM2GQ5VZR2 741 aa29.72■■■□□ 2.35
KHDC1-203ENST00000433730 CARD11Q9BXL7 1154 aa29.72■■■□□ 2.35
KHDC1-203ENST00000433730 USP6P35125 1406 aa29.71■■■□□ 2.35
KHDC1-203ENST00000433730 AKAP12Q02952 1782 aa29.7■■■□□ 2.35
KHDC1-203ENST00000433730 KIAA0232Q92628 1395 aa29.7■■■□□ 2.35
KHDC1-203ENST00000433730 SBNO2Q9Y2G9 1366 aa29.7■■■□□ 2.35
KHDC1-203ENST00000433730 CABP1Q9NZU7 370 aa29.7■■■□□ 2.35
KHDC1-203ENST00000433730 NLRP13Q86W25 1043 aa29.66■■■□□ 2.34
KHDC1-203ENST00000433730 SEPT12Q8IYM1 358 aa29.66■■■□□ 2.34
KHDC1-203ENST00000433730 USP19O94966 1318 aa29.66■■■□□ 2.34
KHDC1-203ENST00000433730 A0A0G2JS52 829 aa29.64■■■□□ 2.34
KHDC1-203ENST00000433730 ZC3H6P61129 1189 aaKnown RBP29.64■■■□□ 2.34
KHDC1-203ENST00000433730 MYT1Q01538 1121 aa29.64■■■□□ 2.34
KHDC1-203ENST00000433730 ONECUT3O60422 494 aaPredicted RBP29.63■■■□□ 2.33
KHDC1-203ENST00000433730 PIK3C2AO00443 1686 aa29.63■■■□□ 2.33
KHDC1-203ENST00000433730 CHRNA2Q15822 529 aa29.62■■■□□ 2.33
KHDC1-203ENST00000433730 CCDC125Q86Z20 511 aa29.61■■■□□ 2.33
KHDC1-203ENST00000433730 CPDO75976 1380 aa29.61■■■□□ 2.33
KHDC1-203ENST00000433730 LMO7Q8WWI1 1683 aa29.6■■■□□ 2.33
KHDC1-203ENST00000433730 SPATA31A5Q5VU36 1347 aa29.6■■■□□ 2.33
KHDC1-203ENST00000433730 SPATA31A7Q8IWB4 1347 aa29.6■■■□□ 2.33
KHDC1-203ENST00000433730 MON2Q7Z3U7 1717 aa29.59■■■□□ 2.33
KHDC1-203ENST00000433730 FAM98CQ17RN3 349 aaKnown RBP29.59■■■□□ 2.33
KHDC1-203ENST00000433730 ZNF692Q9BU19 519 aaPredicted RBP29.59■■■□□ 2.33
KHDC1-203ENST00000433730 SSH2Q76I76 1423 aa29.58■■■□□ 2.33
KHDC1-203ENST00000433730 KRT27Q7Z3Y8 459 aa29.58■■■□□ 2.33
KHDC1-203ENST00000433730 THSD7AQ9UPZ6 1657 aa29.57■■■□□ 2.32
KHDC1-203ENST00000433730 SLIT3O75094 1523 aa29.57■■■□□ 2.32
KHDC1-203ENST00000433730 STRN4Q9NRL3 753 aa29.57■■■□□ 2.32
KHDC1-203ENST00000433730 GCP02774 474 aa29.56■■■□□ 2.32
KHDC1-203ENST00000433730 NLRP6P59044 892 aa29.56■■■□□ 2.32
KHDC1-203ENST00000433730 BLMP54132 1417 aaPredicted RBP29.55■■■□□ 2.32
KHDC1-203ENST00000433730 CPSF1Q10570 1443 aaKnown RBP29.54■■■□□ 2.32
KHDC1-203ENST00000433730 CAMTA1Q9Y6Y1 1673 aa29.53■■■□□ 2.32
KHDC1-203ENST00000433730 KTN1Q86UP2 1357 aaKnown RBP29.52■■■□□ 2.32
KHDC1-203ENST00000433730 SPATA31A1Q5TZJ5 1347 aa29.52■■■□□ 2.32
KHDC1-203ENST00000433730 TTC21AQ8NDW8 1320 aa29.52■■■□□ 2.32
KHDC1-203ENST00000433730 EVA1CP58658 441 aa29.52■■■□□ 2.32
KHDC1-203ENST00000433730 TTC21BQ7Z4L5 1316 aa29.51■■■□□ 2.32
KHDC1-203ENST00000433730 SF3B2Q13435 895 aaKnown RBP29.48■■■□□ 2.31
KHDC1-203ENST00000433730 COL5A2P05997 1499 aaPredicted RBP29.47■■■□□ 2.31
KHDC1-203ENST00000433730 ZBTB7CA1YPR0 619 aa29.46■■■□□ 2.31
KHDC1-203ENST00000433730 RGPD1P0DJD0 1748 aa29.45■■■□□ 2.31
KHDC1-203ENST00000433730 SLC24A1O60721 1099 aa29.45■■■□□ 2.31
KHDC1-203ENST00000433730 TMC1Q8TDI8 760 aa29.45■■■□□ 2.31
KHDC1-203ENST00000433730 CLSPNQ9HAW4 1339 aa29.45■■■□□ 2.3
KHDC1-203ENST00000433730 USP54Q70EL1 1684 aa29.44■■■□□ 2.3
KHDC1-203ENST00000433730 AATKQ6ZMQ8 1374 aa29.44■■■□□ 2.3
KHDC1-203ENST00000433730 KCNH5Q8NCM2 988 aa29.44■■■□□ 2.3
KHDC1-203ENST00000433730 PUS7Q96PZ0 661 aaKnown RBP29.44■■■□□ 2.3
KHDC1-203ENST00000433730 USP35Q9P2H5 1018 aa29.44■■■□□ 2.3
KHDC1-203ENST00000433730 COL18A1P39060 1754 aa29.44■■■□□ 2.3
KHDC1-203ENST00000433730 CD163L1Q9NR16 1453 aa29.43■■■□□ 2.3
KHDC1-203ENST00000433730 HDGFL2Q7Z4V5 671 aaPredicted RBP29.43■■■□□ 2.3
KHDC1-203ENST00000433730 ST20-MTHFSA0A0A6YYL1 179 aa29.42■■■□□ 2.3
KHDC1-203ENST00000433730 LARP1Q6PKG0 1096 aaKnown RBP29.42■■■□□ 2.3
KHDC1-203ENST00000433730 BARGINQ6ZT62 677 aa29.41■■■□□ 2.3
KHDC1-203ENST00000433730 PCGF6Q9BYE7 350 aa29.41■■■□□ 2.3
KHDC1-203ENST00000433730 RGPD5Q99666 1765 aa29.41■■■□□ 2.3
KHDC1-203ENST00000433730 NINLQ9Y2I6 1382 aa29.4■■■□□ 2.3
KHDC1-203ENST00000433730 CRB1P82279 1406 aa29.39■■■□□ 2.3
KHDC1-203ENST00000433730 TCP11L2Q8N4U5 519 aa29.39■■■□□ 2.3
KHDC1-203ENST00000433730 TESK2Q96S53 571 aa29.39■■■□□ 2.3
KHDC1-203ENST00000433730 TERF2IPQ9NYB0 399 aa29.39■■■□□ 2.3
KHDC1-203ENST00000433730 NFAT5O94916 1531 aa29.39■■■□□ 2.3
KHDC1-203ENST00000433730 EDC4Q6P2E9 1401 aaKnown RBP29.38■■■□□ 2.29
KHDC1-203ENST00000433730 PARP4Q9UKK3 1724 aaKnown RBP29.38■■■□□ 2.29
KHDC1-203ENST00000433730 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.38■■■□□ 2.29
KHDC1-203ENST00000433730 TIMELESSQ9UNS1 1208 aa29.38■■■□□ 2.29
KHDC1-203ENST00000433730 THRAP3Q9Y2W1 955 aaKnown RBP29.38■■■□□ 2.29
KHDC1-203ENST00000433730 USP47Q96K76 1375 aa29.38■■■□□ 2.29
KHDC1-203ENST00000433730 SLC12A5Q9H2X9 1139 aa29.37■■■□□ 2.29
KHDC1-203ENST00000433730 ZRANB1Q9UGI0 708 aa29.37■■■□□ 2.29
KHDC1-203ENST00000433730 ABCC6O95255 1503 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms