RNA–Protein interactions for RNA: ENST00000431873.6

ALK-202, Transcript of ALK receptor tyrosine kinase, humanhuman

TSL 5

Gene ALK, Length 2,520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-202ENST00000431873 U2AF1Q01081 240 aaKnown RBP eCLIP12.39□□□□□ -0.43
ALK-202ENST00000431873 L1TD1Q5T7N2 865 aaKnown RBP12.39□□□□□ -0.43
ALK-202ENST00000431873 SLC52A1Q9NWF4 448 aa12.39□□□□□ -0.43
ALK-202ENST00000431873 ARHGEF28Q8N1W1 1705 aaKnown RBP12.38□□□□□ -0.43
ALK-202ENST00000431873 DIP2CQ9Y2E4 1556 aa12.38□□□□□ -0.43
ALK-202ENST00000431873 FTSJ3Q8IY81 847 aaKnown RBP12.38□□□□□ -0.43
ALK-202ENST00000431873 SIGLEC1Q9BZZ2 1709 aa12.38□□□□□ -0.43
ALK-202ENST00000431873 TULP4Q9NRJ4 1543 aa12.38□□□□□ -0.43
ALK-202ENST00000431873 HDAC1Q13547 482 aaPredicted RBP12.38□□□□□ -0.43
ALK-202ENST00000431873 CFAP65Q6ZU64 1925 aaKnown RBP12.37□□□□□ -0.43
ALK-202ENST00000431873 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.36□□□□□ -0.43
ALK-202ENST00000431873 DDX19BQ9UMR2 479 aa12.36□□□□□ -0.43
ALK-202ENST00000431873 RAPGEF3O95398 923 aa12.35□□□□□ -0.43
ALK-202ENST00000431873 C22orf23Q9BZE7 217 aa12.35□□□□□ -0.43
ALK-202ENST00000431873 IL16Q14005 1332 aa12.35□□□□□ -0.43
ALK-202ENST00000431873 IDI1Q13907 227 aa12.35□□□□□ -0.43
ALK-202ENST00000431873 SMC4Q9NTJ3 1288 aa12.35□□□□□ -0.43
ALK-202ENST00000431873 ABCC11Q96J66 1382 aa12.34□□□□□ -0.43
ALK-202ENST00000431873 TRIM27P14373 513 aa12.34□□□□□ -0.43
ALK-202ENST00000431873 SMC5Q8IY18 1101 aa12.34□□□□□ -0.43
ALK-202ENST00000431873 PLEKHF1Q96S99 279 aa12.34□□□□□ -0.43
ALK-202ENST00000431873 MCM4P33991 863 aa12.34□□□□□ -0.43
ALK-202ENST00000431873 TMPOP42166 694 aaKnown RBP12.34□□□□□ -0.43
ALK-202ENST00000431873 EXOSC9Q06265 439 aaKnown RBP12.34□□□□□ -0.43
ALK-202ENST00000431873 ATF7IPQ6VMQ6 1270 aa12.34□□□□□ -0.43
ALK-202ENST00000431873 TSR2Q969E8 191 aaKnown RBP12.34□□□□□ -0.43
ALK-202ENST00000431873 RICTORQ6R327 1708 aa12.33□□□□□ -0.44
ALK-202ENST00000431873 RSPH6AQ9H0K4 717 aa12.33□□□□□ -0.44
ALK-202ENST00000431873 CHMP5Q9NZZ3 219 aa12.33□□□□□ -0.44
ALK-202ENST00000431873 ATAD2Q6PL18 1390 aa12.33□□□□□ -0.44
ALK-202ENST00000431873 MED14O60244 1454 aa12.33□□□□□ -0.44
ALK-202ENST00000431873 SSH1Q8WYL5 1049 aa12.33□□□□□ -0.44
ALK-202ENST00000431873 TRIM35Q9UPQ4 493 aa12.33□□□□□ -0.44
ALK-202ENST00000431873 FSD2A1L4K1 749 aa12.32□□□□□ -0.44
ALK-202ENST00000431873 CABP2Q9NPB3 220 aa12.32□□□□□ -0.44
ALK-202ENST00000431873 COL3A1P02461 1466 aaPredicted RBP12.31□□□□□ -0.44
ALK-202ENST00000431873 ITPRIPQ8IWB1 547 aa12.31□□□□□ -0.44
ALK-202ENST00000431873 TMEM131LA2VDJ0 1609 aa12.31□□□□□ -0.44
ALK-202ENST00000431873 MFAP1P55081 439 aaKnown RBP12.31□□□□□ -0.44
ALK-202ENST00000431873 ZBTB40Q9NUA8 1239 aa12.31□□□□□ -0.44
ALK-202ENST00000431873 A0A1W2PP64 1363 aa12.31□□□□□ -0.44
ALK-202ENST00000431873 IPO8O15397 1037 aaKnown RBP12.3□□□□□ -0.44
ALK-202ENST00000431873 TERF2IPQ9NYB0 399 aa12.3□□□□□ -0.44
ALK-202ENST00000431873 PTPRMP28827 1452 aa12.3□□□□□ -0.44
ALK-202ENST00000431873 KIF16BQ96L93 1317 aa12.3□□□□□ -0.44
ALK-202ENST00000431873 GOLGA6L3A6NEY3 463 aa12.3□□□□□ -0.44
ALK-202ENST00000431873 U2SURPO15042 1029 aaKnown RBP12.3□□□□□ -0.44
ALK-202ENST00000431873 NUTM2DQ5VT03 806 aaPredicted RBP12.3□□□□□ -0.44
ALK-202ENST00000431873 NOB1Q9ULX3 412 aaKnown RBP12.3□□□□□ -0.44
ALK-202ENST00000431873 CLTCQ00610 1675 aaKnown RBP12.29□□□□□ -0.44
ALK-202ENST00000431873 PREX1Q8TCU6 1659 aa12.29□□□□□ -0.44
ALK-202ENST00000431873 SRPK2P78362 688 aaKnown RBP12.29□□□□□ -0.44
ALK-202ENST00000431873 XRCC6P12956 609 aaKnown RBP eCLIP12.28□□□□□ -0.44
ALK-202ENST00000431873 RBM25P49756 843 aaKnown RBP12.28□□□□□ -0.44
ALK-202ENST00000431873 HSCBQ8IWL3 235 aa12.28□□□□□ -0.44
ALK-202ENST00000431873 TMEM57Q8N5G2 664 aa12.28□□□□□ -0.44
ALK-202ENST00000431873 PNNQ9H307 717 aaKnown RBP12.28□□□□□ -0.44
ALK-202ENST00000431873 YTHDC2Q9H6S0 1430 aaKnown RBP12.28□□□□□ -0.44
ALK-202ENST00000431873 YEATS2Q9ULM3 1422 aa12.28□□□□□ -0.44
ALK-202ENST00000431873 NUCB1Q02818 461 aa12.28□□□□□ -0.44
ALK-202ENST00000431873 ALDH1L2Q3SY69 923 aa12.28□□□□□ -0.44
ALK-202ENST00000431873 SPRYD3Q8NCJ5 442 aa12.28□□□□□ -0.44
ALK-202ENST00000431873 NCOA3Q9Y6Q9 1424 aa12.28□□□□□ -0.44
ALK-202ENST00000431873 TRAK2O60296 914 aa12.27□□□□□ -0.45
ALK-202ENST00000431873 SNX21Q969T3 373 aa12.27□□□□□ -0.45
ALK-202ENST00000431873 ZNF692Q9BU19 519 aaPredicted RBP12.27□□□□□ -0.45
ALK-202ENST00000431873 GGNBP2Q9H3C7 697 aa12.27□□□□□ -0.45
ALK-202ENST00000431873 ANKRD26Q9UPS8 1709 aa12.27□□□□□ -0.45
ALK-202ENST00000431873 PNPLA6Q8IY17 1366 aa12.27□□□□□ -0.45
ALK-202ENST00000431873 FYB1O15117 783 aa12.27□□□□□ -0.45
ALK-202ENST00000431873 RIPK4P57078 832 aa12.27□□□□□ -0.45
ALK-202ENST00000431873 ZNF428Q96B54 188 aa12.27□□□□□ -0.45
ALK-202ENST00000431873 DDX11L8A8MPP1 907 aa12.26□□□□□ -0.45
ALK-202ENST00000431873 DDIT3P35638 169 aa12.26□□□□□ -0.45
ALK-202ENST00000431873 BRPF1P55201 1214 aaPredicted RBP12.26□□□□□ -0.45
ALK-202ENST00000431873 RRAGDQ9NQL2 400 aaPredicted RBP12.26□□□□□ -0.45
ALK-202ENST00000431873 STK26Q9P289 416 aa12.26□□□□□ -0.45
ALK-202ENST00000431873 PPP6R1Q9UPN7 881 aa12.26□□□□□ -0.45
ALK-202ENST00000431873 CD163L1Q9NR16 1453 aa12.26□□□□□ -0.45
ALK-202ENST00000431873 PRAM1Q96QH2 718 aa12.26□□□□□ -0.45
ALK-202ENST00000431873 DIAPH1O60610 1272 aaKnown RBP12.25□□□□□ -0.45
ALK-202ENST00000431873 SAFB2Q14151 953 aaKnown RBP eCLIP12.25□□□□□ -0.45
ALK-202ENST00000431873 HDGFL2Q7Z4V5 671 aaPredicted RBP12.25□□□□□ -0.45
ALK-202ENST00000431873 ISY1Q9ULR0 285 aaKnown RBP12.25□□□□□ -0.45
ALK-202ENST00000431873 FCHSD2O94868 740 aa12.24□□□□□ -0.45
ALK-202ENST00000431873 MRE11P49959 708 aa12.24□□□□□ -0.45
ALK-202ENST00000431873 BMP2KLQ5H9B9 411 aa12.24□□□□□ -0.45
ALK-202ENST00000431873 CHD1LQ86WJ1 897 aa12.24□□□□□ -0.45
ALK-202ENST00000431873 CIZ1Q9ULV3 898 aaPredicted RBP12.24□□□□□ -0.45
ALK-202ENST00000431873 ALKQ9UM73 1620 aa12.24□□□□□ -0.45
ALK-202ENST00000431873 MYO5BQ9ULV0 1848 aa12.24□□□□□ -0.45
ALK-202ENST00000431873 GZF1Q9H116 711 aaPredicted RBP12.24□□□□□ -0.45
ALK-202ENST00000431873 CHMP4BQ9H444 224 aaKnown RBP12.24□□□□□ -0.45
ALK-202ENST00000431873 PPIP5K1Q6PFW1 1433 aa12.23□□□□□ -0.45
ALK-202ENST00000431873 ARHGEF40Q8TER5 1519 aa12.23□□□□□ -0.45
ALK-202ENST00000431873 CDC42BPGQ6DT37 1551 aa12.23□□□□□ -0.45
ALK-202ENST00000431873 DLC1Q96QB1 1528 aa12.23□□□□□ -0.45
ALK-202ENST00000431873 MINK1Q8N4C8 1332 aaPredicted RBP12.23□□□□□ -0.45
ALK-202ENST00000431873 REREQ9P2R6 1566 aa12.22□□□□□ -0.45
ALK-202ENST00000431873 LNPKQ9C0E8 428 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms