RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 CYP4X1Q8N118 509 aa7.73□□□□□ -1.17
CLK1-204ENST00000432425 FAM187AA6NFU0 413 aa7.71□□□□□ -1.18
CLK1-204ENST00000432425 AP1G2O75843 785 aa7.71□□□□□ -1.18
CLK1-204ENST00000432425 SKOR1P84550 965 aa7.71□□□□□ -1.18
CLK1-204ENST00000432425 CTDSPL2Q05D32 466 aa7.71□□□□□ -1.18
CLK1-204ENST00000432425 PKDCCQ504Y2 493 aa7.71□□□□□ -1.18
CLK1-204ENST00000432425 RC3H1Q5TC82 1133 aaKnown RBP7.71□□□□□ -1.18
CLK1-204ENST00000432425 FBXO31Q5XUX0 539 aaPredicted RBP7.71□□□□□ -1.18
CLK1-204ENST00000432425 BAP1Q92560 729 aa7.71□□□□□ -1.18
CLK1-204ENST00000432425 MRGPRX2Q96LB1 330 aa7.7□□□□□ -1.18
CLK1-204ENST00000432425 TTC24A2A3L6 582 aaPredicted RBP7.7□□□□□ -1.18
CLK1-204ENST00000432425 RFC5P40937 340 aa7.7□□□□□ -1.18
CLK1-204ENST00000432425 SH3BP2P78314 561 aa7.7□□□□□ -1.18
CLK1-204ENST00000432425 EHBP1Q8NDI1 1231 aa7.7□□□□□ -1.18
CLK1-204ENST00000432425 DGAT1O75907 488 aa7.69□□□□□ -1.18
CLK1-204ENST00000432425 ZNF511Q8NB15 262 aa7.69□□□□□ -1.18
CLK1-204ENST00000432425 ARMC2Q8NEN0 867 aa7.69□□□□□ -1.18
CLK1-204ENST00000432425 SNIP1Q8TAD8 396 aaKnown RBP7.68□□□□□ -1.18
CLK1-204ENST00000432425 LRRN4Q8WUT4 740 aa7.68□□□□□ -1.18
CLK1-204ENST00000432425 TOR4AQ9NXH8 423 aa7.68□□□□□ -1.18
CLK1-204ENST00000432425 USP17L8P0C7I0 530 aa7.67□□□□□ -1.18
CLK1-204ENST00000432425 TMEM259Q4ZIN3 620 aa7.67□□□□□ -1.18
CLK1-204ENST00000432425 NBPF14Q5TI25 921 aa7.67□□□□□ -1.18
CLK1-204ENST00000432425 TRAF7Q6Q0C0 670 aa7.67□□□□□ -1.18
CLK1-204ENST00000432425 VARSP26640 1264 aaKnown RBP7.65□□□□□ -1.18
CLK1-204ENST00000432425 AGERQ15109 404 aa7.65□□□□□ -1.18
CLK1-204ENST00000432425 NR6A1Q15406 480 aa7.64□□□□□ -1.19
CLK1-204ENST00000432425 ALDH1A1P00352 501 aa7.63□□□□□ -1.19
CLK1-204ENST00000432425 PNMA1Q8ND90 353 aa7.63□□□□□ -1.19
CLK1-204ENST00000432425 GPKOWQ92917 476 aaPredicted RBP eCLIP7.63□□□□□ -1.192e-12■□□□□ 8.8
CLK1-204ENST00000432425 FOXJ1Q92949 421 aa7.63□□□□□ -1.19
CLK1-204ENST00000432425 BPHLQ86WA6 291 aaPredicted RBP7.63□□□□□ -1.19
CLK1-204ENST00000432425 FAM174AQ8TBP5 190 aa7.63□□□□□ -1.19
CLK1-204ENST00000432425 J3QL48 77 aa7.62□□□□□ -1.19
CLK1-204ENST00000432425 SIAH2O43255 324 aa7.62□□□□□ -1.19
CLK1-204ENST00000432425 SMPD1P17405 629 aa7.62□□□□□ -1.19
CLK1-204ENST00000432425 MYT1Q01538 1121 aa7.62□□□□□ -1.19
CLK1-204ENST00000432425 FKBPLQ9UIM3 349 aa7.62□□□□□ -1.19
CLK1-204ENST00000432425 WASF2Q9Y6W5 498 aa7.61□□□□□ -1.19
CLK1-204ENST00000432425 LCE2BO14633 110 aa7.6□□□□□ -1.19
CLK1-204ENST00000432425 HMX1Q9NP08 348 aaPredicted RBP7.6□□□□□ -1.19
CLK1-204ENST00000432425 TLL2Q9Y6L7 1015 aa7.6□□□□□ -1.19
CLK1-204ENST00000432425 ZC3H4Q9UPT8 1303 aaKnown RBP7.6□□□□□ -1.19
CLK1-204ENST00000432425 MAGEB6P1A0A0J9YX57 407 aa7.59□□□□□ -1.19
CLK1-204ENST00000432425 AVPP01185 164 aa7.59□□□□□ -1.19
CLK1-204ENST00000432425 PDXDC2PQ6P474 469 aa7.59□□□□□ -1.19
CLK1-204ENST00000432425 EPS8L1Q8TE68 723 aa7.59□□□□□ -1.19
CLK1-204ENST00000432425 CARD14Q9BXL6 1004 aa7.59□□□□□ -1.19
CLK1-204ENST00000432425 ARID5BQ14865 1188 aa7.58□□□□□ -1.2
CLK1-204ENST00000432425 CTC1Q2NKJ3 1217 aa7.58□□□□□ -1.2
CLK1-204ENST00000432425 C4orf48Q5BLP8 95 aa7.58□□□□□ -1.2
CLK1-204ENST00000432425 SH3BP5LQ7L8J4 393 aa7.58□□□□□ -1.2
CLK1-204ENST00000432425 MPNDQ8N594 471 aa7.58□□□□□ -1.2
CLK1-204ENST00000432425 BANK1Q8NDB2 785 aa7.58□□□□□ -1.2
CLK1-204ENST00000432425 ARHGAP9Q9BRR9 750 aa7.58□□□□□ -1.2
CLK1-204ENST00000432425 AXIN1O15169 862 aa7.57□□□□□ -1.2
CLK1-204ENST00000432425 ST8SIA5O15466 376 aa7.57□□□□□ -1.2
CLK1-204ENST00000432425 SH3RF1Q7Z6J0 888 aa7.57□□□□□ -1.2
CLK1-204ENST00000432425 HPS1Q92902 700 aa7.57□□□□□ -1.2
CLK1-204ENST00000432425 PTK2Q05397 1052 aa7.57□□□□□ -1.2
CLK1-204ENST00000432425 CRIPAKQ8N1N5 446 aa7.57□□□□□ -1.2
CLK1-204ENST00000432425 AAASQ9NRG9 546 aa7.57□□□□□ -1.2
CLK1-204ENST00000432425 APBB1O00213 710 aa7.56□□□□□ -1.2
CLK1-204ENST00000432425 ZBTB33Q86T24 672 aa7.56□□□□□ -1.2
CLK1-204ENST00000432425 C1QTNF2Q9BXJ5 285 aa7.56□□□□□ -1.2
CLK1-204ENST00000432425 ADH1CP00326 375 aa7.55□□□□□ -1.2
CLK1-204ENST00000432425 SMCPP49901 116 aaPredicted RBP7.55□□□□□ -1.2
CLK1-204ENST00000432425 CDK15Q96Q40 435 aa7.55□□□□□ -1.2
CLK1-204ENST00000432425 TRIM34Q9BYJ4 488 aa7.55□□□□□ -1.2
CLK1-204ENST00000432425 GPSM3Q9Y4H4 160 aa7.55□□□□□ -1.2
CLK1-204ENST00000432425 NNTQ13423 1086 aa7.54□□□□□ -1.2
CLK1-204ENST00000432425 ERFEQ4G0M1 354 aa7.54□□□□□ -1.2
CLK1-204ENST00000432425 VASH1Q7L8A9 365 aaPredicted RBP7.54□□□□□ -1.2
CLK1-204ENST00000432425 TRMT44Q8IYL2 757 aaKnown RBP7.54□□□□□ -1.2
CLK1-204ENST00000432425 SLC10A4Q96EP9 437 aa7.54□□□□□ -1.2
CLK1-204ENST00000432425 GJD4Q96KN9 370 aaPredicted RBP7.54□□□□□ -1.2
CLK1-204ENST00000432425 SOCS7O14512 581 aa7.53□□□□□ -1.2
CLK1-204ENST00000432425 SNRKQ9NRH2 765 aa7.53□□□□□ -1.2
CLK1-204ENST00000432425 MAP4K5Q9Y4K4 846 aa7.53□□□□□ -1.2
CLK1-204ENST00000432425 MTMR14Q8NCE2 650 aa7.52□□□□□ -1.21
CLK1-204ENST00000432425 NDUFB9Q9Y6M9 179 aa7.52□□□□□ -1.21
CLK1-204ENST00000432425 FSHRP23945 695 aa7.51□□□□□ -1.21
CLK1-204ENST00000432425 NR5A1Q13285 461 aa7.51□□□□□ -1.21
CLK1-204ENST00000432425 ZNF787Q6DD87 383 aa7.51□□□□□ -1.21
CLK1-204ENST00000432425 ADAM32Q8TC27 787 aa7.51□□□□□ -1.21
CLK1-204ENST00000432425 CDV3Q9UKY7 258 aaKnown RBP7.51□□□□□ -1.21
CLK1-204ENST00000432425 CAPN5O15484 640 aaPredicted RBP7.5□□□□□ -1.21
CLK1-204ENST00000432425 OCSTAMPQ9BR26 566 aa7.5□□□□□ -1.21
CLK1-204ENST00000432425 PRM3Q9NNZ6 103 aa7.5□□□□□ -1.21
CLK1-204ENST00000432425 ZBBXA8MT70 800 aa7.49□□□□□ -1.21
CLK1-204ENST00000432425 GRM5P41594 1212 aa7.49□□□□□ -1.21
CLK1-204ENST00000432425 WDR4P57081 412 aaKnown RBP7.49□□□□□ -1.21
CLK1-204ENST00000432425 DACH1Q9UI36 760 aa7.49□□□□□ -1.21
CLK1-204ENST00000432425 TMEM132AQ24JP5 1023 aa7.48□□□□□ -1.21
CLK1-204ENST00000432425 DZIP3Q86Y13 1208 aaKnown RBP7.48□□□□□ -1.21
CLK1-204ENST00000432425 ATP13A2Q9NQ11 1180 aa7.48□□□□□ -1.21
CLK1-204ENST00000432425 NR3C2P08235 984 aa7.47□□□□□ -1.21
CLK1-204ENST00000432425 TIMP2P16035 220 aa7.47□□□□□ -1.21
CLK1-204ENST00000432425 KCTD15Q96SI1 283 aaPredicted RBP7.47□□□□□ -1.21
CLK1-204ENST00000432425 NBPF20Q3BBV1 942 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms