RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 TTC21BQ7Z4L5 1316 aa14.13□□□□□ -0.15
NEFM-202ENST00000433454 SCAF1Q9H7N4 1312 aaKnown RBP14.12□□□□□ -0.15
NEFM-202ENST00000433454 SSH2Q76I76 1423 aa14.12□□□□□ -0.15
NEFM-202ENST00000433454 ADAMTS8Q9UP79 889 aa14.12□□□□□ -0.15
NEFM-202ENST00000433454 SHPRHQ149N8 1683 aa14.12□□□□□ -0.15
NEFM-202ENST00000433454 NCOA3Q9Y6Q9 1424 aa14.11□□□□□ -0.15
NEFM-202ENST00000433454 COG3Q96JB2 828 aa14.11□□□□□ -0.15
NEFM-202ENST00000433454 TMEM94Q12767 1356 aa14.11□□□□□ -0.15
NEFM-202ENST00000433454 TTC21AQ8NDW8 1320 aa14.11□□□□□ -0.15
NEFM-202ENST00000433454 C19orf44Q9H6X5 657 aa14.1□□□□□ -0.15
NEFM-202ENST00000433454 PHF8Q9UPP1 1060 aa14.09□□□□□ -0.15
NEFM-202ENST00000433454 OVOS2A0A0J9YW53 1432 aa14.09□□□□□ -0.15
NEFM-202ENST00000433454 DCCP43146 1447 aa14.09□□□□□ -0.15
NEFM-202ENST00000433454 OVOS2Q6IE36 1432 aa14.09□□□□□ -0.15
NEFM-202ENST00000433454 AATKQ6ZMQ8 1374 aa14.08□□□□□ -0.15
NEFM-202ENST00000433454 ZRANB1Q9UGI0 708 aa14.08□□□□□ -0.16
NEFM-202ENST00000433454 COL3A1P02461 1466 aaPredicted RBP14.07□□□□□ -0.16
NEFM-202ENST00000433454 MAP2P11137 1827 aaKnown RBP14.07□□□□□ -0.16
NEFM-202ENST00000433454 SMG6Q86US8 1419 aaKnown RBP14.07□□□□□ -0.16
NEFM-202ENST00000433454 ESCO1Q5FWF5 840 aa14.07□□□□□ -0.16
NEFM-202ENST00000433454 PIK3C2AO00443 1686 aa14.06□□□□□ -0.16
NEFM-202ENST00000433454 KIF1AQ12756 1690 aa14.06□□□□□ -0.16
NEFM-202ENST00000433454 PNPLA6Q8IY17 1366 aa14.06□□□□□ -0.16
NEFM-202ENST00000433454 ATF3P18847 181 aa14.05□□□□□ -0.16
NEFM-202ENST00000433454 POLKQ9UBT6 870 aa14.05□□□□□ -0.16
NEFM-202ENST00000433454 CDK12Q9NYV4 1490 aaPredicted RBP14.05□□□□□ -0.16
NEFM-202ENST00000433454 SENP3-EIF4A1A0A087X0R7 540 aa14.05□□□□□ -0.16
NEFM-202ENST00000433454 C1orf167Q5SNV9 1468 aa14.05□□□□□ -0.16
NEFM-202ENST00000433454 DMRT2Q9Y5R5 561 aa14.04□□□□□ -0.16
NEFM-202ENST00000433454 MSH6P52701 1360 aa14.04□□□□□ -0.16
NEFM-202ENST00000433454 USP31Q70CQ4 1352 aa14.04□□□□□ -0.16
NEFM-202ENST00000433454 NUDCQ9Y266 331 aa14.04□□□□□ -0.16
NEFM-202ENST00000433454 USP54Q70EL1 1684 aa14.04□□□□□ -0.16
NEFM-202ENST00000433454 XIRP1Q702N8 1843 aaKnown RBP14.04□□□□□ -0.16
NEFM-202ENST00000433454 MST1RQ04912 1400 aa14.03□□□□□ -0.16
NEFM-202ENST00000433454 ZNF335Q9H4Z2 1342 aaPredicted RBP14.03□□□□□ -0.16
NEFM-202ENST00000433454 GTF3C3Q9Y5Q9 886 aa14.03□□□□□ -0.16
NEFM-202ENST00000433454 LRRC7Q96NW7 1537 aa14.03□□□□□ -0.16
NEFM-202ENST00000433454 PPM1GO15355 546 aaPredicted RBP14.03□□□□□ -0.16
NEFM-202ENST00000433454 CADPS2Q86UW7 1296 aa14.03□□□□□ -0.16
NEFM-202ENST00000433454 FBLN1P23142 703 aa14.02□□□□□ -0.16
NEFM-202ENST00000433454 CCDC146Q8IYE0 955 aa14.02□□□□□ -0.16
NEFM-202ENST00000433454 ORAI2Q96SN7 254 aa14.02□□□□□ -0.16
NEFM-202ENST00000433454 EMILIN1Q9Y6C2 1016 aa14.02□□□□□ -0.16
NEFM-202ENST00000433454 DIAPH1O60610 1272 aaKnown RBP14.02□□□□□ -0.17
NEFM-202ENST00000433454 PSME1Q06323 249 aa14.02□□□□□ -0.17
NEFM-202ENST00000433454 SALL2Q9Y467 1007 aaPredicted RBP14.02□□□□□ -0.17
NEFM-202ENST00000433454 PAK3O75914 559 aaPredicted RBP14.01□□□□□ -0.17
NEFM-202ENST00000433454 U2AF1L5P0DN76 240 aaPredicted RBP14.01□□□□□ -0.17
NEFM-202ENST00000433454 U2AF1Q01081 240 aaKnown RBP eCLIP14.01□□□□□ -0.17
NEFM-202ENST00000433454 RRS1Q15050 365 aaKnown RBP14.01□□□□□ -0.17
NEFM-202ENST00000433454 MARF1Q9Y4F3 1742 aaKnown RBP14□□□□□ -0.17
NEFM-202ENST00000433454 NLRP6P59044 892 aa14□□□□□ -0.17
NEFM-202ENST00000433454 PDE3BQ13370 1112 aa14□□□□□ -0.17
NEFM-202ENST00000433454 ABTB2Q8N961 1025 aa14□□□□□ -0.17
NEFM-202ENST00000433454 U2SURPO15042 1029 aaKnown RBP14□□□□□ -0.17
NEFM-202ENST00000433454 APAF1O14727 1248 aa13.99□□□□□ -0.17
NEFM-202ENST00000433454 FOXO3O43524 673 aa13.99□□□□□ -0.17
NEFM-202ENST00000433454 NGEFQ8N5V2 710 aa13.99□□□□□ -0.17
NEFM-202ENST00000433454 RUNDC1Q96C34 613 aa13.99□□□□□ -0.17
NEFM-202ENST00000433454 IQSEC2Q5JU85 1478 aa13.98□□□□□ -0.17
NEFM-202ENST00000433454 TRPM3Q9HCF6 1732 aaPredicted RBP13.97□□□□□ -0.17
NEFM-202ENST00000433454 SOX12O15370 315 aa13.97□□□□□ -0.17
NEFM-202ENST00000433454 PEAK1Q9H792 1746 aa13.97□□□□□ -0.17
NEFM-202ENST00000433454 NUTM2GQ5VZR2 741 aa13.96□□□□□ -0.17
NEFM-202ENST00000433454 PNNQ9H307 717 aaKnown RBP13.95□□□□□ -0.18
NEFM-202ENST00000433454 MAP3K19Q56UN5 1328 aa13.95□□□□□ -0.18
NEFM-202ENST00000433454 ZNF521Q96K83 1311 aa13.95□□□□□ -0.18
NEFM-202ENST00000433454 SBNO1A3KN83 1393 aa13.95□□□□□ -0.18
NEFM-202ENST00000433454 FLT4P35916 1363 aa13.95□□□□□ -0.18
NEFM-202ENST00000433454 IL13P35225 146 aa13.95□□□□□ -0.18
NEFM-202ENST00000433454 XPCQ01831 940 aaPredicted RBP13.95□□□□□ -0.18
NEFM-202ENST00000433454 KRT28Q7Z3Y7 464 aa13.94□□□□□ -0.18
NEFM-202ENST00000433454 TCP11L2Q8N4U5 519 aa13.94□□□□□ -0.18
NEFM-202ENST00000433454 KIF24Q5T7B8 1368 aa13.94□□□□□ -0.18
NEFM-202ENST00000433454 NPHP3Q7Z494 1330 aa13.94□□□□□ -0.18
NEFM-202ENST00000433454 MAPK8IP3Q9UPT6 1336 aa13.94□□□□□ -0.18
NEFM-202ENST00000433454 FCHSD2O94868 740 aa13.93□□□□□ -0.18
NEFM-202ENST00000433454 NFAT5O94916 1531 aa13.93□□□□□ -0.18
NEFM-202ENST00000433454 PLEKHF1Q96S99 279 aa13.93□□□□□ -0.18
NEFM-202ENST00000433454 ALS2Q96Q42 1657 aa13.92□□□□□ -0.18
NEFM-202ENST00000433454 NEFLP07196 543 aa13.92□□□□□ -0.18
NEFM-202ENST00000433454 AMPHP49418 695 aa13.92□□□□□ -0.18
NEFM-202ENST00000433454 GOLGA2Q08379 1002 aa13.92□□□□□ -0.18
NEFM-202ENST00000433454 KCNH5Q8NCM2 988 aa13.92□□□□□ -0.18
NEFM-202ENST00000433454 CDCA7LQ96GN5 454 aa13.92□□□□□ -0.18
NEFM-202ENST00000433454 SUPT16HQ9Y5B9 1047 aaKnown RBP13.92□□□□□ -0.18
NEFM-202ENST00000433454 SLIT3O75094 1523 aa13.91□□□□□ -0.18
NEFM-202ENST00000433454 LTN1O94822 1766 aa13.91□□□□□ -0.18
NEFM-202ENST00000433454 EIF4A2Q14240 407 aaKnown RBP13.91□□□□□ -0.18
NEFM-202ENST00000433454 NCBP3Q53F19 620 aaKnown RBP13.91□□□□□ -0.18
NEFM-202ENST00000433454 RTL1A6NKG5 1358 aa13.91□□□□□ -0.18
NEFM-202ENST00000433454 NEFMP07197 916 aa13.91□□□□□ -0.18
NEFM-202ENST00000433454 HSP90AB2PQ58FF8 381 aa13.91□□□□□ -0.18
NEFM-202ENST00000433454 LMOD2Q6P5Q4 547 aa13.91□□□□□ -0.18
NEFM-202ENST00000433454 RSPH6AQ9H0K4 717 aa13.91□□□□□ -0.18
NEFM-202ENST00000433454 SLAIN2Q9P270 581 aa13.9□□□□□ -0.18
NEFM-202ENST00000433454 RRP7AQ9Y3A4 280 aaKnown RBP13.9□□□□□ -0.18
NEFM-202ENST00000433454 RGPD1P0DJD0 1748 aa13.9□□□□□ -0.18
NEFM-202ENST00000433454 PRKAR2BP31323 418 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms