RNA–Protein interactions for RNA: ENST00000432725.1

SF1-208, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 475 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-208ENST00000432725 PLEKHG5O94827 1062 aa22.09■■□□□ 1.13
SF1-208ENST00000432725 TRPM1Q7Z4N2 1603 aa22.09■■□□□ 1.13
SF1-208ENST00000432725 ABCA3Q99758 1704 aa22.09■■□□□ 1.13
SF1-208ENST00000432725 TOPAZ1Q8N9V7 1692 aa22.07■■□□□ 1.12
SF1-208ENST00000432725 ACEP12821 1306 aa22.07■■□□□ 1.12
SF1-208ENST00000432725 FAM83GA6ND36 823 aa22.07■■□□□ 1.12
SF1-208ENST00000432725 PAK3O75914 559 aaPredicted RBP22.07■■□□□ 1.12
SF1-208ENST00000432725 NBPF8Q3BBV2 869 aa22.07■■□□□ 1.12
SF1-208ENST00000432725 ROCK2O75116 1388 aaKnown RBP22.07■■□□□ 1.12
SF1-208ENST00000432725 SRPK2P78362 688 aaKnown RBP22.06■■□□□ 1.12
SF1-208ENST00000432725 RALGAPBQ86X10 1494 aa22.05■■□□□ 1.12
SF1-208ENST00000432725 VPS72Q15906 364 aa22.05■■□□□ 1.12
SF1-208ENST00000432725 CABP2Q9NPB3 220 aa22.04■■□□□ 1.12
SF1-208ENST00000432725 ATAD2Q6PL18 1390 aa22.03■■□□□ 1.12
SF1-208ENST00000432725 DIEXFQ68CQ4 756 aaKnown RBP22.03■■□□□ 1.12
SF1-208ENST00000432725 GLI3P10071 1580 aa22.03■■□□□ 1.12
SF1-208ENST00000432725 QRICH2Q9H0J4 1663 aa22.02■■□□□ 1.12
SF1-208ENST00000432725 PPIP5K1Q6PFW1 1433 aa22.02■■□□□ 1.12
SF1-208ENST00000432725 NWD2Q9ULI1 1742 aa22.02■■□□□ 1.12
SF1-208ENST00000432725 PLCH1Q4KWH8 1693 aa22.01■■□□□ 1.11
SF1-208ENST00000432725 EVC2Q86UK5 1308 aa22■■□□□ 1.11
SF1-208ENST00000432725 CRYBG1Q9Y4K1 1723 aa22■■□□□ 1.11
SF1-208ENST00000432725 ONECUT3O60422 494 aaPredicted RBP21.99■■□□□ 1.11
SF1-208ENST00000432725 BTG4Q9NY30 223 aa21.99■■□□□ 1.11
SF1-208ENST00000432725 BRD4O60885 1362 aaPredicted RBP21.99■■□□□ 1.11
SF1-208ENST00000432725 CABP1Q9NZU7 370 aa21.98■■□□□ 1.11
SF1-208ENST00000432725 COL14A1Q05707 1796 aaKnown RBP21.97■■□□□ 1.11
SF1-208ENST00000432725 EIF4G2P78344 907 aaKnown RBP eCLIP21.97■■□□□ 1.11
SF1-208ENST00000432725 ABTB2Q8N961 1025 aa21.96■■□□□ 1.11
SF1-208ENST00000432725 NUTM2GQ5VZR2 741 aa21.95■■□□□ 1.1
SF1-208ENST00000432725 PRDM11Q9NQV5 511 aa21.95■■□□□ 1.1
SF1-208ENST00000432725 CCDC9Q9Y3X0 531 aaKnown RBP21.95■■□□□ 1.1
SF1-208ENST00000432725 SEPT12Q8IYM1 358 aa21.94■■□□□ 1.1
SF1-208ENST00000432725 CARD11Q9BXL7 1154 aa21.94■■□□□ 1.1
SF1-208ENST00000432725 KIAA0232Q92628 1395 aa21.94■■□□□ 1.1
SF1-208ENST00000432725 NRAPQ86VF7 1730 aa21.94■■□□□ 1.1
SF1-208ENST00000432725 USP19O94966 1318 aa21.93■■□□□ 1.1
SF1-208ENST00000432725 SBNO2Q9Y2G9 1366 aa21.93■■□□□ 1.1
SF1-208ENST00000432725 PHRF1Q9P1Y6 1649 aaKnown RBP21.92■■□□□ 1.1
SF1-208ENST00000432725 USP6P35125 1406 aa21.92■■□□□ 1.1
SF1-208ENST00000432725 NLRP13Q86W25 1043 aa21.91■■□□□ 1.1
SF1-208ENST00000432725 CCDC125Q86Z20 511 aa21.91■■□□□ 1.1
SF1-208ENST00000432725 SSH2Q76I76 1423 aa21.9■■□□□ 1.1
SF1-208ENST00000432725 ZC3H6P61129 1189 aaKnown RBP21.9■■□□□ 1.1
SF1-208ENST00000432725 CPDO75976 1380 aa21.89■■□□□ 1.1
SF1-208ENST00000432725 SPATA31A5Q5VU36 1347 aa21.89■■□□□ 1.1
SF1-208ENST00000432725 SPATA31A7Q8IWB4 1347 aa21.89■■□□□ 1.1
SF1-208ENST00000432725 CHRNA2Q15822 529 aa21.89■■□□□ 1.09
SF1-208ENST00000432725 ZNF692Q9BU19 519 aaPredicted RBP21.88■■□□□ 1.09
SF1-208ENST00000432725 NRKQ7Z2Y5 1582 aa21.87■■□□□ 1.09
SF1-208ENST00000432725 GCP02774 474 aa21.87■■□□□ 1.09
SF1-208ENST00000432725 HSPA5P11021 654 aaKnown RBP21.86■■□□□ 1.09
SF1-208ENST00000432725 FAM98CQ17RN3 349 aaKnown RBP21.86■■□□□ 1.09
SF1-208ENST00000432725 KRT27Q7Z3Y8 459 aa21.86■■□□□ 1.09
SF1-208ENST00000432725 EP400Q96L91 3159 aa21.86■■□□□ 1.09
SF1-208ENST00000432725 CPSF1Q10570 1443 aaKnown RBP21.85■■□□□ 1.09
SF1-208ENST00000432725 NLRP6P59044 892 aa21.84■■□□□ 1.09
SF1-208ENST00000432725 SPATA31A1Q5TZJ5 1347 aa21.83■■□□□ 1.09
SF1-208ENST00000432725 TTC21BQ7Z4L5 1316 aa21.82■■□□□ 1.08
SF1-208ENST00000432725 BLMP54132 1417 aaPredicted RBP21.82■■□□□ 1.08
SF1-208ENST00000432725 SLIT3O75094 1523 aa21.81■■□□□ 1.08
SF1-208ENST00000432725 BRWD3Q6RI45 1802 aa21.81■■□□□ 1.08
SF1-208ENST00000432725 A0A0G2JS52 829 aa21.81■■□□□ 1.08
SF1-208ENST00000432725 MYT1Q01538 1121 aa21.81■■□□□ 1.08
SF1-208ENST00000432725 STRN4Q9NRL3 753 aa21.81■■□□□ 1.08
SF1-208ENST00000432725 CAMTA1Q9Y6Y1 1673 aa21.81■■□□□ 1.08
SF1-208ENST00000432725 TTC21AQ8NDW8 1320 aa21.8■■□□□ 1.08
SF1-208ENST00000432725 USP47Q96K76 1375 aa21.8■■□□□ 1.08
SF1-208ENST00000432725 EVA1CP58658 441 aa21.8■■□□□ 1.08
SF1-208ENST00000432725 PUS7Q96PZ0 661 aaKnown RBP21.8■■□□□ 1.08
SF1-208ENST00000432725 LMO7Q8WWI1 1683 aa21.79■■□□□ 1.08
SF1-208ENST00000432725 PIK3C2AO00443 1686 aa21.79■■□□□ 1.08
SF1-208ENST00000432725 KTN1Q86UP2 1357 aaKnown RBP21.78■■□□□ 1.08
SF1-208ENST00000432725 THSD7AQ9UPZ6 1657 aa21.78■■□□□ 1.08
SF1-208ENST00000432725 TESK2Q96S53 571 aa21.77■■□□□ 1.08
SF1-208ENST00000432725 AKAP12Q02952 1782 aa21.76■■□□□ 1.07
SF1-208ENST00000432725 AATKQ6ZMQ8 1374 aa21.76■■□□□ 1.07
SF1-208ENST00000432725 LARP1Q6PKG0 1096 aaKnown RBP21.76■■□□□ 1.07
SF1-208ENST00000432725 BARGINQ6ZT62 677 aa21.76■■□□□ 1.07
SF1-208ENST00000432725 CD163L1Q9NR16 1453 aa21.76■■□□□ 1.07
SF1-208ENST00000432725 ST20-MTHFSA0A0A6YYL1 179 aa21.75■■□□□ 1.07
SF1-208ENST00000432725 SLC24A1O60721 1099 aa21.75■■□□□ 1.07
SF1-208ENST00000432725 KCNH5Q8NCM2 988 aa21.75■■□□□ 1.07
SF1-208ENST00000432725 COL5A2P05997 1499 aaPredicted RBP21.75■■□□□ 1.07
SF1-208ENST00000432725 SF3B2Q13435 895 aaKnown RBP21.73■■□□□ 1.07
SF1-208ENST00000432725 TMC1Q8TDI8 760 aa21.73■■□□□ 1.07
SF1-208ENST00000432725 SLC12A5Q9H2X9 1139 aa21.73■■□□□ 1.07
SF1-208ENST00000432725 ARHGEF25Q86VW2 580 aa21.72■■□□□ 1.07
SF1-208ENST00000432725 TCP11L2Q8N4U5 519 aa21.72■■□□□ 1.07
SF1-208ENST00000432725 USP35Q9P2H5 1018 aa21.72■■□□□ 1.07
SF1-208ENST00000432725 THRAP3Q9Y2W1 955 aaKnown RBP21.72■■□□□ 1.07
SF1-208ENST00000432725 USP31Q70CQ4 1352 aa21.72■■□□□ 1.07
SF1-208ENST00000432725 HDGFL2Q7Z4V5 671 aaPredicted RBP21.71■■□□□ 1.07
SF1-208ENST00000432725 MON2Q7Z3U7 1717 aa21.7■■□□□ 1.06
SF1-208ENST00000432725 ZBTB7CA1YPR0 619 aa21.7■■□□□ 1.06
SF1-208ENST00000432725 TERF2IPQ9NYB0 399 aa21.7■■□□□ 1.06
SF1-208ENST00000432725 CRB1P82279 1406 aa21.7■■□□□ 1.06
SF1-208ENST00000432725 FAM182BQ5T319 152 aa21.69■■□□□ 1.06
SF1-208ENST00000432725 DEFB132Q7Z7B7 95 aa21.69■■□□□ 1.06
SF1-208ENST00000432725 ZRANB1Q9UGI0 708 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms